data_8E7R # _model_server_result.job_id i1_ZRJl6V1kFJtnNorGYvg _model_server_result.datetime_utc '2024-11-13 17:57:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8e7r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":203}' # _entry.id 8E7R # _exptl.entry_id 8E7R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8E7R _cell.length_a 64.674 _cell.length_b 67.831 _cell.length_c 69.738 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8E7R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 7 A HIS 7 1_555 M ZN ZN . B ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc2 A NE2 HIS 66 A HIS 66 1_555 I ZN ZN . A ZN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc3 A OE1 GLU 115 A GLU 115 1_555 I ZN ZN . A ZN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc4 C O1P PAE . A PAE 201 1_555 I ZN ZN . A ZN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.894 ? metalc ? metalc5 I ZN ZN . A ZN 207 1_555 B NE2 HIS 7 B HIS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc6 N O HOH . A HOH 307 1_555 K MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc7 N O HOH . A HOH 336 3_544 L MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.836 ? metalc ? metalc8 N O HOH . A HOH 369 2_455 K MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? metalc ? metalc9 N O HOH . A HOH 396 3_544 L MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc10 B NE2 HIS 66 B HIS 66 1_555 M ZN ZN . B ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc11 B OE2 GLU 72 B GLU 72 1_555 K MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? metalc ? metalc12 B OE1 GLU 115 B GLU 115 1_555 M ZN ZN . B ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc13 J O3P PAE . B PAE 201 1_555 M ZN ZN . B ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.909 ? metalc ? metalc14 K MG MG . B MG 202 1_555 O O HOH . B HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc15 K MG MG . B MG 202 1_555 O O HOH . B HOH 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc16 K MG MG . B MG 202 1_555 O O HOH . B HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? metalc ? metalc17 L MG MG . B MG 203 1_555 O O HOH . B HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc18 L MG MG . B MG 203 1_555 O O HOH . B HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc19 L MG MG . B MG 203 1_555 O O HOH . B HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc20 L MG MG . B MG 203 1_555 O O HOH . B HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 8E7R _atom_sites.fract_transf_matrix[1][1] 0.015462 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014743 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014339 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PAE A 1 201 202 PAE PPA . D 3 FMT A 1 202 230 FMT FMT . E 3 FMT A 1 203 243 FMT FMT . F 3 FMT A 1 204 222 FMT FMT . G 3 FMT A 1 205 13 FMT FMT . H 3 FMT A 1 206 27 FMT FMT . I 4 ZN A 1 207 1 ZN ZN . J 2 PAE B 1 201 202 PAE PPA . K 5 MG B 1 202 1 MG MG . L 5 MG B 1 203 3 MG MG . M 4 ZN B 1 204 2 ZN ZN . N 6 HOH A 1 301 257 HOH HOH . N 6 HOH A 2 302 49 HOH HOH . N 6 HOH A 3 303 141 HOH HOH . N 6 HOH A 4 304 32 HOH HOH . N 6 HOH A 5 305 11 HOH HOH . N 6 HOH A 6 306 105 HOH HOH . N 6 HOH A 7 307 250 HOH HOH . N 6 HOH A 8 308 46 HOH HOH . N 6 HOH A 9 309 95 HOH HOH . N 6 HOH A 10 310 30 HOH HOH . N 6 HOH A 11 311 45 HOH HOH . N 6 HOH A 12 312 51 HOH HOH . N 6 HOH A 13 313 200 HOH HOH . N 6 HOH A 14 314 116 HOH HOH . N 6 HOH A 15 315 44 HOH HOH . N 6 HOH A 16 316 66 HOH HOH . N 6 HOH A 17 317 2 HOH HOH . N 6 HOH A 18 318 84 HOH HOH . N 6 HOH A 19 319 43 HOH HOH . N 6 HOH A 20 320 104 HOH HOH . N 6 HOH A 21 321 97 HOH HOH . N 6 HOH A 22 322 79 HOH HOH . N 6 HOH A 23 323 68 HOH HOH . N 6 HOH A 24 324 125 HOH HOH . N 6 HOH A 25 325 146 HOH HOH . N 6 HOH A 26 326 59 HOH HOH . N 6 HOH A 27 327 71 HOH HOH . N 6 HOH A 28 328 72 HOH HOH . N 6 HOH A 29 329 8 HOH HOH . N 6 HOH A 30 330 132 HOH HOH . N 6 HOH A 31 331 152 HOH HOH . N 6 HOH A 32 332 77 HOH HOH . N 6 HOH A 33 333 64 HOH HOH . N 6 HOH A 34 334 137 HOH HOH . N 6 HOH A 35 335 119 HOH HOH . N 6 HOH A 36 336 252 HOH HOH . N 6 HOH A 37 337 124 HOH HOH . N 6 HOH A 38 338 75 HOH HOH . N 6 HOH A 39 339 261 HOH HOH . N 6 HOH A 40 340 46 HOH HOH . N 6 HOH A 41 341 32 HOH HOH . N 6 HOH A 42 342 63 HOH HOH . N 6 HOH A 43 343 12 HOH HOH . N 6 HOH A 44 344 136 HOH HOH . N 6 HOH A 45 345 65 HOH HOH . N 6 HOH A 46 346 67 HOH HOH . N 6 HOH A 47 347 121 HOH HOH . N 6 HOH A 48 348 241 HOH HOH . N 6 HOH A 49 349 134 HOH HOH . N 6 HOH A 50 350 40 HOH HOH . N 6 HOH A 51 351 109 HOH HOH . N 6 HOH A 52 352 5 HOH HOH . N 6 HOH A 53 353 144 HOH HOH . N 6 HOH A 54 354 25 HOH HOH . N 6 HOH A 55 355 38 HOH HOH . N 6 HOH A 56 356 39 HOH HOH . N 6 HOH A 57 357 42 HOH HOH . N 6 HOH A 58 358 96 HOH HOH . N 6 HOH A 59 359 224 HOH HOH . N 6 HOH A 60 360 85 HOH HOH . N 6 HOH A 61 361 102 HOH HOH . N 6 HOH A 62 362 123 HOH HOH . N 6 HOH A 63 363 203 HOH HOH . N 6 HOH A 64 364 55 HOH HOH . N 6 HOH A 65 365 114 HOH HOH . N 6 HOH A 66 366 113 HOH HOH . N 6 HOH A 67 367 43 HOH HOH . N 6 HOH A 68 368 20 HOH HOH . N 6 HOH A 69 369 249 HOH HOH . N 6 HOH A 70 370 33 HOH HOH . N 6 HOH A 71 371 103 HOH HOH . N 6 HOH A 72 372 55 HOH HOH . N 6 HOH A 73 373 63 HOH HOH . N 6 HOH A 74 374 118 HOH HOH . N 6 HOH A 75 375 41 HOH HOH . N 6 HOH A 76 376 115 HOH HOH . N 6 HOH A 77 377 83 HOH HOH . N 6 HOH A 78 378 140 HOH HOH . N 6 HOH A 79 379 220 HOH HOH . N 6 HOH A 80 380 18 HOH HOH . N 6 HOH A 81 381 112 HOH HOH . N 6 HOH A 82 382 133 HOH HOH . N 6 HOH A 83 383 117 HOH HOH . N 6 HOH A 84 384 78 HOH HOH . N 6 HOH A 85 385 13 HOH HOH . N 6 HOH A 86 386 145 HOH HOH . N 6 HOH A 87 387 142 HOH HOH . N 6 HOH A 88 388 44 HOH HOH . N 6 HOH A 89 389 27 HOH HOH . N 6 HOH A 90 390 51 HOH HOH . N 6 HOH A 91 391 228 HOH HOH . N 6 HOH A 92 392 64 HOH HOH . N 6 HOH A 93 393 67 HOH HOH . N 6 HOH A 94 394 52 HOH HOH . N 6 HOH A 95 395 143 HOH HOH . N 6 HOH A 96 396 253 HOH HOH . N 6 HOH A 97 397 227 HOH HOH . N 6 HOH A 98 398 54 HOH HOH . N 6 HOH A 99 399 147 HOH HOH . O 6 HOH B 1 301 58 HOH HOH . O 6 HOH B 2 302 101 HOH HOH . O 6 HOH B 3 303 70 HOH HOH . O 6 HOH B 4 304 53 HOH HOH . O 6 HOH B 5 305 1 HOH HOH . O 6 HOH B 6 306 209 HOH HOH . O 6 HOH B 7 307 255 HOH HOH . O 6 HOH B 8 308 154 HOH HOH . O 6 HOH B 9 309 163 HOH HOH . O 6 HOH B 10 310 4 HOH HOH . O 6 HOH B 11 311 251 HOH HOH . O 6 HOH B 12 312 178 HOH HOH . O 6 HOH B 13 313 235 HOH HOH . O 6 HOH B 14 314 199 HOH HOH . O 6 HOH B 15 315 246 HOH HOH . O 6 HOH B 16 316 61 HOH HOH . O 6 HOH B 17 317 54 HOH HOH . O 6 HOH B 18 318 23 HOH HOH . O 6 HOH B 19 319 35 HOH HOH . O 6 HOH B 20 320 254 HOH HOH . O 6 HOH B 21 321 170 HOH HOH . O 6 HOH B 22 322 126 HOH HOH . O 6 HOH B 23 323 158 HOH HOH . O 6 HOH B 24 324 74 HOH HOH . O 6 HOH B 25 325 31 HOH HOH . O 6 HOH B 26 326 185 HOH HOH . O 6 HOH B 27 327 91 HOH HOH . O 6 HOH B 28 328 48 HOH HOH . O 6 HOH B 29 329 57 HOH HOH . O 6 HOH B 30 330 233 HOH HOH . O 6 HOH B 31 331 17 HOH HOH . O 6 HOH B 32 332 92 HOH HOH . O 6 HOH B 33 333 161 HOH HOH . O 6 HOH B 34 334 38 HOH HOH . O 6 HOH B 35 335 36 HOH HOH . O 6 HOH B 36 336 45 HOH HOH . O 6 HOH B 37 337 21 HOH HOH . O 6 HOH B 38 338 39 HOH HOH . O 6 HOH B 39 339 192 HOH HOH . O 6 HOH B 40 340 30 HOH HOH . O 6 HOH B 41 341 260 HOH HOH . O 6 HOH B 42 342 6 HOH HOH . O 6 HOH B 43 343 129 HOH HOH . O 6 HOH B 44 344 258 HOH HOH . O 6 HOH B 45 345 14 HOH HOH . O 6 HOH B 46 346 33 HOH HOH . O 6 HOH B 47 347 68 HOH HOH . O 6 HOH B 48 348 56 HOH HOH . O 6 HOH B 49 349 160 HOH HOH . O 6 HOH B 50 350 14 HOH HOH . O 6 HOH B 51 351 15 HOH HOH . O 6 HOH B 52 352 127 HOH HOH . O 6 HOH B 53 353 108 HOH HOH . O 6 HOH B 54 354 88 HOH HOH . O 6 HOH B 55 355 11 HOH HOH . O 6 HOH B 56 356 41 HOH HOH . O 6 HOH B 57 357 169 HOH HOH . O 6 HOH B 58 358 128 HOH HOH . O 6 HOH B 59 359 40 HOH HOH . O 6 HOH B 60 360 155 HOH HOH . O 6 HOH B 61 361 35 HOH HOH . O 6 HOH B 62 362 195 HOH HOH . O 6 HOH B 63 363 34 HOH HOH . O 6 HOH B 64 364 100 HOH HOH . O 6 HOH B 65 365 171 HOH HOH . O 6 HOH B 66 366 180 HOH HOH . O 6 HOH B 67 367 259 HOH HOH . O 6 HOH B 68 368 37 HOH HOH . O 6 HOH B 69 369 50 HOH HOH . O 6 HOH B 70 370 89 HOH HOH . O 6 HOH B 71 371 245 HOH HOH . O 6 HOH B 72 372 179 HOH HOH . O 6 HOH B 73 373 18 HOH HOH . O 6 HOH B 74 374 175 HOH HOH . O 6 HOH B 75 375 13 HOH HOH . O 6 HOH B 76 376 93 HOH HOH . O 6 HOH B 77 377 90 HOH HOH . O 6 HOH B 78 378 177 HOH HOH . O 6 HOH B 79 379 176 HOH HOH . O 6 HOH B 80 380 49 HOH HOH . O 6 HOH B 81 381 47 HOH HOH . O 6 HOH B 82 382 159 HOH HOH . O 6 HOH B 83 383 34 HOH HOH . O 6 HOH B 84 384 19 HOH HOH . O 6 HOH B 85 385 135 HOH HOH . O 6 HOH B 86 386 225 HOH HOH . O 6 HOH B 87 387 31 HOH HOH . O 6 HOH B 88 388 186 HOH HOH . O 6 HOH B 89 389 16 HOH HOH . O 6 HOH B 90 390 48 HOH HOH . O 6 HOH B 91 391 69 HOH HOH . O 6 HOH B 92 392 162 HOH HOH . O 6 HOH B 93 393 23 HOH HOH . O 6 HOH B 94 394 99 HOH HOH . O 6 HOH B 95 395 156 HOH HOH . O 6 HOH B 96 396 28 HOH HOH . O 6 HOH B 97 397 58 HOH HOH . O 6 HOH B 98 398 47 HOH HOH . O 6 HOH B 99 399 56 HOH HOH . O 6 HOH B 100 400 12 HOH HOH . O 6 HOH B 101 401 256 HOH HOH . O 6 HOH B 102 402 247 HOH HOH . O 6 HOH B 103 403 24 HOH HOH . O 6 HOH B 104 404 42 HOH HOH . O 6 HOH B 105 405 53 HOH HOH . O 6 HOH B 106 406 66 HOH HOH . O 6 HOH B 107 407 15 HOH HOH . O 6 HOH B 108 408 194 HOH HOH . O 6 HOH B 109 409 226 HOH HOH . O 6 HOH B 110 410 201 HOH HOH . O 6 HOH B 111 411 184 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . E 3 -9.355 13.105 -21.756 1 40.11 0 C FMT 203 A 1 HETATM 2 O O1 FMT . . . E 3 -8.779 12.771 -20.737 1 31.98 0 O1 FMT 203 A 1 HETATM 3 O O2 FMT . . . E 3 -9.924 14.333 -21.972 1 40.31 0 O2 FMT 203 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 3 #