data_8E9Z # _model_server_result.job_id wC6zOJBktKGxD2Uy0cmgnQ _model_server_result.datetime_utc '2024-12-27 02:35:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8e9z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":802}' # _entry.id 8E9Z # _exptl.entry_id 8E9Z _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8E9Z _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8E9Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 141 1_555 A SG CYS 176 A CYS 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 292 A CYS 517 1_555 A SG CYS 295 A CYS 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 E SG CYS 159 E CYS 147 1_555 E SG CYS 229 E CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 405 n n CBA CAB Y01 sing 406 n n CBA CAN Y01 sing 407 n n CAN CAJ Y01 sing 408 n n CAJ CAO Y01 sing 409 n n CAO CBB Y01 sing 410 n n CBB CAC Y01 sing 411 n n CBB CBE Y01 sing 412 n n CBE CAP Y01 sing 413 n n CBE CBI Y01 sing 414 n n CAP CAQ Y01 sing 415 n n CAQ CBG Y01 sing 416 n n CBG CBI Y01 sing 417 n n CBG CBD Y01 sing 418 n n CBI CAE Y01 sing 419 n n CBI CAU Y01 sing 420 n n CAU CAS Y01 sing 421 n n CAS CBF Y01 sing 422 n n CBF CBD Y01 sing 423 n n CBF CBH Y01 sing 424 n n CBD CAK Y01 sing 425 n n CAK CAI Y01 sing 426 n n CAI CAZ Y01 doub 427 n n CAZ CAV Y01 sing 428 n n CAZ CBH Y01 sing 429 n n CAV CBC Y01 sing 430 n n CBH CAD Y01 sing 431 n n CBH CAT Y01 sing 432 n n CAT CAR Y01 sing 433 n n CAR CBC Y01 sing 434 n n CBC OAW Y01 sing 435 n n OAW CAY Y01 sing 436 n n CAY OAG Y01 doub 437 n n CAY CAM Y01 sing 438 n n CAM CAL Y01 sing 439 n n CAL CAX Y01 sing 440 n n CAX OAH Y01 sing 441 n n CAX OAF Y01 doub 442 n n CAA HAA1 Y01 sing 443 n n CAA HAA2 Y01 sing 444 n n CAA HAA3 Y01 sing 445 n n CBA HBA Y01 sing 446 n n CAB HAB1 Y01 sing 447 n n CAB HAB2 Y01 sing 448 n n CAB HAB3 Y01 sing 449 n n CAN HAN1 Y01 sing 450 n n CAN HAN2 Y01 sing 451 n n CAJ HAJ1 Y01 sing 452 n n CAJ HAJ2 Y01 sing 453 n n CAO HAO1 Y01 sing 454 n n CAO HAO2 Y01 sing 455 n n CBB HBB Y01 sing 456 n n CAC HAC1 Y01 sing 457 n n CAC HAC2 Y01 sing 458 n n CAC HAC3 Y01 sing 459 n n CBE HBE Y01 sing 460 n n CAP HAP1 Y01 sing 461 n n CAP HAP2 Y01 sing 462 n n CAQ HAQ1 Y01 sing 463 n n CAQ HAQ2 Y01 sing 464 n n CBG HBG Y01 sing 465 n n CBD HBD Y01 sing 466 n n CAE HAE1 Y01 sing 467 n n CAE HAE2 Y01 sing 468 n n CAE HAE3 Y01 sing 469 n n CAU HAU1 Y01 sing 470 n n CAU HAU2 Y01 sing 471 n n CAS HAS1 Y01 sing 472 n n CAS HAS2 Y01 sing 473 n n CBF HBF Y01 sing 474 n n CAK HAK1 Y01 sing 475 n n CAK HAK2 Y01 sing 476 n n CAI HAI Y01 sing 477 n n CAV HAV1 Y01 sing 478 n n CAV HAV2 Y01 sing 479 n n CBC HBC Y01 sing 480 n n CAD HAD1 Y01 sing 481 n n CAD HAD2 Y01 sing 482 n n CAD HAD3 Y01 sing 483 n n CAT HAT1 Y01 sing 484 n n CAT HAT2 Y01 sing 485 n n CAR HAR1 Y01 sing 486 n n CAR HAR2 Y01 sing 487 n n CAM HAM1 Y01 sing 488 n n CAM HAM2 Y01 sing 489 n n CAL HAL1 Y01 sing 490 n n CAL HAL2 Y01 sing 491 n n OAH HAH Y01 sing 492 n n # _atom_sites.entry_id 8E9Z _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 IXO A 1 801 601 IXO IXO . G 7 Y01 A 1 802 602 Y01 Y01 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . G 7 140.004 121.534 146.709 1 64.11 ? CAA Y01 802 A 1 HETATM 2 C CBA Y01 . . . G 7 140.103 120.388 145.712 1 64.82 ? CBA Y01 802 A 1 HETATM 3 C CAB Y01 . . . G 7 139.53 119.12 146.343 1 61.57 ? CAB Y01 802 A 1 HETATM 4 C CAN Y01 . . . G 7 139.262 120.752 144.48 1 64.18 ? CAN Y01 802 A 1 HETATM 5 C CAJ Y01 . . . G 7 139.107 119.58 143.527 1 65.6 ? CAJ Y01 802 A 1 HETATM 6 C CAO Y01 . . . G 7 140.304 119.486 142.567 1 64.99 ? CAO Y01 802 A 1 HETATM 7 C CBB Y01 . . . G 7 139.932 120.011 141.145 1 64.93 ? CBB Y01 802 A 1 HETATM 8 C CAC Y01 . . . G 7 138.422 119.906 140.836 1 62.12 ? CAC Y01 802 A 1 HETATM 9 C CBE Y01 . . . G 7 140.46 121.449 140.848 1 63.3 ? CBE Y01 802 A 1 HETATM 10 C CAP Y01 . . . G 7 141.501 121.974 141.871 1 61.79 ? CAP Y01 802 A 1 HETATM 11 C CAQ Y01 . . . G 7 142.633 122.639 141.079 1 61.34 ? CAQ Y01 802 A 1 HETATM 12 C CBG Y01 . . . G 7 142.018 122.842 139.697 1 60.47 ? CBG Y01 802 A 1 HETATM 13 C CBI Y01 . . . G 7 141.211 121.538 139.499 1 63.32 ? CBI Y01 802 A 1 HETATM 14 C CAE Y01 . . . G 7 142.149 120.297 139.348 1 62.67 ? CAE Y01 802 A 1 HETATM 15 C CAU Y01 . . . G 7 140.322 121.742 138.268 1 61.86 ? CAU Y01 802 A 1 HETATM 16 C CAS Y01 . . . G 7 141.194 122.014 137.036 1 60.23 ? CAS Y01 802 A 1 HETATM 17 C CBF Y01 . . . G 7 142.188 123.188 137.209 1 58.72 ? CBF Y01 802 A 1 HETATM 18 C CBD Y01 . . . G 7 142.973 123.067 138.53 1 61.51 ? CBD Y01 802 A 1 HETATM 19 C CAK Y01 . . . G 7 143.786 124.338 138.75 1 62.39 ? CAK Y01 802 A 1 HETATM 20 C CAI Y01 . . . G 7 144.661 124.582 137.575 1 62.93 ? CAI Y01 802 A 1 HETATM 21 C CAZ Y01 . . . G 7 144.409 124.098 136.369 1 66.3 ? CAZ Y01 802 A 1 HETATM 22 C CAV Y01 . . . G 7 145.358 124.401 135.245 1 63.78 ? CAV Y01 802 A 1 HETATM 23 C CBH Y01 . . . G 7 143.21 123.24 136.037 1 63.23 ? CBH Y01 802 A 1 HETATM 24 C CAD Y01 . . . G 7 143.723 121.82 135.711 1 64.74 ? CAD Y01 802 A 1 HETATM 25 C CAT Y01 . . . G 7 142.517 123.839 134.814 1 56.71 ? CAT Y01 802 A 1 HETATM 26 C CAR Y01 . . . G 7 143.489 123.985 133.645 1 58.84 ? CAR Y01 802 A 1 HETATM 27 C CBC Y01 . . . G 7 144.593 124.968 134.045 1 64.73 ? CBC Y01 802 A 1 HETATM 28 O OAW Y01 . . . G 7 145.488 125.08 132.956 1 68.96 ? OAW Y01 802 A 1 HETATM 29 C CAY Y01 . . . G 7 145.047 125.822 131.888 1 66.15 ? CAY Y01 802 A 1 HETATM 30 O OAG Y01 . . . G 7 144.552 126.909 132.125 1 62.83 ? OAG Y01 802 A 1 HETATM 31 C CAM Y01 . . . G 7 145.232 125.204 130.531 1 62.63 ? CAM Y01 802 A 1 HETATM 32 C CAL Y01 . . . G 7 144.158 125.757 129.603 1 63.55 ? CAL Y01 802 A 1 HETATM 33 C CAX Y01 . . . G 7 142.934 124.826 129.485 1 65.48 ? CAX Y01 802 A 1 HETATM 34 O OAH Y01 . . . G 7 142.378 124.479 130.542 1 64.58 ? OAH Y01 802 A 1 HETATM 35 O OAF Y01 . . . G 7 142.582 124.481 128.319 1 63.48 ? OAF Y01 802 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #