data_8EAB # _model_server_result.job_id PZ5plEMnW9Q7gceKaRj25Q _model_server_result.datetime_utc '2025-01-10 12:08:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8eab # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 8EAB # _exptl.entry_id 8EAB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.87 _cell.angle_gamma 90 _cell.entry_id 8EAB _cell.length_a 101.621 _cell.length_b 42.874 _cell.length_c 67.881 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EAB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 A CYS 96 1_555 A SG CYS 18 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 12 A CYS 99 1_555 A SG CYS 23 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 A SG CYS 40 A CYS 127 1_555 A SG CYS 124 A CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf4 A SG CYS 102 A CYS 189 1_555 A SG CYS 116 A CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 B SG CYS 9 B CYS 96 1_555 B SG CYS 18 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 B SG CYS 12 B CYS 99 1_555 B SG CYS 23 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf7 B SG CYS 40 B CYS 127 1_555 B SG CYS 124 B CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf8 B SG CYS 102 B CYS 189 1_555 B SG CYS 116 B CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 237 n n C1 C2 PEG sing 238 n n C1 H11 PEG sing 239 n n C1 H12 PEG sing 240 n n O1 HO1 PEG sing 241 n n C2 O2 PEG sing 242 n n C2 H21 PEG sing 243 n n C2 H22 PEG sing 244 n n O2 C3 PEG sing 245 n n C3 C4 PEG sing 246 n n C3 H31 PEG sing 247 n n C3 H32 PEG sing 248 n n C4 O4 PEG sing 249 n n C4 H41 PEG sing 250 n n C4 H42 PEG sing 251 n n O4 HO4 PEG sing 252 n n # _atom_sites.entry_id 8EAB _atom_sites.fract_transf_matrix[1][1] 0.00984 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003173 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023324 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015478 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG B 1 301 217 PEG PEG . D 3 VN2 B 1 302 218 VN2 UNL . E 2 PEG B 1 303 215 PEG PEG . F 4 HOH A 1 301 237 HOH HOH . F 4 HOH A 2 302 240 HOH HOH . F 4 HOH A 3 303 317 HOH HOH . F 4 HOH A 4 304 242 HOH HOH . F 4 HOH A 5 305 260 HOH HOH . F 4 HOH A 6 306 254 HOH HOH . F 4 HOH A 7 307 239 HOH HOH . F 4 HOH A 8 308 322 HOH HOH . F 4 HOH A 9 309 223 HOH HOH . F 4 HOH A 10 310 273 HOH HOH . F 4 HOH A 11 311 263 HOH HOH . F 4 HOH A 12 312 279 HOH HOH . F 4 HOH A 13 313 243 HOH HOH . F 4 HOH A 14 314 264 HOH HOH . F 4 HOH A 15 315 229 HOH HOH . F 4 HOH A 16 316 225 HOH HOH . F 4 HOH A 17 317 246 HOH HOH . F 4 HOH A 18 318 258 HOH HOH . F 4 HOH A 19 319 303 HOH HOH . F 4 HOH A 20 320 236 HOH HOH . F 4 HOH A 21 321 318 HOH HOH . F 4 HOH A 22 322 282 HOH HOH . F 4 HOH A 23 323 220 HOH HOH . F 4 HOH A 24 324 257 HOH HOH . F 4 HOH A 25 325 234 HOH HOH . F 4 HOH A 26 326 226 HOH HOH . F 4 HOH A 27 327 268 HOH HOH . F 4 HOH A 28 328 255 HOH HOH . F 4 HOH A 29 329 247 HOH HOH . F 4 HOH A 30 330 308 HOH HOH . F 4 HOH A 31 331 265 HOH HOH . F 4 HOH A 32 332 249 HOH HOH . F 4 HOH A 33 333 306 HOH HOH . F 4 HOH A 34 334 248 HOH HOH . F 4 HOH A 35 335 227 HOH HOH . F 4 HOH A 36 336 219 HOH HOH . F 4 HOH A 37 337 266 HOH HOH . F 4 HOH A 38 338 222 HOH HOH . F 4 HOH A 39 339 252 HOH HOH . F 4 HOH A 40 340 221 HOH HOH . F 4 HOH A 41 341 313 HOH HOH . F 4 HOH A 42 342 241 HOH HOH . F 4 HOH A 43 343 224 HOH HOH . F 4 HOH A 44 344 231 HOH HOH . F 4 HOH A 45 345 232 HOH HOH . F 4 HOH A 46 346 278 HOH HOH . F 4 HOH A 47 347 288 HOH HOH . F 4 HOH A 48 348 327 HOH HOH . F 4 HOH A 49 349 315 HOH HOH . F 4 HOH A 50 350 311 HOH HOH . F 4 HOH A 51 351 245 HOH HOH . F 4 HOH A 52 352 253 HOH HOH . F 4 HOH A 53 353 275 HOH HOH . F 4 HOH A 54 354 287 HOH HOH . F 4 HOH A 55 355 305 HOH HOH . F 4 HOH A 56 356 309 HOH HOH . F 4 HOH A 57 357 320 HOH HOH . F 4 HOH A 58 358 333 HOH HOH . F 4 HOH A 59 359 277 HOH HOH . F 4 HOH A 60 360 261 HOH HOH . F 4 HOH A 61 361 230 HOH HOH . F 4 HOH A 62 362 319 HOH HOH . F 4 HOH A 63 363 233 HOH HOH . F 4 HOH A 64 364 302 HOH HOH . F 4 HOH A 65 365 250 HOH HOH . F 4 HOH A 66 366 269 HOH HOH . F 4 HOH A 67 367 295 HOH HOH . F 4 HOH A 68 368 298 HOH HOH . F 4 HOH A 69 369 310 HOH HOH . F 4 HOH A 70 370 256 HOH HOH . F 4 HOH A 71 371 325 HOH HOH . F 4 HOH A 72 372 272 HOH HOH . F 4 HOH A 73 373 228 HOH HOH . F 4 HOH A 74 374 301 HOH HOH . F 4 HOH A 75 375 238 HOH HOH . F 4 HOH A 76 376 304 HOH HOH . F 4 HOH A 77 377 259 HOH HOH . F 4 HOH A 78 378 299 HOH HOH . F 4 HOH A 79 379 283 HOH HOH . F 4 HOH A 80 380 280 HOH HOH . F 4 HOH A 81 381 293 HOH HOH . F 4 HOH A 82 382 294 HOH HOH . F 4 HOH A 83 383 330 HOH HOH . F 4 HOH A 84 384 331 HOH HOH . F 4 HOH A 85 385 262 HOH HOH . F 4 HOH A 86 386 251 HOH HOH . F 4 HOH A 87 387 286 HOH HOH . F 4 HOH A 88 388 235 HOH HOH . F 4 HOH A 89 389 282 HOH HOH . F 4 HOH A 90 390 297 HOH HOH . F 4 HOH A 91 391 292 HOH HOH . F 4 HOH A 92 392 291 HOH HOH . F 4 HOH A 93 393 271 HOH HOH . F 4 HOH A 94 394 324 HOH HOH . F 4 HOH A 95 395 244 HOH HOH . F 4 HOH A 96 396 328 HOH HOH . F 4 HOH A 97 397 281 HOH HOH . F 4 HOH A 98 398 276 HOH HOH . F 4 HOH A 99 399 230 HOH HOH . F 4 HOH A 100 400 323 HOH HOH . F 4 HOH A 101 401 267 HOH HOH . F 4 HOH A 102 402 300 HOH HOH . F 4 HOH A 103 403 289 HOH HOH . F 4 HOH A 104 404 329 HOH HOH . F 4 HOH A 105 405 316 HOH HOH . F 4 HOH A 106 406 314 HOH HOH . F 4 HOH A 107 407 326 HOH HOH . F 4 HOH A 108 408 296 HOH HOH . F 4 HOH A 109 409 332 HOH HOH . F 4 HOH A 110 410 284 HOH HOH . F 4 HOH A 111 411 312 HOH HOH . F 4 HOH A 112 412 307 HOH HOH . F 4 HOH A 113 413 270 HOH HOH . G 4 HOH B 1 401 258 HOH HOH . G 4 HOH B 2 402 290 HOH HOH . G 4 HOH B 3 403 246 HOH HOH . G 4 HOH B 4 404 238 HOH HOH . G 4 HOH B 5 405 273 HOH HOH . G 4 HOH B 6 406 236 HOH HOH . G 4 HOH B 7 407 267 HOH HOH . G 4 HOH B 8 408 232 HOH HOH . G 4 HOH B 9 409 219 HOH HOH . G 4 HOH B 10 410 289 HOH HOH . G 4 HOH B 11 411 291 HOH HOH . G 4 HOH B 12 412 234 HOH HOH . G 4 HOH B 13 413 226 HOH HOH . G 4 HOH B 14 414 248 HOH HOH . G 4 HOH B 15 415 280 HOH HOH . G 4 HOH B 16 416 216 HOH HOH . G 4 HOH B 17 417 235 HOH HOH . G 4 HOH B 18 418 268 HOH HOH . G 4 HOH B 19 419 264 HOH HOH . G 4 HOH B 20 420 227 HOH HOH . G 4 HOH B 21 421 253 HOH HOH . G 4 HOH B 22 422 261 HOH HOH . G 4 HOH B 23 423 254 HOH HOH . G 4 HOH B 24 424 218 HOH HOH . G 4 HOH B 25 425 244 HOH HOH . G 4 HOH B 26 426 252 HOH HOH . G 4 HOH B 27 427 224 HOH HOH . G 4 HOH B 28 428 231 HOH HOH . G 4 HOH B 29 429 237 HOH HOH . G 4 HOH B 30 430 271 HOH HOH . G 4 HOH B 31 431 287 HOH HOH . G 4 HOH B 32 432 220 HOH HOH . G 4 HOH B 33 433 249 HOH HOH . G 4 HOH B 34 434 288 HOH HOH . G 4 HOH B 35 435 281 HOH HOH . G 4 HOH B 36 436 283 HOH HOH . G 4 HOH B 37 437 266 HOH HOH . G 4 HOH B 38 438 243 HOH HOH . G 4 HOH B 39 439 217 HOH HOH . G 4 HOH B 40 440 257 HOH HOH . G 4 HOH B 41 441 259 HOH HOH . G 4 HOH B 42 442 278 HOH HOH . G 4 HOH B 43 443 242 HOH HOH . G 4 HOH B 44 444 221 HOH HOH . G 4 HOH B 45 445 256 HOH HOH . G 4 HOH B 46 446 228 HOH HOH . G 4 HOH B 47 447 260 HOH HOH . G 4 HOH B 48 448 262 HOH HOH . G 4 HOH B 49 449 247 HOH HOH . G 4 HOH B 50 450 225 HOH HOH . G 4 HOH B 51 451 274 HOH HOH . G 4 HOH B 52 452 255 HOH HOH . G 4 HOH B 53 453 222 HOH HOH . G 4 HOH B 54 454 277 HOH HOH . G 4 HOH B 55 455 269 HOH HOH . G 4 HOH B 56 456 263 HOH HOH . G 4 HOH B 57 457 270 HOH HOH . G 4 HOH B 58 458 223 HOH HOH . G 4 HOH B 59 459 275 HOH HOH . G 4 HOH B 60 460 251 HOH HOH . G 4 HOH B 61 461 285 HOH HOH . G 4 HOH B 62 462 229 HOH HOH . G 4 HOH B 63 463 245 HOH HOH . G 4 HOH B 64 464 241 HOH HOH . G 4 HOH B 65 465 284 HOH HOH . G 4 HOH B 66 466 265 HOH HOH . G 4 HOH B 67 467 274 HOH HOH . G 4 HOH B 68 468 240 HOH HOH . G 4 HOH B 69 469 239 HOH HOH . G 4 HOH B 70 470 290 HOH HOH . G 4 HOH B 71 471 279 HOH HOH . G 4 HOH B 72 472 292 HOH HOH . G 4 HOH B 73 473 233 HOH HOH . G 4 HOH B 74 474 321 HOH HOH . G 4 HOH B 75 475 250 HOH HOH . G 4 HOH B 76 476 286 HOH HOH . G 4 HOH B 77 477 285 HOH HOH . G 4 HOH B 78 478 272 HOH HOH . G 4 HOH B 79 479 276 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 2 10.758 -19.582 11.387 1 36.09 ? C1 PEG 303 B 1 HETATM 2 O O1 PEG . . . E 2 12.15 -19.548 11.542 1 47.91 ? O1 PEG 303 B 1 HETATM 3 C C2 PEG . . . E 2 10.234 -18.219 10.935 1 30.2 ? C2 PEG 303 B 1 HETATM 4 O O2 PEG . . . E 2 10.832 -17.205 11.704 1 40.21 ? O2 PEG 303 B 1 HETATM 5 C C3 PEG . . . E 2 9.921 -16.29 12.245 1 37.98 ? C3 PEG 303 B 1 HETATM 6 C C4 PEG . . . E 2 10.636 -15.073 12.834 1 37.96 ? C4 PEG 303 B 1 HETATM 7 O O4 PEG . . . E 2 11.795 -15.461 13.518 1 31.42 ? O4 PEG 303 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #