data_8E9C # _model_server_result.job_id e8usU0XAa87NkgeVqx7JOA _model_server_result.datetime_utc '2024-11-28 16:28:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8e9c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 8E9C # _exptl.entry_id 8E9C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8E9C _cell.length_a 141.63 _cell.length_b 141.63 _cell.length_c 80.92 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8E9C _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall 'P 6c' _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 256 A LYS 246 1_555 C C4A PLP . A PLP 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.604 ? covale ? covale2 B NZ LYS 256 B LYS 246 1_555 F C4A PLP . B PLP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.639 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 316 n n S O2 SO4 doub 317 n n S O3 SO4 sing 318 n n S O4 SO4 sing 319 n n # _atom_sites.entry_id 8E9C _atom_sites.fract_transf_matrix[1][1] 0.007061 _atom_sites.fract_transf_matrix[1][2] 0.004076 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008153 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012358 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PLP A 1 401 500 PLP PLP . D 3 SO4 A 1 402 600 SO4 SO4 . E 3 SO4 B 1 401 600 SO4 SO4 . F 2 PLP B 1 402 500 PLP PLP . G 4 HOH A 1 501 164 HOH HOH . G 4 HOH A 2 502 187 HOH HOH . G 4 HOH A 3 503 15 HOH HOH . G 4 HOH A 4 504 211 HOH HOH . G 4 HOH A 5 505 162 HOH HOH . G 4 HOH A 6 506 179 HOH HOH . G 4 HOH A 7 507 11 HOH HOH . G 4 HOH A 8 508 115 HOH HOH . G 4 HOH A 9 509 51 HOH HOH . G 4 HOH A 10 510 210 HOH HOH . G 4 HOH A 11 511 30 HOH HOH . G 4 HOH A 12 512 114 HOH HOH . G 4 HOH A 13 513 34 HOH HOH . G 4 HOH A 14 514 76 HOH HOH . G 4 HOH A 15 515 194 HOH HOH . G 4 HOH A 16 516 135 HOH HOH . G 4 HOH A 17 517 198 HOH HOH . G 4 HOH A 18 518 214 HOH HOH . G 4 HOH A 19 519 21 HOH HOH . G 4 HOH A 20 520 208 HOH HOH . G 4 HOH A 21 521 64 HOH HOH . G 4 HOH A 22 522 213 HOH HOH . G 4 HOH A 23 523 9 HOH HOH . G 4 HOH A 24 524 41 HOH HOH . G 4 HOH A 25 525 180 HOH HOH . G 4 HOH A 26 526 151 HOH HOH . G 4 HOH A 27 527 77 HOH HOH . G 4 HOH A 28 528 166 HOH HOH . G 4 HOH A 29 529 57 HOH HOH . G 4 HOH A 30 530 92 HOH HOH . G 4 HOH A 31 531 63 HOH HOH . G 4 HOH A 32 532 71 HOH HOH . G 4 HOH A 33 533 6 HOH HOH . G 4 HOH A 34 534 67 HOH HOH . G 4 HOH A 35 535 35 HOH HOH . G 4 HOH A 36 536 81 HOH HOH . G 4 HOH A 37 537 16 HOH HOH . G 4 HOH A 38 538 50 HOH HOH . G 4 HOH A 39 539 112 HOH HOH . G 4 HOH A 40 540 96 HOH HOH . G 4 HOH A 41 541 94 HOH HOH . G 4 HOH A 42 542 8 HOH HOH . G 4 HOH A 43 543 145 HOH HOH . G 4 HOH A 44 544 142 HOH HOH . G 4 HOH A 45 545 78 HOH HOH . G 4 HOH A 46 546 87 HOH HOH . G 4 HOH A 47 547 22 HOH HOH . G 4 HOH A 48 548 207 HOH HOH . G 4 HOH A 49 549 65 HOH HOH . G 4 HOH A 50 550 32 HOH HOH . G 4 HOH A 51 551 48 HOH HOH . G 4 HOH A 52 552 47 HOH HOH . G 4 HOH A 53 553 75 HOH HOH . G 4 HOH A 54 554 25 HOH HOH . G 4 HOH A 55 555 54 HOH HOH . G 4 HOH A 56 556 203 HOH HOH . G 4 HOH A 57 557 18 HOH HOH . G 4 HOH A 58 558 68 HOH HOH . G 4 HOH A 59 559 73 HOH HOH . G 4 HOH A 60 560 20 HOH HOH . G 4 HOH A 61 561 4 HOH HOH . G 4 HOH A 62 562 28 HOH HOH . G 4 HOH A 63 563 103 HOH HOH . G 4 HOH A 64 564 132 HOH HOH . G 4 HOH A 65 565 212 HOH HOH . G 4 HOH A 66 566 157 HOH HOH . G 4 HOH A 67 567 100 HOH HOH . G 4 HOH A 68 568 123 HOH HOH . G 4 HOH A 69 569 88 HOH HOH . G 4 HOH A 70 570 170 HOH HOH . G 4 HOH A 71 571 99 HOH HOH . G 4 HOH A 72 572 98 HOH HOH . G 4 HOH A 73 573 161 HOH HOH . G 4 HOH A 74 574 66 HOH HOH . G 4 HOH A 75 575 97 HOH HOH . G 4 HOH A 76 576 37 HOH HOH . G 4 HOH A 77 577 58 HOH HOH . G 4 HOH A 78 578 90 HOH HOH . G 4 HOH A 79 579 60 HOH HOH . G 4 HOH A 80 580 72 HOH HOH . G 4 HOH A 81 581 33 HOH HOH . G 4 HOH A 82 582 38 HOH HOH . G 4 HOH A 83 583 109 HOH HOH . G 4 HOH A 84 584 117 HOH HOH . G 4 HOH A 85 585 149 HOH HOH . G 4 HOH A 86 586 59 HOH HOH . G 4 HOH A 87 587 5 HOH HOH . G 4 HOH A 88 588 150 HOH HOH . G 4 HOH A 89 589 174 HOH HOH . G 4 HOH A 90 590 127 HOH HOH . G 4 HOH A 91 591 188 HOH HOH . G 4 HOH A 92 592 89 HOH HOH . G 4 HOH A 93 593 128 HOH HOH . G 4 HOH A 94 594 107 HOH HOH . G 4 HOH A 95 595 52 HOH HOH . G 4 HOH A 96 596 36 HOH HOH . G 4 HOH A 97 597 189 HOH HOH . G 4 HOH A 98 598 82 HOH HOH . G 4 HOH A 99 599 137 HOH HOH . H 4 HOH B 1 501 110 HOH HOH . H 4 HOH B 2 502 10 HOH HOH . H 4 HOH B 3 503 173 HOH HOH . H 4 HOH B 4 504 176 HOH HOH . H 4 HOH B 5 505 209 HOH HOH . H 4 HOH B 6 506 40 HOH HOH . H 4 HOH B 7 507 169 HOH HOH . H 4 HOH B 8 508 206 HOH HOH . H 4 HOH B 9 509 193 HOH HOH . H 4 HOH B 10 510 29 HOH HOH . H 4 HOH B 11 511 124 HOH HOH . H 4 HOH B 12 512 199 HOH HOH . H 4 HOH B 13 513 192 HOH HOH . H 4 HOH B 14 514 26 HOH HOH . H 4 HOH B 15 515 168 HOH HOH . H 4 HOH B 16 516 148 HOH HOH . H 4 HOH B 17 517 126 HOH HOH . H 4 HOH B 18 518 83 HOH HOH . H 4 HOH B 19 519 191 HOH HOH . H 4 HOH B 20 520 185 HOH HOH . H 4 HOH B 21 521 195 HOH HOH . H 4 HOH B 22 522 3 HOH HOH . H 4 HOH B 23 523 177 HOH HOH . H 4 HOH B 24 524 105 HOH HOH . H 4 HOH B 25 525 70 HOH HOH . H 4 HOH B 26 526 74 HOH HOH . H 4 HOH B 27 527 93 HOH HOH . H 4 HOH B 28 528 45 HOH HOH . H 4 HOH B 29 529 167 HOH HOH . H 4 HOH B 30 530 55 HOH HOH . H 4 HOH B 31 531 111 HOH HOH . H 4 HOH B 32 532 44 HOH HOH . H 4 HOH B 33 533 215 HOH HOH . H 4 HOH B 34 534 121 HOH HOH . H 4 HOH B 35 535 106 HOH HOH . H 4 HOH B 36 536 23 HOH HOH . H 4 HOH B 37 537 181 HOH HOH . H 4 HOH B 38 538 133 HOH HOH . H 4 HOH B 39 539 53 HOH HOH . H 4 HOH B 40 540 43 HOH HOH . H 4 HOH B 41 541 171 HOH HOH . H 4 HOH B 42 542 147 HOH HOH . H 4 HOH B 43 543 186 HOH HOH . H 4 HOH B 44 544 163 HOH HOH . H 4 HOH B 45 545 80 HOH HOH . H 4 HOH B 46 546 2 HOH HOH . H 4 HOH B 47 547 175 HOH HOH . H 4 HOH B 48 548 134 HOH HOH . H 4 HOH B 49 549 125 HOH HOH . H 4 HOH B 50 550 17 HOH HOH . H 4 HOH B 51 551 197 HOH HOH . H 4 HOH B 52 552 56 HOH HOH . H 4 HOH B 53 553 19 HOH HOH . H 4 HOH B 54 554 200 HOH HOH . H 4 HOH B 55 555 27 HOH HOH . H 4 HOH B 56 556 205 HOH HOH . H 4 HOH B 57 557 101 HOH HOH . H 4 HOH B 58 558 204 HOH HOH . H 4 HOH B 59 559 49 HOH HOH . H 4 HOH B 60 560 146 HOH HOH . H 4 HOH B 61 561 39 HOH HOH . H 4 HOH B 62 562 172 HOH HOH . H 4 HOH B 63 563 61 HOH HOH . H 4 HOH B 64 564 201 HOH HOH . H 4 HOH B 65 565 13 HOH HOH . H 4 HOH B 66 566 118 HOH HOH . H 4 HOH B 67 567 183 HOH HOH . H 4 HOH B 68 568 196 HOH HOH . H 4 HOH B 69 569 184 HOH HOH . H 4 HOH B 70 570 102 HOH HOH . H 4 HOH B 71 571 202 HOH HOH . H 4 HOH B 72 572 190 HOH HOH . H 4 HOH B 73 573 91 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 60.812 3.997 1.105 1 104.68 ? S SO4 402 A 1 HETATM 2 O O1 SO4 . . . D 3 59.37 3.92 1.328 1 105.5 ? O1 SO4 402 A 1 HETATM 3 O O2 SO4 . . . D 3 61.101 3.724 -0.3 1 102.92 ? O2 SO4 402 A 1 HETATM 4 O O3 SO4 . . . D 3 61.286 5.334 1.453 1 104.3 ? O3 SO4 402 A 1 HETATM 5 O O4 SO4 . . . D 3 61.489 3.007 1.938 1 104.7 ? O4 SO4 402 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #