data_8EA9 # _model_server_result.job_id PtX8rsawBhR3iB9jkWMA5g _model_server_result.datetime_utc '2025-01-10 11:13:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ea9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 8EA9 # _exptl.entry_id 8EA9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.83 _cell.angle_gamma 90 _cell.entry_id 8EA9 _cell.length_a 99.719 _cell.length_b 43.4 _cell.length_c 64.777 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EA9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 B CYS 96 1_555 A SG CYS 18 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 A SG CYS 12 B CYS 99 1_555 A SG CYS 23 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf3 A SG CYS 40 B CYS 127 1_555 A SG CYS 124 B CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 102 B CYS 189 1_555 A SG CYS 116 B CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf5 B SG CYS 9 A CYS 96 1_555 B SG CYS 18 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf6 B SG CYS 12 A CYS 99 1_555 B SG CYS 23 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf7 B SG CYS 40 A CYS 127 1_555 B SG CYS 124 A CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf8 B SG CYS 102 A CYS 189 1_555 B SG CYS 116 A CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 283 n n C1 C2 PGE sing 284 n n C1 H1 PGE sing 285 n n C1 H12 PGE sing 286 n n O1 HO1 PGE sing 287 n n C2 O2 PGE sing 288 n n C2 H2 PGE sing 289 n n C2 H22 PGE sing 290 n n O2 C3 PGE sing 291 n n C3 C4 PGE sing 292 n n C3 H3 PGE sing 293 n n C3 H32 PGE sing 294 n n C4 O3 PGE sing 295 n n C4 H4 PGE sing 296 n n C4 H42 PGE sing 297 n n O4 C6 PGE sing 298 n n O4 HO4 PGE sing 299 n n C6 C5 PGE sing 300 n n C6 H6 PGE sing 301 n n C6 H62 PGE sing 302 n n C5 O3 PGE sing 303 n n C5 H5 PGE sing 304 n n C5 H52 PGE sing 305 n n # _atom_sites.entry_id 8EA9 _atom_sites.fract_transf_matrix[1][1] 0.010028 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002284 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023041 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015833 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGE B 1 301 217 PGE PGE . D 3 VMQ B 1 302 218 VMQ UNL . E 4 PEG A 1 301 216 PEG PEG . F 4 PEG A 1 302 216 PEG PEG . G 5 PG4 A 1 303 217 PG4 PG4 . H 6 HOH B 1 401 267 HOH HOH . H 6 HOH B 2 402 261 HOH HOH . H 6 HOH B 3 403 290 HOH HOH . H 6 HOH B 4 404 298 HOH HOH . H 6 HOH B 5 405 234 HOH HOH . H 6 HOH B 6 406 226 HOH HOH . H 6 HOH B 7 407 283 HOH HOH . H 6 HOH B 8 408 270 HOH HOH . H 6 HOH B 9 409 240 HOH HOH . H 6 HOH B 10 410 224 HOH HOH . H 6 HOH B 11 411 239 HOH HOH . H 6 HOH B 12 412 247 HOH HOH . H 6 HOH B 13 413 223 HOH HOH . H 6 HOH B 14 414 284 HOH HOH . H 6 HOH B 15 415 238 HOH HOH . H 6 HOH B 16 416 229 HOH HOH . H 6 HOH B 17 417 227 HOH HOH . H 6 HOH B 18 418 285 HOH HOH . H 6 HOH B 19 419 219 HOH HOH . H 6 HOH B 20 420 222 HOH HOH . H 6 HOH B 21 421 273 HOH HOH . H 6 HOH B 22 422 253 HOH HOH . H 6 HOH B 23 423 269 HOH HOH . H 6 HOH B 24 424 277 HOH HOH . H 6 HOH B 25 425 235 HOH HOH . H 6 HOH B 26 426 292 HOH HOH . H 6 HOH B 27 427 252 HOH HOH . H 6 HOH B 28 428 272 HOH HOH . H 6 HOH B 29 429 225 HOH HOH . H 6 HOH B 30 430 246 HOH HOH . H 6 HOH B 31 431 241 HOH HOH . H 6 HOH B 32 432 250 HOH HOH . H 6 HOH B 33 433 251 HOH HOH . H 6 HOH B 34 434 221 HOH HOH . H 6 HOH B 35 435 254 HOH HOH . H 6 HOH B 36 436 249 HOH HOH . H 6 HOH B 37 437 220 HOH HOH . H 6 HOH B 38 438 259 HOH HOH . H 6 HOH B 39 439 248 HOH HOH . H 6 HOH B 40 440 228 HOH HOH . H 6 HOH B 41 441 275 HOH HOH . H 6 HOH B 42 442 264 HOH HOH . H 6 HOH B 43 443 289 HOH HOH . H 6 HOH B 44 444 281 HOH HOH . H 6 HOH B 45 445 257 HOH HOH . H 6 HOH B 46 446 288 HOH HOH . H 6 HOH B 47 447 242 HOH HOH . H 6 HOH B 48 448 263 HOH HOH . H 6 HOH B 49 449 255 HOH HOH . H 6 HOH B 50 450 230 HOH HOH . H 6 HOH B 51 451 245 HOH HOH . H 6 HOH B 52 452 262 HOH HOH . H 6 HOH B 53 453 271 HOH HOH . H 6 HOH B 54 454 233 HOH HOH . H 6 HOH B 55 455 265 HOH HOH . H 6 HOH B 56 456 280 HOH HOH . H 6 HOH B 57 457 276 HOH HOH . H 6 HOH B 58 458 232 HOH HOH . H 6 HOH B 59 459 236 HOH HOH . H 6 HOH B 60 460 260 HOH HOH . H 6 HOH B 61 461 268 HOH HOH . H 6 HOH B 62 462 279 HOH HOH . H 6 HOH B 63 463 237 HOH HOH . H 6 HOH B 64 464 297 HOH HOH . H 6 HOH B 65 465 294 HOH HOH . H 6 HOH B 66 466 286 HOH HOH . H 6 HOH B 67 467 244 HOH HOH . H 6 HOH B 68 468 296 HOH HOH . H 6 HOH B 69 469 278 HOH HOH . H 6 HOH B 70 470 266 HOH HOH . H 6 HOH B 71 471 258 HOH HOH . H 6 HOH B 72 472 295 HOH HOH . H 6 HOH B 73 473 274 HOH HOH . H 6 HOH B 74 474 291 HOH HOH . H 6 HOH B 75 475 287 HOH HOH . H 6 HOH B 76 476 256 HOH HOH . I 6 HOH A 1 401 271 HOH HOH . I 6 HOH A 2 402 241 HOH HOH . I 6 HOH A 3 403 242 HOH HOH . I 6 HOH A 4 404 283 HOH HOH . I 6 HOH A 5 405 230 HOH HOH . I 6 HOH A 6 406 220 HOH HOH . I 6 HOH A 7 407 238 HOH HOH . I 6 HOH A 8 408 284 HOH HOH . I 6 HOH A 9 409 290 HOH HOH . I 6 HOH A 10 410 236 HOH HOH . I 6 HOH A 11 411 221 HOH HOH . I 6 HOH A 12 412 274 HOH HOH . I 6 HOH A 13 413 263 HOH HOH . I 6 HOH A 14 414 259 HOH HOH . I 6 HOH A 15 415 229 HOH HOH . I 6 HOH A 16 416 225 HOH HOH . I 6 HOH A 17 417 226 HOH HOH . I 6 HOH A 18 418 244 HOH HOH . I 6 HOH A 19 419 232 HOH HOH . I 6 HOH A 20 420 235 HOH HOH . I 6 HOH A 21 421 240 HOH HOH . I 6 HOH A 22 422 249 HOH HOH . I 6 HOH A 23 423 254 HOH HOH . I 6 HOH A 24 424 218 HOH HOH . I 6 HOH A 25 425 279 HOH HOH . I 6 HOH A 26 426 228 HOH HOH . I 6 HOH A 27 427 252 HOH HOH . I 6 HOH A 28 428 266 HOH HOH . I 6 HOH A 29 429 277 HOH HOH . I 6 HOH A 30 430 219 HOH HOH . I 6 HOH A 31 431 293 HOH HOH . I 6 HOH A 32 432 256 HOH HOH . I 6 HOH A 33 433 261 HOH HOH . I 6 HOH A 34 434 243 HOH HOH . I 6 HOH A 35 435 237 HOH HOH . I 6 HOH A 36 436 265 HOH HOH . I 6 HOH A 37 437 268 HOH HOH . I 6 HOH A 38 438 260 HOH HOH . I 6 HOH A 39 439 278 HOH HOH . I 6 HOH A 40 440 222 HOH HOH . I 6 HOH A 41 441 231 HOH HOH . I 6 HOH A 42 442 289 HOH HOH . I 6 HOH A 43 443 267 HOH HOH . I 6 HOH A 44 444 223 HOH HOH . I 6 HOH A 45 445 280 HOH HOH . I 6 HOH A 46 446 231 HOH HOH . I 6 HOH A 47 447 273 HOH HOH . I 6 HOH A 48 448 245 HOH HOH . I 6 HOH A 49 449 257 HOH HOH . I 6 HOH A 50 450 227 HOH HOH . I 6 HOH A 51 451 246 HOH HOH . I 6 HOH A 52 452 234 HOH HOH . I 6 HOH A 53 453 285 HOH HOH . I 6 HOH A 54 454 233 HOH HOH . I 6 HOH A 55 455 247 HOH HOH . I 6 HOH A 56 456 264 HOH HOH . I 6 HOH A 57 457 224 HOH HOH . I 6 HOH A 58 458 270 HOH HOH . I 6 HOH A 59 459 272 HOH HOH . I 6 HOH A 60 460 248 HOH HOH . I 6 HOH A 61 461 258 HOH HOH . I 6 HOH A 62 462 253 HOH HOH . I 6 HOH A 63 463 281 HOH HOH . I 6 HOH A 64 464 255 HOH HOH . I 6 HOH A 65 465 262 HOH HOH . I 6 HOH A 66 466 239 HOH HOH . I 6 HOH A 67 467 251 HOH HOH . I 6 HOH A 68 468 269 HOH HOH . I 6 HOH A 69 469 291 HOH HOH . I 6 HOH A 70 470 275 HOH HOH . I 6 HOH A 71 471 288 HOH HOH . I 6 HOH A 72 472 243 HOH HOH . I 6 HOH A 73 473 276 HOH HOH . I 6 HOH A 74 474 250 HOH HOH . I 6 HOH A 75 475 282 HOH HOH . I 6 HOH A 76 476 286 HOH HOH . I 6 HOH A 77 477 287 HOH HOH . I 6 HOH A 78 478 282 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . C 2 12.446 -36.966 19.595 1 56.75 ? C1 PGE 301 B 1 HETATM 2 O O1 PGE . . . C 2 11.405 -36.773 18.644 1 52.84 ? O1 PGE 301 B 1 HETATM 3 C C2 PGE . . . C 2 11.858 -36.885 20.989 1 56.21 ? C2 PGE 301 B 1 HETATM 4 O O2 PGE . . . C 2 11.741 -35.532 21.386 1 54.77 ? O2 PGE 301 B 1 HETATM 5 C C3 PGE . . . C 2 10.962 -35.351 22.553 1 50.61 ? C3 PGE 301 B 1 HETATM 6 C C4 PGE . . . C 2 11.138 -33.936 23.073 1 45.83 ? C4 PGE 301 B 1 HETATM 7 O O4 PGE . . . C 2 9.274 -31.299 20.367 1 32.38 ? O4 PGE 301 B 1 HETATM 8 C C6 PGE . . . C 2 9.657 -30.885 21.677 1 28.6 ? C6 PGE 301 B 1 HETATM 9 C C5 PGE . . . C 2 9.741 -32.096 22.59 1 26.68 ? C5 PGE 301 B 1 HETATM 10 O O3 PGE . . . C 2 10.715 -32.997 22.1 1 32.49 ? O3 PGE 301 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #