data_8EAA
#
_model_server_result.job_id            vNKk_Ia2XE2nNTZONRiF3A 
_model_server_result.datetime_utc      '2025-01-10 11:01:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8eaa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":303}' 
#
_entry.id    8EAA 
#
_exptl.entry_id    8EAA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.49 
_cell.angle_gamma         90 
_cell.entry_id            8EAA 
_cell.length_a            100.013 
_cell.length_b            43.338 
_cell.length_c            67.109 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8EAA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 9 B CYS 96 1_555 A SG CYS 18 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf2 A SG CYS 12 B CYS 99 1_555 A SG CYS 23 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf3 A SG CYS 40 B CYS 127 1_555 A SG CYS 124 B CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 A SG CYS 102 B CYS 189 1_555 A SG CYS 116 B CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf5 B SG CYS 9 A CYS 96 1_555 B SG CYS 18 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf6 B SG CYS 12 A CYS 99 1_555 B SG CYS 23 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf7 B SG CYS 40 A CYS 127 1_555 B SG CYS 124 A CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
disulf ? disulf8 B SG CYS 102 A CYS 189 1_555 B SG CYS 116 A CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     8EAA 
_atom_sites.fract_transf_matrix[1][1]    0.009999 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00296 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023074 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01554 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 VMW B 1 301 218 VMW UNL . 
D 3 PEG A 1 301 217 PEG PEG . 
E 3 PEG A 1 302 216 PEG PEG . 
F 4 GOL A 1 303 217 GOL GOL . 
G 5 HOH B 1 401 242 HOH HOH . 
G 5 HOH B 2 402 313 HOH HOH . 
G 5 HOH B 3 403 250 HOH HOH . 
G 5 HOH B 4 404 271 HOH HOH . 
G 5 HOH B 5 405 277 HOH HOH . 
G 5 HOH B 6 406 308 HOH HOH . 
G 5 HOH B 7 407 273 HOH HOH . 
G 5 HOH B 8 408 236 HOH HOH . 
G 5 HOH B 9 409 281 HOH HOH . 
G 5 HOH B 10 410 227 HOH HOH . 
G 5 HOH B 11 411 252 HOH HOH . 
G 5 HOH B 12 412 309 HOH HOH . 
G 5 HOH B 13 413 232 HOH HOH . 
G 5 HOH B 14 414 229 HOH HOH . 
G 5 HOH B 15 415 247 HOH HOH . 
G 5 HOH B 16 416 235 HOH HOH . 
G 5 HOH B 17 417 292 HOH HOH . 
G 5 HOH B 18 418 245 HOH HOH . 
G 5 HOH B 19 419 301 HOH HOH . 
G 5 HOH B 20 420 283 HOH HOH . 
G 5 HOH B 21 421 254 HOH HOH . 
G 5 HOH B 22 422 315 HOH HOH . 
G 5 HOH B 23 423 260 HOH HOH . 
G 5 HOH B 24 424 264 HOH HOH . 
G 5 HOH B 25 425 222 HOH HOH . 
G 5 HOH B 26 426 220 HOH HOH . 
G 5 HOH B 27 427 223 HOH HOH . 
G 5 HOH B 28 428 262 HOH HOH . 
G 5 HOH B 29 429 311 HOH HOH . 
G 5 HOH B 30 430 238 HOH HOH . 
G 5 HOH B 31 431 278 HOH HOH . 
G 5 HOH B 32 432 306 HOH HOH . 
G 5 HOH B 33 433 265 HOH HOH . 
G 5 HOH B 34 434 233 HOH HOH . 
G 5 HOH B 35 435 303 HOH HOH . 
G 5 HOH B 36 436 316 HOH HOH . 
G 5 HOH B 37 437 320 HOH HOH . 
G 5 HOH B 38 438 219 HOH HOH . 
G 5 HOH B 39 439 268 HOH HOH . 
G 5 HOH B 40 440 294 HOH HOH . 
G 5 HOH B 41 441 244 HOH HOH . 
G 5 HOH B 42 442 241 HOH HOH . 
G 5 HOH B 43 443 297 HOH HOH . 
G 5 HOH B 44 444 318 HOH HOH . 
G 5 HOH B 45 445 272 HOH HOH . 
G 5 HOH B 46 446 257 HOH HOH . 
G 5 HOH B 47 447 284 HOH HOH . 
G 5 HOH B 48 448 263 HOH HOH . 
G 5 HOH B 49 449 300 HOH HOH . 
G 5 HOH B 50 450 224 HOH HOH . 
G 5 HOH B 51 451 269 HOH HOH . 
G 5 HOH B 52 452 291 HOH HOH . 
G 5 HOH B 53 453 248 HOH HOH . 
G 5 HOH B 54 454 249 HOH HOH . 
G 5 HOH B 55 455 230 HOH HOH . 
G 5 HOH B 56 456 296 HOH HOH . 
G 5 HOH B 57 457 243 HOH HOH . 
G 5 HOH B 58 458 237 HOH HOH . 
G 5 HOH B 59 459 258 HOH HOH . 
G 5 HOH B 60 460 251 HOH HOH . 
G 5 HOH B 61 461 240 HOH HOH . 
G 5 HOH B 62 462 275 HOH HOH . 
G 5 HOH B 63 463 304 HOH HOH . 
G 5 HOH B 64 464 221 HOH HOH . 
G 5 HOH B 65 465 287 HOH HOH . 
G 5 HOH B 66 466 239 HOH HOH . 
G 5 HOH B 67 467 246 HOH HOH . 
G 5 HOH B 68 468 286 HOH HOH . 
G 5 HOH B 69 469 231 HOH HOH . 
G 5 HOH B 70 470 225 HOH HOH . 
G 5 HOH B 71 471 261 HOH HOH . 
G 5 HOH B 72 472 274 HOH HOH . 
G 5 HOH B 73 473 289 HOH HOH . 
G 5 HOH B 74 474 276 HOH HOH . 
G 5 HOH B 75 475 282 HOH HOH . 
G 5 HOH B 76 476 255 HOH HOH . 
G 5 HOH B 77 477 234 HOH HOH . 
G 5 HOH B 78 478 279 HOH HOH . 
G 5 HOH B 79 479 295 HOH HOH . 
G 5 HOH B 80 480 285 HOH HOH . 
G 5 HOH B 81 481 253 HOH HOH . 
G 5 HOH B 82 482 290 HOH HOH . 
G 5 HOH B 83 483 298 HOH HOH . 
G 5 HOH B 84 484 259 HOH HOH . 
G 5 HOH B 85 485 228 HOH HOH . 
G 5 HOH B 86 486 299 HOH HOH . 
G 5 HOH B 87 487 324 HOH HOH . 
G 5 HOH B 88 488 305 HOH HOH . 
G 5 HOH B 89 489 278 HOH HOH . 
G 5 HOH B 90 490 270 HOH HOH . 
G 5 HOH B 91 491 317 HOH HOH . 
G 5 HOH B 92 492 267 HOH HOH . 
G 5 HOH B 93 493 314 HOH HOH . 
G 5 HOH B 94 494 323 HOH HOH . 
G 5 HOH B 95 495 322 HOH HOH . 
G 5 HOH B 96 496 319 HOH HOH . 
G 5 HOH B 97 497 266 HOH HOH . 
G 5 HOH B 98 498 321 HOH HOH . 
G 5 HOH B 99 499 293 HOH HOH . 
G 5 HOH B 100 500 280 HOH HOH . 
G 5 HOH B 101 501 288 HOH HOH . 
G 5 HOH B 102 502 312 HOH HOH . 
G 5 HOH B 103 503 307 HOH HOH . 
G 5 HOH B 104 504 310 HOH HOH . 
G 5 HOH B 105 505 302 HOH HOH . 
H 5 HOH A 1 401 279 HOH HOH . 
H 5 HOH A 2 402 264 HOH HOH . 
H 5 HOH A 3 403 245 HOH HOH . 
H 5 HOH A 4 404 312 HOH HOH . 
H 5 HOH A 5 405 300 HOH HOH . 
H 5 HOH A 6 406 260 HOH HOH . 
H 5 HOH A 7 407 222 HOH HOH . 
H 5 HOH A 8 408 275 HOH HOH . 
H 5 HOH A 9 409 226 HOH HOH . 
H 5 HOH A 10 410 243 HOH HOH . 
H 5 HOH A 11 411 246 HOH HOH . 
H 5 HOH A 12 412 256 HOH HOH . 
H 5 HOH A 13 413 227 HOH HOH . 
H 5 HOH A 14 414 239 HOH HOH . 
H 5 HOH A 15 415 238 HOH HOH . 
H 5 HOH A 16 416 285 HOH HOH . 
H 5 HOH A 17 417 231 HOH HOH . 
H 5 HOH A 18 418 230 HOH HOH . 
H 5 HOH A 19 419 295 HOH HOH . 
H 5 HOH A 20 420 225 HOH HOH . 
H 5 HOH A 21 421 226 HOH HOH . 
H 5 HOH A 22 422 304 HOH HOH . 
H 5 HOH A 23 423 262 HOH HOH . 
H 5 HOH A 24 424 223 HOH HOH . 
H 5 HOH A 25 425 265 HOH HOH . 
H 5 HOH A 26 426 229 HOH HOH . 
H 5 HOH A 27 427 259 HOH HOH . 
H 5 HOH A 28 428 254 HOH HOH . 
H 5 HOH A 29 429 244 HOH HOH . 
H 5 HOH A 30 430 224 HOH HOH . 
H 5 HOH A 31 431 218 HOH HOH . 
H 5 HOH A 32 432 257 HOH HOH . 
H 5 HOH A 33 433 232 HOH HOH . 
H 5 HOH A 34 434 255 HOH HOH . 
H 5 HOH A 35 435 220 HOH HOH . 
H 5 HOH A 36 436 256 HOH HOH . 
H 5 HOH A 37 437 284 HOH HOH . 
H 5 HOH A 38 438 240 HOH HOH . 
H 5 HOH A 39 439 310 HOH HOH . 
H 5 HOH A 40 440 258 HOH HOH . 
H 5 HOH A 41 441 219 HOH HOH . 
H 5 HOH A 42 442 267 HOH HOH . 
H 5 HOH A 43 443 236 HOH HOH . 
H 5 HOH A 44 444 228 HOH HOH . 
H 5 HOH A 45 445 261 HOH HOH . 
H 5 HOH A 46 446 277 HOH HOH . 
H 5 HOH A 47 447 251 HOH HOH . 
H 5 HOH A 48 448 305 HOH HOH . 
H 5 HOH A 49 449 319 HOH HOH . 
H 5 HOH A 50 450 237 HOH HOH . 
H 5 HOH A 51 451 242 HOH HOH . 
H 5 HOH A 52 452 299 HOH HOH . 
H 5 HOH A 53 453 252 HOH HOH . 
H 5 HOH A 54 454 221 HOH HOH . 
H 5 HOH A 55 455 282 HOH HOH . 
H 5 HOH A 56 456 235 HOH HOH . 
H 5 HOH A 57 457 314 HOH HOH . 
H 5 HOH A 58 458 313 HOH HOH . 
H 5 HOH A 59 459 248 HOH HOH . 
H 5 HOH A 60 460 290 HOH HOH . 
H 5 HOH A 61 461 296 HOH HOH . 
H 5 HOH A 62 462 294 HOH HOH . 
H 5 HOH A 63 463 266 HOH HOH . 
H 5 HOH A 64 464 268 HOH HOH . 
H 5 HOH A 65 465 309 HOH HOH . 
H 5 HOH A 66 466 271 HOH HOH . 
H 5 HOH A 67 467 273 HOH HOH . 
H 5 HOH A 68 468 316 HOH HOH . 
H 5 HOH A 69 469 253 HOH HOH . 
H 5 HOH A 70 470 250 HOH HOH . 
H 5 HOH A 71 471 234 HOH HOH . 
H 5 HOH A 72 472 297 HOH HOH . 
H 5 HOH A 73 473 289 HOH HOH . 
H 5 HOH A 74 474 263 HOH HOH . 
H 5 HOH A 75 475 283 HOH HOH . 
H 5 HOH A 76 476 287 HOH HOH . 
H 5 HOH A 77 477 249 HOH HOH . 
H 5 HOH A 78 478 308 HOH HOH . 
H 5 HOH A 79 479 276 HOH HOH . 
H 5 HOH A 80 480 233 HOH HOH . 
H 5 HOH A 81 481 270 HOH HOH . 
H 5 HOH A 82 482 318 HOH HOH . 
H 5 HOH A 83 483 317 HOH HOH . 
H 5 HOH A 84 484 274 HOH HOH . 
H 5 HOH A 85 485 293 HOH HOH . 
H 5 HOH A 86 486 292 HOH HOH . 
H 5 HOH A 87 487 303 HOH HOH . 
H 5 HOH A 88 488 291 HOH HOH . 
H 5 HOH A 89 489 241 HOH HOH . 
H 5 HOH A 90 490 272 HOH HOH . 
H 5 HOH A 91 491 269 HOH HOH . 
H 5 HOH A 92 492 298 HOH HOH . 
H 5 HOH A 93 493 307 HOH HOH . 
H 5 HOH A 94 494 302 HOH HOH . 
H 5 HOH A 95 495 281 HOH HOH . 
H 5 HOH A 96 496 306 HOH HOH . 
H 5 HOH A 97 497 288 HOH HOH . 
H 5 HOH A 98 498 247 HOH HOH . 
H 5 HOH A 99 499 286 HOH HOH . 
H 5 HOH A 100 500 320 HOH HOH . 
H 5 HOH A 101 501 301 HOH HOH . 
H 5 HOH A 102 502 325 HOH HOH . 
H 5 HOH A 103 503 315 HOH HOH . 
H 5 HOH A 104 504 311 HOH HOH . 
H 5 HOH A 105 505 280 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 4 32.212 -7.343 27.9 1 36.6 ? C1 GOL 303 A 1 
HETATM 2 O O1 GOL . . . F 4 32.764 -8.526 28.431 1 39.29 ? O1 GOL 303 A 1 
HETATM 3 C C2 GOL . . . F 4 31.711 -6.448 29.082 1 34.51 ? C2 GOL 303 A 1 
HETATM 4 O O2 GOL . . . F 4 31.585 -5.111 28.712 1 34.15 ? O2 GOL 303 A 1 
HETATM 5 C C3 GOL . . . F 4 30.385 -7.101 29.451 1 27.01 ? C3 GOL 303 A 1 
HETATM 6 O O3 GOL . . . F 4 29.651 -6.185 30.089 1 28.73 ? O3 GOL 303 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           371 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           6 
#