data_8E9C
#
_model_server_result.job_id            v0PnKHrGEUAuGGiKJkVhvA 
_model_server_result.datetime_utc      '2024-10-25 20:25:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8e9c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    8E9C 
#
_exptl.entry_id    8E9C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8E9C 
_cell.length_a            141.63 
_cell.length_b            141.63 
_cell.length_c            80.92 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8E9C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        173 
_symmetry.space_group_name_Hall    'P 6c' 
_symmetry.space_group_name_H-M     'P 63' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 256 A LYS 246 1_555 C C4A PLP . A PLP 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.604 ? 
covale ? covale2 B NZ LYS 256 B LYS 246 1_555 F C4A PLP . B PLP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.639 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 316 n n 
S O2 SO4 doub 317 n n 
S O3 SO4 sing 318 n n 
S O4 SO4 sing 319 n n 
#
_atom_sites.entry_id                     8E9C 
_atom_sites.fract_transf_matrix[1][1]    0.007061 
_atom_sites.fract_transf_matrix[1][2]    0.004076 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008153 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012358 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PLP A 1 401 500 PLP PLP . 
D 3 SO4 A 1 402 600 SO4 SO4 . 
E 3 SO4 B 1 401 600 SO4 SO4 . 
F 2 PLP B 1 402 500 PLP PLP . 
G 4 HOH A 1 501 164 HOH HOH . 
G 4 HOH A 2 502 187 HOH HOH . 
G 4 HOH A 3 503 15 HOH HOH . 
G 4 HOH A 4 504 211 HOH HOH . 
G 4 HOH A 5 505 162 HOH HOH . 
G 4 HOH A 6 506 179 HOH HOH . 
G 4 HOH A 7 507 11 HOH HOH . 
G 4 HOH A 8 508 115 HOH HOH . 
G 4 HOH A 9 509 51 HOH HOH . 
G 4 HOH A 10 510 210 HOH HOH . 
G 4 HOH A 11 511 30 HOH HOH . 
G 4 HOH A 12 512 114 HOH HOH . 
G 4 HOH A 13 513 34 HOH HOH . 
G 4 HOH A 14 514 76 HOH HOH . 
G 4 HOH A 15 515 194 HOH HOH . 
G 4 HOH A 16 516 135 HOH HOH . 
G 4 HOH A 17 517 198 HOH HOH . 
G 4 HOH A 18 518 214 HOH HOH . 
G 4 HOH A 19 519 21 HOH HOH . 
G 4 HOH A 20 520 208 HOH HOH . 
G 4 HOH A 21 521 64 HOH HOH . 
G 4 HOH A 22 522 213 HOH HOH . 
G 4 HOH A 23 523 9 HOH HOH . 
G 4 HOH A 24 524 41 HOH HOH . 
G 4 HOH A 25 525 180 HOH HOH . 
G 4 HOH A 26 526 151 HOH HOH . 
G 4 HOH A 27 527 77 HOH HOH . 
G 4 HOH A 28 528 166 HOH HOH . 
G 4 HOH A 29 529 57 HOH HOH . 
G 4 HOH A 30 530 92 HOH HOH . 
G 4 HOH A 31 531 63 HOH HOH . 
G 4 HOH A 32 532 71 HOH HOH . 
G 4 HOH A 33 533 6 HOH HOH . 
G 4 HOH A 34 534 67 HOH HOH . 
G 4 HOH A 35 535 35 HOH HOH . 
G 4 HOH A 36 536 81 HOH HOH . 
G 4 HOH A 37 537 16 HOH HOH . 
G 4 HOH A 38 538 50 HOH HOH . 
G 4 HOH A 39 539 112 HOH HOH . 
G 4 HOH A 40 540 96 HOH HOH . 
G 4 HOH A 41 541 94 HOH HOH . 
G 4 HOH A 42 542 8 HOH HOH . 
G 4 HOH A 43 543 145 HOH HOH . 
G 4 HOH A 44 544 142 HOH HOH . 
G 4 HOH A 45 545 78 HOH HOH . 
G 4 HOH A 46 546 87 HOH HOH . 
G 4 HOH A 47 547 22 HOH HOH . 
G 4 HOH A 48 548 207 HOH HOH . 
G 4 HOH A 49 549 65 HOH HOH . 
G 4 HOH A 50 550 32 HOH HOH . 
G 4 HOH A 51 551 48 HOH HOH . 
G 4 HOH A 52 552 47 HOH HOH . 
G 4 HOH A 53 553 75 HOH HOH . 
G 4 HOH A 54 554 25 HOH HOH . 
G 4 HOH A 55 555 54 HOH HOH . 
G 4 HOH A 56 556 203 HOH HOH . 
G 4 HOH A 57 557 18 HOH HOH . 
G 4 HOH A 58 558 68 HOH HOH . 
G 4 HOH A 59 559 73 HOH HOH . 
G 4 HOH A 60 560 20 HOH HOH . 
G 4 HOH A 61 561 4 HOH HOH . 
G 4 HOH A 62 562 28 HOH HOH . 
G 4 HOH A 63 563 103 HOH HOH . 
G 4 HOH A 64 564 132 HOH HOH . 
G 4 HOH A 65 565 212 HOH HOH . 
G 4 HOH A 66 566 157 HOH HOH . 
G 4 HOH A 67 567 100 HOH HOH . 
G 4 HOH A 68 568 123 HOH HOH . 
G 4 HOH A 69 569 88 HOH HOH . 
G 4 HOH A 70 570 170 HOH HOH . 
G 4 HOH A 71 571 99 HOH HOH . 
G 4 HOH A 72 572 98 HOH HOH . 
G 4 HOH A 73 573 161 HOH HOH . 
G 4 HOH A 74 574 66 HOH HOH . 
G 4 HOH A 75 575 97 HOH HOH . 
G 4 HOH A 76 576 37 HOH HOH . 
G 4 HOH A 77 577 58 HOH HOH . 
G 4 HOH A 78 578 90 HOH HOH . 
G 4 HOH A 79 579 60 HOH HOH . 
G 4 HOH A 80 580 72 HOH HOH . 
G 4 HOH A 81 581 33 HOH HOH . 
G 4 HOH A 82 582 38 HOH HOH . 
G 4 HOH A 83 583 109 HOH HOH . 
G 4 HOH A 84 584 117 HOH HOH . 
G 4 HOH A 85 585 149 HOH HOH . 
G 4 HOH A 86 586 59 HOH HOH . 
G 4 HOH A 87 587 5 HOH HOH . 
G 4 HOH A 88 588 150 HOH HOH . 
G 4 HOH A 89 589 174 HOH HOH . 
G 4 HOH A 90 590 127 HOH HOH . 
G 4 HOH A 91 591 188 HOH HOH . 
G 4 HOH A 92 592 89 HOH HOH . 
G 4 HOH A 93 593 128 HOH HOH . 
G 4 HOH A 94 594 107 HOH HOH . 
G 4 HOH A 95 595 52 HOH HOH . 
G 4 HOH A 96 596 36 HOH HOH . 
G 4 HOH A 97 597 189 HOH HOH . 
G 4 HOH A 98 598 82 HOH HOH . 
G 4 HOH A 99 599 137 HOH HOH . 
H 4 HOH B 1 501 110 HOH HOH . 
H 4 HOH B 2 502 10 HOH HOH . 
H 4 HOH B 3 503 173 HOH HOH . 
H 4 HOH B 4 504 176 HOH HOH . 
H 4 HOH B 5 505 209 HOH HOH . 
H 4 HOH B 6 506 40 HOH HOH . 
H 4 HOH B 7 507 169 HOH HOH . 
H 4 HOH B 8 508 206 HOH HOH . 
H 4 HOH B 9 509 193 HOH HOH . 
H 4 HOH B 10 510 29 HOH HOH . 
H 4 HOH B 11 511 124 HOH HOH . 
H 4 HOH B 12 512 199 HOH HOH . 
H 4 HOH B 13 513 192 HOH HOH . 
H 4 HOH B 14 514 26 HOH HOH . 
H 4 HOH B 15 515 168 HOH HOH . 
H 4 HOH B 16 516 148 HOH HOH . 
H 4 HOH B 17 517 126 HOH HOH . 
H 4 HOH B 18 518 83 HOH HOH . 
H 4 HOH B 19 519 191 HOH HOH . 
H 4 HOH B 20 520 185 HOH HOH . 
H 4 HOH B 21 521 195 HOH HOH . 
H 4 HOH B 22 522 3 HOH HOH . 
H 4 HOH B 23 523 177 HOH HOH . 
H 4 HOH B 24 524 105 HOH HOH . 
H 4 HOH B 25 525 70 HOH HOH . 
H 4 HOH B 26 526 74 HOH HOH . 
H 4 HOH B 27 527 93 HOH HOH . 
H 4 HOH B 28 528 45 HOH HOH . 
H 4 HOH B 29 529 167 HOH HOH . 
H 4 HOH B 30 530 55 HOH HOH . 
H 4 HOH B 31 531 111 HOH HOH . 
H 4 HOH B 32 532 44 HOH HOH . 
H 4 HOH B 33 533 215 HOH HOH . 
H 4 HOH B 34 534 121 HOH HOH . 
H 4 HOH B 35 535 106 HOH HOH . 
H 4 HOH B 36 536 23 HOH HOH . 
H 4 HOH B 37 537 181 HOH HOH . 
H 4 HOH B 38 538 133 HOH HOH . 
H 4 HOH B 39 539 53 HOH HOH . 
H 4 HOH B 40 540 43 HOH HOH . 
H 4 HOH B 41 541 171 HOH HOH . 
H 4 HOH B 42 542 147 HOH HOH . 
H 4 HOH B 43 543 186 HOH HOH . 
H 4 HOH B 44 544 163 HOH HOH . 
H 4 HOH B 45 545 80 HOH HOH . 
H 4 HOH B 46 546 2 HOH HOH . 
H 4 HOH B 47 547 175 HOH HOH . 
H 4 HOH B 48 548 134 HOH HOH . 
H 4 HOH B 49 549 125 HOH HOH . 
H 4 HOH B 50 550 17 HOH HOH . 
H 4 HOH B 51 551 197 HOH HOH . 
H 4 HOH B 52 552 56 HOH HOH . 
H 4 HOH B 53 553 19 HOH HOH . 
H 4 HOH B 54 554 200 HOH HOH . 
H 4 HOH B 55 555 27 HOH HOH . 
H 4 HOH B 56 556 205 HOH HOH . 
H 4 HOH B 57 557 101 HOH HOH . 
H 4 HOH B 58 558 204 HOH HOH . 
H 4 HOH B 59 559 49 HOH HOH . 
H 4 HOH B 60 560 146 HOH HOH . 
H 4 HOH B 61 561 39 HOH HOH . 
H 4 HOH B 62 562 172 HOH HOH . 
H 4 HOH B 63 563 61 HOH HOH . 
H 4 HOH B 64 564 201 HOH HOH . 
H 4 HOH B 65 565 13 HOH HOH . 
H 4 HOH B 66 566 118 HOH HOH . 
H 4 HOH B 67 567 183 HOH HOH . 
H 4 HOH B 68 568 196 HOH HOH . 
H 4 HOH B 69 569 184 HOH HOH . 
H 4 HOH B 70 570 102 HOH HOH . 
H 4 HOH B 71 571 202 HOH HOH . 
H 4 HOH B 72 572 190 HOH HOH . 
H 4 HOH B 73 573 91 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . D 3 60.812 3.997 1.105 1 104.68 ? S SO4 402 A 1 
HETATM 2 O O1 SO4 . . . D 3 59.37 3.92 1.328 1 105.5 ? O1 SO4 402 A 1 
HETATM 3 O O2 SO4 . . . D 3 61.101 3.724 -0.3 1 102.92 ? O2 SO4 402 A 1 
HETATM 4 O O3 SO4 . . . D 3 61.286 5.334 1.453 1 104.3 ? O3 SO4 402 A 1 
HETATM 5 O O4 SO4 . . . D 3 61.489 3.007 1.938 1 104.7 ? O4 SO4 402 A 1 
#
_model_server_stats.io_time_ms              128 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           5 
#