data_8EA5 # _model_server_result.job_id c8J9HFF0QY2eiricdJoGRA _model_server_result.datetime_utc '2025-01-10 11:56:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ea5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 8EA5 # _exptl.entry_id 8EA5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.75 _cell.angle_gamma 90 _cell.entry_id 8EA5 _cell.length_a 89.107 _cell.length_b 43.671 _cell.length_c 77.766 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EA5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 A CYS 96 1_555 A SG CYS 18 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 A SG CYS 12 A CYS 99 1_555 A SG CYS 23 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf3 A SG CYS 40 A CYS 127 1_555 A SG CYS 124 A CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 A SG CYS 102 A CYS 189 1_555 A SG CYS 116 A CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf5 B SG CYS 9 B CYS 96 1_555 B SG CYS 18 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf6 B SG CYS 12 B CYS 99 1_555 B SG CYS 23 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 B SG CYS 40 B CYS 127 1_555 B SG CYS 124 B CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf8 B SG CYS 102 B CYS 189 1_555 B SG CYS 116 B CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 237 n n C1 C2 PGE sing 238 n n C1 H1 PGE sing 239 n n C1 H12 PGE sing 240 n n O1 HO1 PGE sing 241 n n C2 O2 PGE sing 242 n n C2 H2 PGE sing 243 n n C2 H22 PGE sing 244 n n O2 C3 PGE sing 245 n n C3 C4 PGE sing 246 n n C3 H3 PGE sing 247 n n C3 H32 PGE sing 248 n n C4 O3 PGE sing 249 n n C4 H4 PGE sing 250 n n C4 H42 PGE sing 251 n n O4 C6 PGE sing 252 n n O4 HO4 PGE sing 253 n n C6 C5 PGE sing 254 n n C6 H6 PGE sing 255 n n C6 H62 PGE sing 256 n n C5 O3 PGE sing 257 n n C5 H5 PGE sing 258 n n C5 H52 PGE sing 259 n n # _atom_sites.entry_id 8EA5 _atom_sites.fract_transf_matrix[1][1] 0.011222 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005413 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022898 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014277 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 VN8 A 1 301 218 VN8 UNL . D 3 PGE A 1 302 301 PGE PGE . E 3 PGE B 1 301 217 PGE PGE . F 4 HOH A 1 401 358 HOH HOH . F 4 HOH A 2 402 335 HOH HOH . F 4 HOH A 3 403 341 HOH HOH . F 4 HOH A 4 404 333 HOH HOH . F 4 HOH A 5 405 366 HOH HOH . F 4 HOH A 6 406 313 HOH HOH . F 4 HOH A 7 407 304 HOH HOH . F 4 HOH A 8 408 320 HOH HOH . F 4 HOH A 9 409 328 HOH HOH . F 4 HOH A 10 410 318 HOH HOH . F 4 HOH A 11 411 308 HOH HOH . F 4 HOH A 12 412 309 HOH HOH . F 4 HOH A 13 413 321 HOH HOH . F 4 HOH A 14 414 360 HOH HOH . F 4 HOH A 15 415 354 HOH HOH . F 4 HOH A 16 416 343 HOH HOH . F 4 HOH A 17 417 342 HOH HOH . F 4 HOH A 18 418 345 HOH HOH . F 4 HOH A 19 419 307 HOH HOH . F 4 HOH A 20 420 332 HOH HOH . F 4 HOH A 21 421 311 HOH HOH . F 4 HOH A 22 422 339 HOH HOH . F 4 HOH A 23 423 302 HOH HOH . F 4 HOH A 24 424 316 HOH HOH . F 4 HOH A 25 425 319 HOH HOH . F 4 HOH A 26 426 346 HOH HOH . F 4 HOH A 27 427 337 HOH HOH . F 4 HOH A 28 428 315 HOH HOH . F 4 HOH A 29 429 334 HOH HOH . F 4 HOH A 30 430 329 HOH HOH . F 4 HOH A 31 431 324 HOH HOH . F 4 HOH A 32 432 327 HOH HOH . F 4 HOH A 33 433 351 HOH HOH . F 4 HOH A 34 434 303 HOH HOH . F 4 HOH A 35 435 365 HOH HOH . F 4 HOH A 36 436 355 HOH HOH . F 4 HOH A 37 437 323 HOH HOH . F 4 HOH A 38 438 340 HOH HOH . F 4 HOH A 39 439 326 HOH HOH . F 4 HOH A 40 440 325 HOH HOH . F 4 HOH A 41 441 336 HOH HOH . F 4 HOH A 42 442 348 HOH HOH . F 4 HOH A 43 443 361 HOH HOH . F 4 HOH A 44 444 306 HOH HOH . F 4 HOH A 45 445 312 HOH HOH . F 4 HOH A 46 446 314 HOH HOH . F 4 HOH A 47 447 353 HOH HOH . F 4 HOH A 48 448 322 HOH HOH . F 4 HOH A 49 449 356 HOH HOH . F 4 HOH A 50 450 357 HOH HOH . F 4 HOH A 51 451 369 HOH HOH . F 4 HOH A 52 452 352 HOH HOH . F 4 HOH A 53 453 359 HOH HOH . F 4 HOH A 54 454 344 HOH HOH . F 4 HOH A 55 455 305 HOH HOH . F 4 HOH A 56 456 367 HOH HOH . F 4 HOH A 57 457 347 HOH HOH . F 4 HOH A 58 458 338 HOH HOH . F 4 HOH A 59 459 331 HOH HOH . F 4 HOH A 60 460 317 HOH HOH . F 4 HOH A 61 461 362 HOH HOH . F 4 HOH A 62 462 310 HOH HOH . F 4 HOH A 63 463 350 HOH HOH . F 4 HOH A 64 464 363 HOH HOH . F 4 HOH A 65 465 270 HOH HOH . F 4 HOH A 66 466 364 HOH HOH . F 4 HOH A 67 467 349 HOH HOH . F 4 HOH A 68 468 330 HOH HOH . F 4 HOH A 69 469 368 HOH HOH . G 4 HOH B 1 401 263 HOH HOH . G 4 HOH B 2 402 264 HOH HOH . G 4 HOH B 3 403 271 HOH HOH . G 4 HOH B 4 404 234 HOH HOH . G 4 HOH B 5 405 249 HOH HOH . G 4 HOH B 6 406 230 HOH HOH . G 4 HOH B 7 407 257 HOH HOH . G 4 HOH B 8 408 219 HOH HOH . G 4 HOH B 9 409 225 HOH HOH . G 4 HOH B 10 410 255 HOH HOH . G 4 HOH B 11 411 247 HOH HOH . G 4 HOH B 12 412 221 HOH HOH . G 4 HOH B 13 413 226 HOH HOH . G 4 HOH B 14 414 229 HOH HOH . G 4 HOH B 15 415 237 HOH HOH . G 4 HOH B 16 416 251 HOH HOH . G 4 HOH B 17 417 240 HOH HOH . G 4 HOH B 18 418 275 HOH HOH . G 4 HOH B 19 419 269 HOH HOH . G 4 HOH B 20 420 253 HOH HOH . G 4 HOH B 21 421 231 HOH HOH . G 4 HOH B 22 422 227 HOH HOH . G 4 HOH B 23 423 274 HOH HOH . G 4 HOH B 24 424 220 HOH HOH . G 4 HOH B 25 425 232 HOH HOH . G 4 HOH B 26 426 245 HOH HOH . G 4 HOH B 27 427 267 HOH HOH . G 4 HOH B 28 428 254 HOH HOH . G 4 HOH B 29 429 235 HOH HOH . G 4 HOH B 30 430 239 HOH HOH . G 4 HOH B 31 431 272 HOH HOH . G 4 HOH B 32 432 262 HOH HOH . G 4 HOH B 33 433 238 HOH HOH . G 4 HOH B 34 434 244 HOH HOH . G 4 HOH B 35 435 248 HOH HOH . G 4 HOH B 36 436 243 HOH HOH . G 4 HOH B 37 437 250 HOH HOH . G 4 HOH B 38 438 246 HOH HOH . G 4 HOH B 39 439 261 HOH HOH . G 4 HOH B 40 440 252 HOH HOH . G 4 HOH B 41 441 256 HOH HOH . G 4 HOH B 42 442 233 HOH HOH . G 4 HOH B 43 443 260 HOH HOH . G 4 HOH B 44 444 222 HOH HOH . G 4 HOH B 45 445 228 HOH HOH . G 4 HOH B 46 446 276 HOH HOH . G 4 HOH B 47 447 224 HOH HOH . G 4 HOH B 48 448 258 HOH HOH . G 4 HOH B 49 449 236 HOH HOH . G 4 HOH B 50 450 242 HOH HOH . G 4 HOH B 51 451 223 HOH HOH . G 4 HOH B 52 452 268 HOH HOH . G 4 HOH B 53 453 241 HOH HOH . G 4 HOH B 54 454 259 HOH HOH . G 4 HOH B 55 455 273 HOH HOH . G 4 HOH B 56 456 265 HOH HOH . G 4 HOH B 57 457 266 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . E 3 7.653 -28.252 10.789 1 41.05 ? C1 PGE 301 B 1 HETATM 2 O O1 PGE . . . E 3 8.381 -28.592 9.575 1 52.63 ? O1 PGE 301 B 1 HETATM 3 C C2 PGE . . . E 3 6.922 -29.31 11.576 1 35.48 ? C2 PGE 301 B 1 HETATM 4 O O2 PGE . . . E 3 5.876 -29.889 10.801 1 40.1 ? O2 PGE 301 B 1 HETATM 5 C C3 PGE . . . E 3 5.262 -30.944 11.521 1 40.86 ? C3 PGE 301 B 1 HETATM 6 C C4 PGE . . . E 3 4.267 -31.647 10.603 1 39.04 ? C4 PGE 301 B 1 HETATM 7 O O4 PGE . . . E 3 6.195 -33.245 7.286 1 53.41 ? O4 PGE 301 B 1 HETATM 8 C C6 PGE . . . E 3 4.791 -33.055 7.107 1 37.63 ? C6 PGE 301 B 1 HETATM 9 C C5 PGE . . . E 3 4.221 -32.728 8.491 1 37.92 ? C5 PGE 301 B 1 HETATM 10 O O3 PGE . . . E 3 4.992 -31.914 9.395 1 42.17 ? O3 PGE 301 B 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #