data_8E9P # _model_server_result.job_id xKs1KPhKzvhnRtyavXuh3Q _model_server_result.datetime_utc '2024-11-24 23:25:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8e9p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 8E9P # _exptl.entry_id 8E9P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8E9P _cell.length_a 143.83 _cell.length_b 143.83 _cell.length_c 81.57 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8E9P _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall 'P 6c' _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 256 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 246 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C4A _struct_conn.ptnr2_label_comp_id PLP _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PLP _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.593 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 316 n n S O2 SO4 doub 317 n n S O3 SO4 sing 318 n n S O4 SO4 sing 319 n n # _atom_sites.entry_id 8E9P _atom_sites.fract_transf_matrix[1][1] 0.006953 _atom_sites.fract_transf_matrix[1][2] 0.004014 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008028 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012259 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PLP A 1 401 500 PLP PLP . D 3 SO4 A 1 402 600 SO4 SO4 . E 3 SO4 B 1 401 600 SO4 SO4 . F 2 PLP B 1 402 500 PLP PLP . G 4 HOH A 1 501 152 HOH HOH . G 4 HOH A 2 502 178 HOH HOH . G 4 HOH A 3 503 133 HOH HOH . G 4 HOH A 4 504 39 HOH HOH . G 4 HOH A 5 505 118 HOH HOH . G 4 HOH A 6 506 9 HOH HOH . G 4 HOH A 7 507 20 HOH HOH . G 4 HOH A 8 508 142 HOH HOH . G 4 HOH A 9 509 187 HOH HOH . G 4 HOH A 10 510 11 HOH HOH . G 4 HOH A 11 511 155 HOH HOH . G 4 HOH A 12 512 10 HOH HOH . G 4 HOH A 13 513 100 HOH HOH . G 4 HOH A 14 514 156 HOH HOH . G 4 HOH A 15 515 13 HOH HOH . G 4 HOH A 16 516 17 HOH HOH . G 4 HOH A 17 517 49 HOH HOH . G 4 HOH A 18 518 95 HOH HOH . G 4 HOH A 19 519 129 HOH HOH . G 4 HOH A 20 520 103 HOH HOH . G 4 HOH A 21 521 112 HOH HOH . G 4 HOH A 22 522 81 HOH HOH . G 4 HOH A 23 523 69 HOH HOH . G 4 HOH A 24 524 92 HOH HOH . G 4 HOH A 25 525 96 HOH HOH . G 4 HOH A 26 526 34 HOH HOH . G 4 HOH A 27 527 59 HOH HOH . G 4 HOH A 28 528 117 HOH HOH . G 4 HOH A 29 529 21 HOH HOH . G 4 HOH A 30 530 61 HOH HOH . G 4 HOH A 31 531 62 HOH HOH . G 4 HOH A 32 532 88 HOH HOH . G 4 HOH A 33 533 107 HOH HOH . G 4 HOH A 34 534 52 HOH HOH . G 4 HOH A 35 535 19 HOH HOH . G 4 HOH A 36 536 74 HOH HOH . G 4 HOH A 37 537 138 HOH HOH . G 4 HOH A 38 538 46 HOH HOH . G 4 HOH A 39 539 176 HOH HOH . G 4 HOH A 40 540 97 HOH HOH . G 4 HOH A 41 541 16 HOH HOH . G 4 HOH A 42 542 151 HOH HOH . G 4 HOH A 43 543 123 HOH HOH . G 4 HOH A 44 544 57 HOH HOH . G 4 HOH A 45 545 170 HOH HOH . G 4 HOH A 46 546 98 HOH HOH . G 4 HOH A 47 547 41 HOH HOH . G 4 HOH A 48 548 89 HOH HOH . G 4 HOH A 49 549 56 HOH HOH . G 4 HOH A 50 550 67 HOH HOH . G 4 HOH A 51 551 128 HOH HOH . G 4 HOH A 52 552 7 HOH HOH . G 4 HOH A 53 553 22 HOH HOH . G 4 HOH A 54 554 188 HOH HOH . G 4 HOH A 55 555 181 HOH HOH . G 4 HOH A 56 556 50 HOH HOH . G 4 HOH A 57 557 71 HOH HOH . G 4 HOH A 58 558 6 HOH HOH . G 4 HOH A 59 559 12 HOH HOH . G 4 HOH A 60 560 148 HOH HOH . G 4 HOH A 61 561 29 HOH HOH . G 4 HOH A 62 562 136 HOH HOH . G 4 HOH A 63 563 76 HOH HOH . G 4 HOH A 64 564 83 HOH HOH . G 4 HOH A 65 565 65 HOH HOH . G 4 HOH A 66 566 8 HOH HOH . G 4 HOH A 67 567 167 HOH HOH . G 4 HOH A 68 568 159 HOH HOH . G 4 HOH A 69 569 54 HOH HOH . G 4 HOH A 70 570 23 HOH HOH . G 4 HOH A 71 571 134 HOH HOH . G 4 HOH A 72 572 42 HOH HOH . G 4 HOH A 73 573 91 HOH HOH . G 4 HOH A 74 574 94 HOH HOH . G 4 HOH A 75 575 93 HOH HOH . G 4 HOH A 76 576 63 HOH HOH . G 4 HOH A 77 577 104 HOH HOH . G 4 HOH A 78 578 48 HOH HOH . G 4 HOH A 79 579 139 HOH HOH . G 4 HOH A 80 580 144 HOH HOH . G 4 HOH A 81 581 1 HOH HOH . G 4 HOH A 82 582 102 HOH HOH . G 4 HOH A 83 583 165 HOH HOH . G 4 HOH A 84 584 121 HOH HOH . G 4 HOH A 85 585 174 HOH HOH . G 4 HOH A 86 586 145 HOH HOH . G 4 HOH A 87 587 90 HOH HOH . G 4 HOH A 88 588 162 HOH HOH . G 4 HOH A 89 589 143 HOH HOH . G 4 HOH A 90 590 2 HOH HOH . G 4 HOH A 91 591 14 HOH HOH . G 4 HOH A 92 592 32 HOH HOH . G 4 HOH A 93 593 127 HOH HOH . G 4 HOH A 94 594 106 HOH HOH . G 4 HOH A 95 595 60 HOH HOH . G 4 HOH A 96 596 87 HOH HOH . G 4 HOH A 97 597 126 HOH HOH . G 4 HOH A 98 598 172 HOH HOH . G 4 HOH A 99 599 131 HOH HOH . H 4 HOH B 1 501 161 HOH HOH . H 4 HOH B 2 502 157 HOH HOH . H 4 HOH B 3 503 149 HOH HOH . H 4 HOH B 4 504 82 HOH HOH . H 4 HOH B 5 505 125 HOH HOH . H 4 HOH B 6 506 116 HOH HOH . H 4 HOH B 7 507 182 HOH HOH . H 4 HOH B 8 508 47 HOH HOH . H 4 HOH B 9 509 84 HOH HOH . H 4 HOH B 10 510 122 HOH HOH . H 4 HOH B 11 511 45 HOH HOH . H 4 HOH B 12 512 141 HOH HOH . H 4 HOH B 13 513 130 HOH HOH . H 4 HOH B 14 514 38 HOH HOH . H 4 HOH B 15 515 43 HOH HOH . H 4 HOH B 16 516 177 HOH HOH . H 4 HOH B 17 517 80 HOH HOH . H 4 HOH B 18 518 15 HOH HOH . H 4 HOH B 19 519 51 HOH HOH . H 4 HOH B 20 520 3 HOH HOH . H 4 HOH B 21 521 24 HOH HOH . H 4 HOH B 22 522 4 HOH HOH . H 4 HOH B 23 523 108 HOH HOH . H 4 HOH B 24 524 168 HOH HOH . H 4 HOH B 25 525 120 HOH HOH . H 4 HOH B 26 526 85 HOH HOH . H 4 HOH B 27 527 66 HOH HOH . H 4 HOH B 28 528 72 HOH HOH . H 4 HOH B 29 529 79 HOH HOH . H 4 HOH B 30 530 64 HOH HOH . H 4 HOH B 31 531 137 HOH HOH . H 4 HOH B 32 532 44 HOH HOH . H 4 HOH B 33 533 70 HOH HOH . H 4 HOH B 34 534 101 HOH HOH . H 4 HOH B 35 535 166 HOH HOH . H 4 HOH B 36 536 68 HOH HOH . H 4 HOH B 37 537 173 HOH HOH . H 4 HOH B 38 538 53 HOH HOH . H 4 HOH B 39 539 169 HOH HOH . H 4 HOH B 40 540 154 HOH HOH . H 4 HOH B 41 541 132 HOH HOH . H 4 HOH B 42 542 5 HOH HOH . H 4 HOH B 43 543 179 HOH HOH . H 4 HOH B 44 544 25 HOH HOH . H 4 HOH B 45 545 36 HOH HOH . H 4 HOH B 46 546 33 HOH HOH . H 4 HOH B 47 547 114 HOH HOH . H 4 HOH B 48 548 180 HOH HOH . H 4 HOH B 49 549 158 HOH HOH . H 4 HOH B 50 550 86 HOH HOH . H 4 HOH B 51 551 110 HOH HOH . H 4 HOH B 52 552 77 HOH HOH . H 4 HOH B 53 553 119 HOH HOH . H 4 HOH B 54 554 18 HOH HOH . H 4 HOH B 55 555 55 HOH HOH . H 4 HOH B 56 556 109 HOH HOH . H 4 HOH B 57 557 75 HOH HOH . H 4 HOH B 58 558 105 HOH HOH . H 4 HOH B 59 559 153 HOH HOH . H 4 HOH B 60 560 185 HOH HOH . H 4 HOH B 61 561 160 HOH HOH . H 4 HOH B 62 562 140 HOH HOH . H 4 HOH B 63 563 150 HOH HOH . H 4 HOH B 64 564 58 HOH HOH . H 4 HOH B 65 565 73 HOH HOH . H 4 HOH B 66 566 115 HOH HOH . H 4 HOH B 67 567 124 HOH HOH . H 4 HOH B 68 568 99 HOH HOH . H 4 HOH B 69 569 175 HOH HOH . H 4 HOH B 70 570 27 HOH HOH . H 4 HOH B 71 571 26 HOH HOH . H 4 HOH B 72 572 163 HOH HOH . H 4 HOH B 73 573 186 HOH HOH . H 4 HOH B 74 574 35 HOH HOH . H 4 HOH B 75 575 171 HOH HOH . H 4 HOH B 76 576 184 HOH HOH . H 4 HOH B 77 577 78 HOH HOH . H 4 HOH B 78 578 113 HOH HOH . H 4 HOH B 79 579 183 HOH HOH . H 4 HOH B 80 580 135 HOH HOH . H 4 HOH B 81 581 164 HOH HOH . H 4 HOH B 82 582 147 HOH HOH . H 4 HOH B 83 583 40 HOH HOH . H 4 HOH B 84 584 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 36.503 72.944 -2.482 0.56 54.36 ? S SO4 402 A 1 HETATM 2 O O1 SO4 . . . D 3 35.364 72.768 -3.38 0.56 51.82 ? O1 SO4 402 A 1 HETATM 3 O O2 SO4 . . . D 3 37.661 72.229 -3.01 0.56 55.4 ? O2 SO4 402 A 1 HETATM 4 O O3 SO4 . . . D 3 36.171 72.416 -1.162 0.56 54.04 ? O3 SO4 402 A 1 HETATM 5 O O4 SO4 . . . D 3 36.821 74.366 -2.376 0.56 55.47 ? O4 SO4 402 A 1 # _model_server_stats.io_time_ms 117 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #