data_8E7Z
#
_model_server_result.job_id            ybi7JTqhCp5JUKT06r2v1Q 
_model_server_result.datetime_utc      '2024-11-25 06:26:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8e7z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":205}' 
#
_entry.id    8E7Z 
#
_exptl.entry_id    8E7Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    14 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.12 
_cell.angle_gamma         90 
_cell.entry_id            8E7Z 
_cell.length_a            58.553 
_cell.length_b            99.535 
_cell.length_c            95.484 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8E7Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,D,E,F,G,H,I,J,K,L,M,S,T 1 1,2 
C,N,O,P,Q,R,U 2 1,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -58.553 0 0 
3 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -16.777529 0 93.998451 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 216 n n 
C10 C9 OLC doub 217 n n 
C10 C11 OLC sing 218 n n 
C9 C8 OLC sing 219 n n 
C17 C16 OLC sing 220 z n 
C11 C12 OLC sing 221 n n 
C8 C7 OLC sing 222 n n 
C24 C22 OLC sing 223 n n 
C24 O25 OLC sing 224 n n 
C16 C15 OLC sing 225 n n 
C12 C13 OLC sing 226 n n 
C7 C6 OLC sing 227 n n 
C15 C14 OLC sing 228 n n 
C13 C14 OLC sing 229 n n 
C6 C5 OLC sing 230 n n 
C5 C4 OLC sing 231 n n 
C4 C3 OLC sing 232 n n 
C3 C2 OLC sing 233 n n 
C2 C1 OLC sing 234 n n 
C21 C22 OLC sing 235 n n 
C21 O20 OLC sing 236 n n 
C1 O19 OLC doub 237 n n 
C1 O20 OLC sing 238 n n 
C22 O23 OLC sing 239 n n 
C18 H18 OLC sing 240 n n 
C18 H18A OLC sing 241 n n 
C18 H18B OLC sing 242 n n 
C10 H10 OLC sing 243 n n 
C9 H9 OLC sing 244 n n 
C17 H17 OLC sing 245 n n 
C17 H17A OLC sing 246 n n 
C11 H11 OLC sing 247 n n 
C11 H11A OLC sing 248 n n 
C8 H8 OLC sing 249 n n 
C8 H8A OLC sing 250 n n 
C24 H24 OLC sing 251 n n 
C24 H24A OLC sing 252 n n 
C16 H16 OLC sing 253 n n 
C16 H16A OLC sing 254 n n 
C12 H12 OLC sing 255 n n 
C12 H12A OLC sing 256 n n 
C7 H7 OLC sing 257 n n 
C7 H7A OLC sing 258 n n 
C15 H15 OLC sing 259 n n 
C15 H15A OLC sing 260 n n 
C13 H13 OLC sing 261 n n 
C13 H13A OLC sing 262 n n 
C6 H6 OLC sing 263 n n 
C6 H6A OLC sing 264 n n 
C14 H14 OLC sing 265 n n 
C14 H14A OLC sing 266 n n 
C5 H5 OLC sing 267 n n 
C5 H5A OLC sing 268 n n 
C4 H4 OLC sing 269 n n 
C4 H4A OLC sing 270 n n 
C3 H3 OLC sing 271 n n 
C3 H3A OLC sing 272 n n 
C2 H2 OLC sing 273 n n 
C2 H2A OLC sing 274 n n 
C21 H21 OLC sing 275 n n 
C21 H21A OLC sing 276 n n 
C22 H22 OLC sing 277 n n 
O25 HO25 OLC sing 278 n n 
O23 HO23 OLC sing 279 n n 
#
_atom_sites.entry_id                     8E7Z 
_atom_sites.fract_transf_matrix[1][1]    0.017078 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003048 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010047 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010638 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 OLC A 1 201 1 OLC OLC . 
E 2 OLC A 1 202 3 OLC OLC . 
F 2 OLC A 1 203 4 OLC OLC . 
G 2 OLC A 1 204 5 OLC OLC . 
H 2 OLC A 1 205 6 OLC OLC . 
I 2 OLC A 1 206 14 OLC OLC . 
J 2 OLC B 1 201 7 OLC OLC . 
K 2 OLC B 1 202 8 OLC OLC . 
L 2 OLC B 1 203 10 OLC OLC . 
M 2 OLC B 1 204 15 OLC OLC . 
N 3 PEG C 1 201 201 PEG PEG . 
O 2 OLC C 1 202 2 OLC OLC . 
P 2 OLC C 1 203 11 OLC OLC . 
Q 2 OLC C 1 204 12 OLC OLC . 
R 2 OLC C 1 205 13 OLC OLC . 
S 4 HOH A 1 301 54 HOH HOH . 
S 4 HOH A 2 302 21 HOH HOH . 
S 4 HOH A 3 303 53 HOH HOH . 
S 4 HOH A 4 304 10 HOH HOH . 
S 4 HOH A 5 305 47 HOH HOH . 
S 4 HOH A 6 306 51 HOH HOH . 
S 4 HOH A 7 307 7 HOH HOH . 
S 4 HOH A 8 308 4 HOH HOH . 
S 4 HOH A 9 309 17 HOH HOH . 
S 4 HOH A 10 310 1 HOH HOH . 
S 4 HOH A 11 311 48 HOH HOH . 
S 4 HOH A 12 312 9 HOH HOH . 
S 4 HOH A 13 313 27 HOH HOH . 
S 4 HOH A 14 314 37 HOH HOH . 
S 4 HOH A 15 315 43 HOH HOH . 
S 4 HOH A 16 316 49 HOH HOH . 
T 4 HOH B 1 301 23 HOH HOH . 
T 4 HOH B 2 302 24 HOH HOH . 
T 4 HOH B 3 303 5 HOH HOH . 
T 4 HOH B 4 304 55 HOH HOH . 
T 4 HOH B 5 305 15 HOH HOH . 
T 4 HOH B 6 306 32 HOH HOH . 
T 4 HOH B 7 307 31 HOH HOH . 
T 4 HOH B 8 308 52 HOH HOH . 
T 4 HOH B 9 309 28 HOH HOH . 
T 4 HOH B 10 310 30 HOH HOH . 
T 4 HOH B 11 311 29 HOH HOH . 
T 4 HOH B 12 312 50 HOH HOH . 
U 4 HOH C 1 301 45 HOH HOH . 
U 4 HOH C 2 302 2 HOH HOH . 
U 4 HOH C 3 303 39 HOH HOH . 
U 4 HOH C 4 304 26 HOH HOH . 
U 4 HOH C 5 305 12 HOH HOH . 
U 4 HOH C 6 306 18 HOH HOH . 
U 4 HOH C 7 307 56 HOH HOH . 
U 4 HOH C 8 308 33 HOH HOH . 
U 4 HOH C 9 309 25 HOH HOH . 
U 4 HOH C 10 310 3 HOH HOH . 
U 4 HOH C 11 311 22 HOH HOH . 
U 4 HOH C 12 312 41 HOH HOH . 
U 4 HOH C 13 313 35 HOH HOH . 
U 4 HOH C 14 314 16 HOH HOH . 
U 4 HOH C 15 315 40 HOH HOH . 
U 4 HOH C 16 316 8 HOH HOH . 
U 4 HOH C 17 317 46 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C18 OLC . . . R 2 -20.266 -14.515 48.685 1 48.6 ? C18 OLC 205 C 1 
HETATM 2 C C10 OLC . . . R 2 -21.315 -6.069 50.713 1 42.17 ? C10 OLC 205 C 1 
HETATM 3 C C9 OLC . . . R 2 -21.857 -5.133 49.906 1 48.11 ? C9 OLC 205 C 1 
HETATM 4 C C17 OLC . . . R 2 -21.056 -13.233 48.536 1 37.99 ? C17 OLC 205 C 1 
HETATM 5 C C11 OLC . . . R 2 -20.896 -7.423 50.187 1 43.65 ? C11 OLC 205 C 1 
HETATM 6 C C8 OLC . . . R 2 -22.084 -5.376 48.428 1 40.7 ? C8 OLC 205 C 1 
HETATM 7 C C24 OLC . . . R 2 -26.009 5.433 43.833 1 58.43 ? C24 OLC 205 C 1 
HETATM 8 C C16 OLC . . . R 2 -20.136 -12.048 48.728 1 39.26 ? C16 OLC 205 C 1 
HETATM 9 C C12 OLC . . . R 2 -20.473 -8.293 51.352 1 37.14 ? C12 OLC 205 C 1 
HETATM 10 C C7 OLC . . . R 2 -22.944 -4.246 47.896 1 47.44 ? C7 OLC 205 C 1 
HETATM 11 C C15 OLC . . . R 2 -20.971 -10.801 48.917 1 50.62 ? C15 OLC 205 C 1 
HETATM 12 C C13 OLC . . . R 2 -19.963 -9.628 50.851 1 41.21 ? C13 OLC 205 C 1 
HETATM 13 C C6 OLC . . . R 2 -22.563 -3.91 46.469 1 47.66 ? C6 OLC 205 C 1 
HETATM 14 C C14 OLC . . . R 2 -21.119 -10.492 50.394 1 42.87 ? C14 OLC 205 C 1 
HETATM 15 C C5 OLC . . . R 2 -22.721 -2.42 46.24 1 43.77 ? C5 OLC 205 C 1 
HETATM 16 C C4 OLC . . . R 2 -22.432 -2.098 44.789 1 37 ? C4 OLC 205 C 1 
HETATM 17 C C3 OLC . . . R 2 -22.091 -0.629 44.657 1 37.03 ? C3 OLC 205 C 1 
HETATM 18 C C2 OLC . . . R 2 -23.068 0.048 43.72 1 46.95 ? C2 OLC 205 C 1 
HETATM 19 C C21 OLC . . . R 2 -24.624 3.4 44.058 1 49.22 ? C21 OLC 205 C 1 
HETATM 20 C C1 OLC . . . R 2 -23.308 1.459 44.209 1 52.1 ? C1 OLC 205 C 1 
HETATM 21 C C22 OLC . . . R 2 -25.262 4.356 43.076 1 55.6 ? C22 OLC 205 C 1 
HETATM 22 O O19 OLC . . . R 2 -23.009 1.754 45.35 1 56.28 ? O19 OLC 205 C 1 
HETATM 23 O O25 OLC . . . R 2 -25.693 6.701 43.3 1 57.89 ? O25 OLC 205 C 1 
HETATM 24 O O23 OLC . . . R 2 -24.26 4.943 42.279 1 56.64 ? O23 OLC 205 C 1 
HETATM 25 O O20 OLC . . . R 2 -23.876 2.428 43.364 1 48.46 ? O20 OLC 205 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    33 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           25 
#