data_8EAD # _model_server_result.job_id S7QfUfw8xQaOg_bnPCl45w _model_server_result.datetime_utc '2024-11-22 00:36:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ead # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 8EAD # _exptl.entry_id 8EAD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8EAD _cell.length_a 37.953 _cell.length_b 44.416 _cell.length_c 78.646 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EAD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8EAD _atom_sites.fract_transf_matrix[1][1] 0.026348 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022514 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012715 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 201 201 EDO PEG . C 3 UY0 A 1 202 1 UY0 LIG . D 2 EDO A 1 203 1 EDO EDO . E 4 HOH A 1 301 120 HOH HOH . E 4 HOH A 2 302 60 HOH HOH . E 4 HOH A 3 303 68 HOH HOH . E 4 HOH A 4 304 119 HOH HOH . E 4 HOH A 5 305 185 HOH HOH . E 4 HOH A 6 306 64 HOH HOH . E 4 HOH A 7 307 180 HOH HOH . E 4 HOH A 8 308 154 HOH HOH . E 4 HOH A 9 309 91 HOH HOH . E 4 HOH A 10 310 85 HOH HOH . E 4 HOH A 11 311 147 HOH HOH . E 4 HOH A 12 312 1 HOH HOH . E 4 HOH A 13 313 82 HOH HOH . E 4 HOH A 14 314 133 HOH HOH . E 4 HOH A 15 315 42 HOH HOH . E 4 HOH A 16 316 204 HOH HOH . E 4 HOH A 17 317 195 HOH HOH . E 4 HOH A 18 318 196 HOH HOH . E 4 HOH A 19 319 7 HOH HOH . E 4 HOH A 20 320 59 HOH HOH . E 4 HOH A 21 321 53 HOH HOH . E 4 HOH A 22 322 201 HOH HOH . E 4 HOH A 23 323 49 HOH HOH . E 4 HOH A 24 324 35 HOH HOH . E 4 HOH A 25 325 6 HOH HOH . E 4 HOH A 26 326 138 HOH HOH . E 4 HOH A 27 327 5 HOH HOH . E 4 HOH A 28 328 118 HOH HOH . E 4 HOH A 29 329 29 HOH HOH . E 4 HOH A 30 330 98 HOH HOH . E 4 HOH A 31 331 86 HOH HOH . E 4 HOH A 32 332 192 HOH HOH . E 4 HOH A 33 333 199 HOH HOH . E 4 HOH A 34 334 34 HOH HOH . E 4 HOH A 35 335 25 HOH HOH . E 4 HOH A 36 336 38 HOH HOH . E 4 HOH A 37 337 75 HOH HOH . E 4 HOH A 38 338 95 HOH HOH . E 4 HOH A 39 339 145 HOH HOH . E 4 HOH A 40 340 12 HOH HOH . E 4 HOH A 41 341 80 HOH HOH . E 4 HOH A 42 342 57 HOH HOH . E 4 HOH A 43 343 15 HOH HOH . E 4 HOH A 44 344 90 HOH HOH . E 4 HOH A 45 345 200 HOH HOH . E 4 HOH A 46 346 65 HOH HOH . E 4 HOH A 47 347 20 HOH HOH . E 4 HOH A 48 348 10 HOH HOH . E 4 HOH A 49 349 78 HOH HOH . E 4 HOH A 50 350 33 HOH HOH . E 4 HOH A 51 351 14 HOH HOH . E 4 HOH A 52 352 51 HOH HOH . E 4 HOH A 53 353 28 HOH HOH . E 4 HOH A 54 354 84 HOH HOH . E 4 HOH A 55 355 71 HOH HOH . E 4 HOH A 56 356 109 HOH HOH . E 4 HOH A 57 357 16 HOH HOH . E 4 HOH A 58 358 179 HOH HOH . E 4 HOH A 59 359 66 HOH HOH . E 4 HOH A 60 360 76 HOH HOH . E 4 HOH A 61 361 3 HOH HOH . E 4 HOH A 62 362 48 HOH HOH . E 4 HOH A 63 363 83 HOH HOH . E 4 HOH A 64 364 50 HOH HOH . E 4 HOH A 65 365 87 HOH HOH . E 4 HOH A 66 366 67 HOH HOH . E 4 HOH A 67 367 37 HOH HOH . E 4 HOH A 68 368 110 HOH HOH . E 4 HOH A 69 369 4 HOH HOH . E 4 HOH A 70 370 56 HOH HOH . E 4 HOH A 71 371 45 HOH HOH . E 4 HOH A 72 372 8 HOH HOH . E 4 HOH A 73 373 58 HOH HOH . E 4 HOH A 74 374 26 HOH HOH . E 4 HOH A 75 375 31 HOH HOH . E 4 HOH A 76 376 102 HOH HOH . E 4 HOH A 77 377 194 HOH HOH . E 4 HOH A 78 378 165 HOH HOH . E 4 HOH A 79 379 177 HOH HOH . E 4 HOH A 80 380 62 HOH HOH . E 4 HOH A 81 381 2 HOH HOH . E 4 HOH A 82 382 116 HOH HOH . E 4 HOH A 83 383 43 HOH HOH . E 4 HOH A 84 384 198 HOH HOH . E 4 HOH A 85 385 77 HOH HOH . E 4 HOH A 86 386 17 HOH HOH . E 4 HOH A 87 387 61 HOH HOH . E 4 HOH A 88 388 27 HOH HOH . E 4 HOH A 89 389 203 HOH HOH . E 4 HOH A 90 390 19 HOH HOH . E 4 HOH A 91 391 32 HOH HOH . E 4 HOH A 92 392 108 HOH HOH . E 4 HOH A 93 393 9 HOH HOH . E 4 HOH A 94 394 175 HOH HOH . E 4 HOH A 95 395 46 HOH HOH . E 4 HOH A 96 396 92 HOH HOH . E 4 HOH A 97 397 11 HOH HOH . E 4 HOH A 98 398 143 HOH HOH . E 4 HOH A 99 399 70 HOH HOH . E 4 HOH A 100 400 94 HOH HOH . E 4 HOH A 101 401 36 HOH HOH . E 4 HOH A 102 402 96 HOH HOH . E 4 HOH A 103 403 41 HOH HOH . E 4 HOH A 104 404 144 HOH HOH . E 4 HOH A 105 405 74 HOH HOH . E 4 HOH A 106 406 13 HOH HOH . E 4 HOH A 107 407 24 HOH HOH . E 4 HOH A 108 408 202 HOH HOH . E 4 HOH A 109 409 21 HOH HOH . E 4 HOH A 110 410 130 HOH HOH . E 4 HOH A 111 411 126 HOH HOH . E 4 HOH A 112 412 81 HOH HOH . E 4 HOH A 113 413 176 HOH HOH . E 4 HOH A 114 414 54 HOH HOH . E 4 HOH A 115 415 166 HOH HOH . E 4 HOH A 116 416 103 HOH HOH . E 4 HOH A 117 417 30 HOH HOH . E 4 HOH A 118 418 99 HOH HOH . E 4 HOH A 119 419 52 HOH HOH . E 4 HOH A 120 420 125 HOH HOH . E 4 HOH A 121 421 149 HOH HOH . E 4 HOH A 122 422 164 HOH HOH . E 4 HOH A 123 423 139 HOH HOH . E 4 HOH A 124 424 135 HOH HOH . E 4 HOH A 125 425 163 HOH HOH . E 4 HOH A 126 426 168 HOH HOH . E 4 HOH A 127 427 161 HOH HOH . E 4 HOH A 128 428 132 HOH HOH . E 4 HOH A 129 429 23 HOH HOH . E 4 HOH A 130 430 197 HOH HOH . E 4 HOH A 131 431 113 HOH HOH . E 4 HOH A 132 432 136 HOH HOH . E 4 HOH A 133 433 122 HOH HOH . E 4 HOH A 134 434 171 HOH HOH . E 4 HOH A 135 435 158 HOH HOH . E 4 HOH A 136 436 117 HOH HOH . E 4 HOH A 137 437 187 HOH HOH . E 4 HOH A 138 438 170 HOH HOH . E 4 HOH A 139 439 169 HOH HOH . E 4 HOH A 140 440 159 HOH HOH . E 4 HOH A 141 441 156 HOH HOH . E 4 HOH A 142 442 97 HOH HOH . E 4 HOH A 143 443 121 HOH HOH . E 4 HOH A 144 444 173 HOH HOH . E 4 HOH A 145 445 124 HOH HOH . E 4 HOH A 146 446 89 HOH HOH . E 4 HOH A 147 447 40 HOH HOH . E 4 HOH A 148 448 123 HOH HOH . E 4 HOH A 149 449 127 HOH HOH . E 4 HOH A 150 450 111 HOH HOH . E 4 HOH A 151 451 150 HOH HOH . E 4 HOH A 152 452 93 HOH HOH . E 4 HOH A 153 453 151 HOH HOH . E 4 HOH A 154 454 47 HOH HOH . E 4 HOH A 155 455 146 HOH HOH . E 4 HOH A 156 456 191 HOH HOH . E 4 HOH A 157 457 100 HOH HOH . E 4 HOH A 158 458 72 HOH HOH . E 4 HOH A 159 459 22 HOH HOH . E 4 HOH A 160 460 142 HOH HOH . E 4 HOH A 161 461 107 HOH HOH . E 4 HOH A 162 462 181 HOH HOH . E 4 HOH A 163 463 18 HOH HOH . E 4 HOH A 164 464 44 HOH HOH . E 4 HOH A 165 465 115 HOH HOH . E 4 HOH A 166 466 55 HOH HOH . E 4 HOH A 167 467 114 HOH HOH . E 4 HOH A 168 468 105 HOH HOH . E 4 HOH A 169 469 106 HOH HOH . E 4 HOH A 170 470 128 HOH HOH . E 4 HOH A 171 471 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 24.064 -1.595 6.985 1 23.52 ? C1 EDO 203 A 1 HETATM 2 O O1 EDO . . . D 2 22.907 -2.32 7.436 1 17.92 ? O1 EDO 203 A 1 HETATM 3 C C2 EDO . . . D 2 25.029 -2.53 6.257 1 21.81 ? C2 EDO 203 A 1 HETATM 4 O O2 EDO . . . D 2 25.411 -3.581 7.15 1 31.37 ? O2 EDO 203 A 1 HETATM 5 H H11 EDO . . . D 2 24.569 -1.141 7.841 1 28.25 ? H11 EDO 203 A 1 HETATM 6 H H12 EDO . . . D 2 23.755 -0.792 6.313 1 28.25 ? H12 EDO 203 A 1 HETATM 7 H HO1 EDO . . . D 2 22.363 -1.745 7.992 1 21.53 ? HO1 EDO 203 A 1 HETATM 8 H H21 EDO . . . D 2 24.547 -2.948 5.371 1 26.2 ? H21 EDO 203 A 1 HETATM 9 H H22 EDO . . . D 2 25.911 -1.977 5.93 1 26.2 ? H22 EDO 203 A 1 HETATM 10 H HO2 EDO . . . D 2 25.938 -4.235 6.671 1 37.67 ? HO2 EDO 203 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #