data_8E7Y
#
_model_server_result.job_id            AsdGHVbz1uVCetAjuxi-jQ 
_model_server_result.datetime_utc      '2024-11-07 08:55:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8e7y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":205}' 
#
_entry.id    8E7Y 
#
_exptl.entry_id    8E7Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8E7Y 
_cell.length_a            40.11 
_cell.length_b            95.35 
_cell.length_c            105.55 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8E7Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 J N N 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     8E7Y 
_atom_sites.fract_transf_matrix[1][1]    0.024931 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010488 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009474 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 OLC B 1 201 201 OLC OLC . 
D 2 OLC B 1 202 204 OLC OLC . 
E 3 HEM B 1 203 1 HEM HEM . 
F 2 OLC A 1 201 202 OLC OLC . 
G 2 OLC A 1 202 203 OLC OLC . 
H 2 OLC A 1 203 201 OLC OLC . 
I 2 OLC A 1 204 202 OLC OLC . 
J 3 HEM A 1 205 1 HEM HEM . 
K 4 HOH B 1 301 7 HOH HOH . 
K 4 HOH B 2 302 13 HOH HOH . 
K 4 HOH B 3 303 8 HOH HOH . 
K 4 HOH B 4 304 14 HOH HOH . 
K 4 HOH B 5 305 6 HOH HOH . 
K 4 HOH B 6 306 3 HOH HOH . 
L 4 HOH A 1 301 15 HOH HOH . 
L 4 HOH A 2 302 4 HOH HOH . 
L 4 HOH A 3 303 5 HOH HOH . 
L 4 HOH A 4 304 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . J 3 -14.429 12.739 -3.391 1 57.08 ? CHA HEM 205 A 1 
HETATM 2 C CHB HEM . . . J 3 -15.584 9.991 -7.226 1 46.51 ? CHB HEM 205 A 1 
HETATM 3 C CHC HEM . . . J 3 -20.22 11.318 -6.679 1 46.53 ? CHC HEM 205 A 1 
HETATM 4 C CHD HEM . . . J 3 -18.811 14.805 -3.608 1 57.92 ? CHD HEM 205 A 1 
HETATM 5 C C1A HEM . . . J 3 -14.329 11.859 -4.449 1 58.6 ? C1A HEM 205 A 1 
HETATM 6 C C2A HEM . . . J 3 -13.129 11.173 -4.892 1 56.2 ? C2A HEM 205 A 1 
HETATM 7 C C3A HEM . . . J 3 -13.449 10.417 -5.946 1 55.93 ? C3A HEM 205 A 1 
HETATM 8 C C4A HEM . . . J 3 -14.863 10.59 -6.215 1 51.19 ? C4A HEM 205 A 1 
HETATM 9 C CMA HEM . . . J 3 -12.484 9.511 -6.741 1 54.01 ? CMA HEM 205 A 1 
HETATM 10 C CAA HEM . . . J 3 -11.729 11.298 -4.254 1 53.71 ? CAA HEM 205 A 1 
HETATM 11 C CBA HEM . . . J 3 -11.731 10.659 -2.871 1 64.78 ? CBA HEM 205 A 1 
HETATM 12 C CGA HEM . . . J 3 -10.342 10.7 -2.288 1 69.9 ? CGA HEM 205 A 1 
HETATM 13 O O1A HEM . . . J 3 -9.876 9.642 -1.794 1 76.15 ? O1A HEM 205 A 1 
HETATM 14 O O2A HEM . . . J 3 -9.7 11.784 -2.319 1 69.47 ? O2A HEM 205 A 1 
HETATM 15 C C1B HEM . . . J 3 -16.951 10.072 -7.398 1 50.76 ? C1B HEM 205 A 1 
HETATM 16 C C2B HEM . . . J 3 -17.742 9.308 -8.34 1 51.51 ? C2B HEM 205 A 1 
HETATM 17 C C3B HEM . . . J 3 -19.03 9.681 -8.196 1 50.92 ? C3B HEM 205 A 1 
HETATM 18 C C4B HEM . . . J 3 -19.088 10.681 -7.146 1 48.31 ? C4B HEM 205 A 1 
HETATM 19 C CMB HEM . . . J 3 -17.135 8.276 -9.319 1 53.06 ? CMB HEM 205 A 1 
HETATM 20 C CAB HEM . . . J 3 -20.29 9.177 -8.939 1 48.31 ? CAB HEM 205 A 1 
HETATM 21 C CBB HEM . . . J 3 -20.327 8.071 -9.69 1 52.81 ? CBB HEM 205 A 1 
HETATM 22 C C1C HEM . . . J 3 -20.247 12.428 -5.856 1 53.28 ? C1C HEM 205 A 1 
HETATM 23 C C2C HEM . . . J 3 -21.392 13.283 -5.586 1 50.18 ? C2C HEM 205 A 1 
HETATM 24 C C3C HEM . . . J 3 -21.003 14.249 -4.729 1 50.38 ? C3C HEM 205 A 1 
HETATM 25 C C4C HEM . . . J 3 -19.597 14.034 -4.442 1 55.44 ? C4C HEM 205 A 1 
HETATM 26 C CMC HEM . . . J 3 -22.793 13.057 -6.202 1 46.17 ? CMC HEM 205 A 1 
HETATM 27 C CAC HEM . . . J 3 -21.809 15.425 -4.112 1 52.79 ? CAC HEM 205 A 1 
HETATM 28 C CBC HEM . . . J 3 -23.085 15.727 -4.385 1 44.83 ? CBC HEM 205 A 1 
HETATM 29 C C1D HEM . . . J 3 -17.518 14.515 -3.219 1 54.73 ? C1D HEM 205 A 1 
HETATM 30 C C2D HEM . . . J 3 -16.765 15.175 -2.169 1 64.1 ? C2D HEM 205 A 1 
HETATM 31 C C3D HEM . . . J 3 -15.549 14.588 -2.099 1 64.01 ? C3D HEM 205 A 1 
HETATM 32 C C4D HEM . . . J 3 -15.502 13.563 -3.122 1 57.43 ? C4D HEM 205 A 1 
HETATM 33 C CMD HEM . . . J 3 -17.355 16.318 -1.307 1 60.13 ? CMD HEM 205 A 1 
HETATM 34 C CAD HEM . . . J 3 -14.331 14.87 -1.176 1 55.14 ? CAD HEM 205 A 1 
HETATM 35 C CBD HEM . . . J 3 -14.035 16.34 -0.898 1 67.67 ? CBD HEM 205 A 1 
HETATM 36 C CGD HEM . . . J 3 -12.92 16.445 0.109 1 69.4 ? CGD HEM 205 A 1 
HETATM 37 O O1D HEM . . . J 3 -12.263 15.409 0.394 1 65.5 ? O1D HEM 205 A 1 
HETATM 38 O O2D HEM . . . J 3 -12.691 17.57 0.625 1 73.96 ? O2D HEM 205 A 1 
HETATM 39 N NA HEM . . . J 3 -15.364 11.48 -5.282 1 53.42 ? NA HEM 205 A 1 
HETATM 40 N NB HEM . . . J 3 -17.805 10.893 -6.688 1 56.95 ? NB HEM 205 A 1 
HETATM 41 N NC HEM . . . J 3 -19.175 12.918 -5.14 1 51.84 ? NC HEM 205 A 1 
HETATM 42 N ND HEM . . . J 3 -16.714 13.547 -3.78 1 56.25 ? ND HEM 205 A 1 
HETATM 43 FE FE HEM . . . J 3 -17.285 12.182 -5.186 1 56.32 ? FE HEM 205 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           43 
#