data_8EBR # _model_server_result.job_id 4jHfJ3sUV5RoUhcdD6Lw0w _model_server_result.datetime_utc '2024-11-06 01:46:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ebr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 8EBR # _exptl.entry_id 8EBR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 233.242 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description SULBACTAM _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.93 _cell.angle_gamma 90 _cell.entry_id 8EBR _cell.length_a 80.18 _cell.length_b 98.54 _cell.length_c 112.31 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EBR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B OG SER 44 B SER 70 1_555 H C7 TSL . B TSL 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale2 D OG SER 44 D SER 70 1_555 L C7 TSL . D TSL 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? # _chem_comp.formula 'C8 H11 N O5 S' _chem_comp.formula_weight 233.242 _chem_comp.id 0RN _chem_comp.mon_nstd_flag . _chem_comp.name SULBACTAM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(2S,5R)-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid 4,4-dioxide' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAF SAO 0RN doub 1 n n CG2 CB 0RN sing 2 n n CG1 CB 0RN sing 3 n n CB SAO 0RN sing 4 n n CB CA 0RN sing 5 n n SAO CAK 0RN sing 6 n n SAO OAE 0RN doub 7 n n CAK N 0RN sing 8 n n CAK CAH 0RN sing 9 n n CA C 0RN sing 10 n n CA N 0RN sing 11 n n OXT C 0RN doub 12 n n C O 0RN sing 13 n n N CAJ 0RN sing 14 n n CAH CAJ 0RN sing 15 n n CAJ OAD 0RN doub 16 n n CG2 H1 0RN sing 17 n n CG2 H2 0RN sing 18 n n CG2 H3 0RN sing 19 n n CG1 H4 0RN sing 20 n n CG1 H5 0RN sing 21 n n CG1 H6 0RN sing 22 n n CAK H7 0RN sing 23 n n CAH H8 0RN sing 24 n n CAH H9 0RN sing 25 n n CA H10 0RN sing 26 n n O H11 0RN sing 27 n n # _atom_sites.entry_id 8EBR _atom_sites.fract_transf_matrix[1][1] 0.012472 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004277 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010148 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009413 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 301 301 PO4 PO4 . F 3 0RN A 1 302 302 0RN 0RN . G 2 PO4 B 1 301 301 PO4 PO4 . H 4 TSL B 1 302 302 TSL TSL . I 2 PO4 C 1 301 301 PO4 PO4 . J 3 0RN C 1 302 302 0RN 0RN . K 2 PO4 D 1 301 301 PO4 PO4 . L 4 TSL D 1 302 302 TSL TSL . M 5 HOH A 1 401 401 HOH HOH . M 5 HOH A 2 402 402 HOH HOH . M 5 HOH A 3 403 403 HOH HOH . M 5 HOH A 4 404 404 HOH HOH . M 5 HOH A 5 405 405 HOH HOH . N 5 HOH B 1 401 401 HOH HOH . N 5 HOH B 2 402 402 HOH HOH . N 5 HOH B 3 403 403 HOH HOH . O 5 HOH C 1 401 401 HOH HOH . O 5 HOH C 2 402 402 HOH HOH . O 5 HOH C 3 403 403 HOH HOH . O 5 HOH C 4 404 404 HOH HOH . O 5 HOH C 5 405 405 HOH HOH . P 5 HOH D 1 401 401 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CG2 0RN . . . F 3 21.478 14.18 7.114 0.5 74.1 ? CG2 0RN 302 A 1 HETATM 2 C CB 0RN . . . F 3 20.452 13.542 8.048 0.5 76.97 ? CB 0RN 302 A 1 HETATM 3 C CG1 0RN . . . F 3 19.742 14.639 8.839 0.5 69.06 ? CG1 0RN 302 A 1 HETATM 4 S SAO 0RN . . . F 3 19.27 12.68 7.067 0.5 79.08 ? SAO 0RN 302 A 1 HETATM 5 O OAE 0RN . . . F 3 17.972 12.763 7.74 0.5 71.64 ? OAE 0RN 302 A 1 HETATM 6 O OAF 0RN . . . F 3 19.377 13.184 5.695 0.5 62.98 ? OAF 0RN 302 A 1 HETATM 7 C CAK 0RN . . . F 3 19.765 11.066 7.062 0.5 71.2 ? CAK 0RN 302 A 1 HETATM 8 C CAH 0RN . . . F 3 19.001 9.921 7.737 0.5 68.46 ? CAH 0RN 302 A 1 HETATM 9 C CAJ 0RN . . . F 3 19.412 10.264 9.098 0.5 73.12 ? CAJ 0RN 302 A 1 HETATM 10 O OAD 0RN . . . F 3 19.276 9.872 10.209 0.5 76.35 ? OAD 0RN 302 A 1 HETATM 11 N N 0RN . . . F 3 20.172 11.269 8.365 0.5 66.49 ? N 0RN 302 A 1 HETATM 12 C CA 0RN . . . F 3 21.059 12.603 8.984 0.5 69.8 ? CA 0RN 302 A 1 HETATM 13 C C 0RN . . . F 3 22.426 12.406 8.838 0.5 69.88 ? C 0RN 302 A 1 HETATM 14 O OXT 0RN . . . F 3 22.857 11.49 8.087 0.5 58.77 ? OXT 0RN 302 A 1 HETATM 15 O O 0RN . . . F 3 23.241 13.127 9.476 0.5 70.19 ? O 0RN 302 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #