data_8E9Y
#
_model_server_result.job_id            rRDggTJSikrGRCL4BWWslQ 
_model_server_result.datetime_utc      '2024-10-20 20:21:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8e9y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":801}' 
#
_entry.id    8E9Y 
#
_exptl.entry_id    8E9Y 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              342.823 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            8-chloro-11-(4-methyl-4-oxo-4lambda~5~-piperazin-1-yl)-5H-dibenzo[b,e][1,4]diazepine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8E9Y 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8E9Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 96 A CYS 141 1_555 A SG CYS 176 A CYS 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 A SG CYS 292 A CYS 517 1_555 A SG CYS 295 A CYS 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 E SG CYS 159 E CYS 147 1_555 E SG CYS 229 E CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
#
_chem_comp.formula           'C18 H19 Cl N4 O' 
_chem_comp.formula_weight    342.823 
_chem_comp.id                WE9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              8-chloro-11-(4-methyl-4-oxo-4lambda~5~-piperazin-1-yl)-5H-dibenzo[b,e][1,4]diazepine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL01 C02 WE9 sing 374 n n 
C02 C03 WE9 doub 375 n y 
C02 C05 WE9 sing 376 n y 
C03 C04 WE9 sing 377 n y 
C05 C06 WE9 doub 378 n y 
C04 C07 WE9 doub 379 n y 
C06 C07 WE9 sing 380 n y 
C06 N24 WE9 sing 381 n n 
C07 N08 WE9 sing 382 n n 
N24 C15 WE9 doub 383 n n 
C20 N19 WE9 sing 384 n n 
C17 C18 WE9 sing 385 n n 
C17 N16 WE9 sing 386 n n 
N08 C09 WE9 sing 387 n n 
C18 N19 WE9 sing 388 n n 
N19 O21 WE9 sing 389 n n 
N19 C22 WE9 sing 390 n n 
C15 N16 WE9 sing 391 n n 
C15 C14 WE9 sing 392 n n 
N16 C23 WE9 sing 393 n n 
C09 C14 WE9 doub 394 n y 
C09 C10 WE9 sing 395 n y 
C22 C23 WE9 sing 396 n n 
C14 C13 WE9 sing 397 n y 
C10 C11 WE9 doub 398 n y 
C13 C12 WE9 doub 399 n y 
C11 C12 WE9 sing 400 n y 
C10 H1 WE9 sing 401 n n 
C11 H2 WE9 sing 402 n n 
C12 H3 WE9 sing 403 n n 
C13 H4 WE9 sing 404 n n 
C18 H5 WE9 sing 405 n n 
C18 H6 WE9 sing 406 n n 
C20 H7 WE9 sing 407 n n 
C20 H8 WE9 sing 408 n n 
C20 H9 WE9 sing 409 n n 
C22 H10 WE9 sing 410 n n 
C22 H11 WE9 sing 411 n n 
C23 H12 WE9 sing 412 n n 
C23 H13 WE9 sing 413 n n 
C03 H14 WE9 sing 414 n n 
C04 H15 WE9 sing 415 n n 
C05 H16 WE9 sing 416 n n 
C17 H17 WE9 sing 417 n n 
C17 H18 WE9 sing 418 n n 
N08 H19 WE9 sing 419 n n 
#
_atom_sites.entry_id                     8E9Y 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          F 
_pdbx_nonpoly_scheme.entity_id        6 
_pdbx_nonpoly_scheme.mon_id           WE9 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      801 
_pdbx_nonpoly_scheme.auth_seq_num     601 
_pdbx_nonpoly_scheme.pdb_mon_id       WE9 
_pdbx_nonpoly_scheme.auth_mon_id      CNO 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 WE9 . . . F 6 120.385 120.387 102.749 1 55.27 ? C10 WE9 801 A 1 
HETATM 2 C C11 WE9 . . . F 6 120.644 120.192 104.102 1 56.48 ? C11 WE9 801 A 1 
HETATM 3 C C12 WE9 . . . F 6 121.792 119.494 104.499 1 51.75 ? C12 WE9 801 A 1 
HETATM 4 C C13 WE9 . . . F 6 122.675 118.983 103.55 1 43.93 ? C13 WE9 801 A 1 
HETATM 5 C C14 WE9 . . . F 6 122.418 119.185 102.169 1 39.36 ? C14 WE9 801 A 1 
HETATM 6 C C15 WE9 . . . F 6 123.429 118.608 101.129 1 45.03 ? C15 WE9 801 A 1 
HETATM 7 C C18 WE9 . . . F 6 127.226 118.358 100.389 1 45.83 ? C18 WE9 801 A 1 
HETATM 8 C C20 WE9 . . . F 6 127.083 120.632 99.917 1 47.38 ? C20 WE9 801 A 1 
HETATM 9 C C22 WE9 . . . F 6 126.757 119.937 102.127 1 46 ? C22 WE9 801 A 1 
HETATM 10 C C23 WE9 . . . F 6 125.699 118.903 102.502 1 46.29 ? C23 WE9 801 A 1 
HETATM 11 N N24 WE9 . . . F 6 122.971 118.127 99.846 1 45.8 ? N24 WE9 801 A 1 
HETATM 12 C C02 WE9 . . . F 6 120.222 116.898 97.661 1 44.71 ? C02 WE9 801 A 1 
HETATM 13 C C03 WE9 . . . F 6 119.227 117.85 97.898 1 47.35 ? C03 WE9 801 A 1 
HETATM 14 C C04 WE9 . . . F 6 119.45 118.907 98.785 1 53.27 ? C04 WE9 801 A 1 
HETATM 15 C C05 WE9 . . . F 6 121.44 116.994 98.304 1 41.7 ? C05 WE9 801 A 1 
HETATM 16 C C06 WE9 . . . F 6 121.651 118.059 99.213 1 43.69 ? C06 WE9 801 A 1 
HETATM 17 C C07 WE9 . . . F 6 120.696 119.005 99.433 1 52.28 ? C07 WE9 801 A 1 
HETATM 18 C C09 WE9 . . . F 6 121.298 119.873 101.791 1 46.14 ? C09 WE9 801 A 1 
HETATM 19 C C17 WE9 . . . F 6 125.76 117.953 100.257 1 46.81 ? C17 WE9 801 A 1 
HETATM 20 N N08 WE9 . . . F 6 120.95 120.1 100.379 1 53.45 ? N08 WE9 801 A 1 
HETATM 21 N N16 WE9 . . . F 6 124.875 118.514 101.317 1 45.78 ? N16 WE9 801 A 1 
HETATM 22 N N19 WE9 . . . F 6 127.452 119.657 100.925 1 48.51 ? N19 WE9 801 A 1 
HETATM 23 O O21 WE9 . . . F 6 128.875 119.791 101.19 1 59 ? O21 WE9 801 A 1 
HETATM 24 CL CL01 WE9 . . . F 6 119.922 115.555 96.528 1 69.92 ? CL01 WE9 801 A 1 
#
_model_server_stats.io_time_ms              73 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           24 
#