data_8ECQ # _model_server_result.job_id 4HHQLH9EpPjVmKkhUhrpYQ _model_server_result.datetime_utc '2024-11-16 07:37:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ecq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 8ECQ # _exptl.entry_id 8ECQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ECQ _cell.length_a 66.373 _cell.length_b 66.373 _cell.length_c 232.768 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ECQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 L CYS 23 1_555 A SG CYS 89 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? disulf ? disulf2 A SG CYS 138 L CYS 134 1_555 A SG CYS 197 L CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 95 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf4 B SG CYS 109 H CYS 106 1_555 B SG CYS 125 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf5 B SG CYS 117 H CYS 114 1_555 B SG CYS 123 H CYS 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf6 B SG CYS 119 H CYS 116 1_555 B SG CYS 136 H CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? disulf ? disulf7 B SG CYS 130 H CYS 127 1_555 B SG CYS 135 H CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf8 B SG CYS 196 H CYS 193 1_555 B SG CYS 252 H CYS 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? covale ? covale1 B C PCA 1 H PCA 1 1_555 B N VAL 2 H VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 231 n n O1 C6 MES sing 232 n n C2 C3 MES sing 233 n n C2 H21 MES sing 234 n n C2 H22 MES sing 235 n n C3 N4 MES sing 236 n n C3 H31 MES sing 237 n n C3 H32 MES sing 238 n n N4 C5 MES sing 239 n n N4 C7 MES sing 240 n n N4 HN4 MES sing 241 n n C5 C6 MES sing 242 n n C5 H51 MES sing 243 n n C5 H52 MES sing 244 n n C6 H61 MES sing 245 n n C6 H62 MES sing 246 n n C7 C8 MES sing 247 n n C7 H71 MES sing 248 n n C7 H72 MES sing 249 n n C8 S MES sing 250 n n C8 H81 MES sing 251 n n C8 H82 MES sing 252 n n S O1S MES doub 253 n n S O2S MES doub 254 n n S O3S MES sing 255 n n # _atom_sites.entry_id 8ECQ _atom_sites.fract_transf_matrix[1][1] 0.015066 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015066 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004296 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL L 1 301 302 GOL GOL . D 3 GOL L 1 302 303 GOL GOL . E 4 MES H 1 301 301 MES MES . F 3 GOL H 1 302 304 GOL GOL . G 5 HOH L 1 401 63 HOH HOH . G 5 HOH L 2 402 22 HOH HOH . G 5 HOH L 3 403 83 HOH HOH . G 5 HOH L 4 404 51 HOH HOH . G 5 HOH L 5 405 26 HOH HOH . G 5 HOH L 6 406 56 HOH HOH . G 5 HOH L 7 407 141 HOH HOH . G 5 HOH L 8 408 93 HOH HOH . G 5 HOH L 9 409 34 HOH HOH . G 5 HOH L 10 410 23 HOH HOH . G 5 HOH L 11 411 53 HOH HOH . G 5 HOH L 12 412 35 HOH HOH . G 5 HOH L 13 413 9 HOH HOH . G 5 HOH L 14 414 58 HOH HOH . G 5 HOH L 15 415 95 HOH HOH . G 5 HOH L 16 416 102 HOH HOH . G 5 HOH L 17 417 98 HOH HOH . G 5 HOH L 18 418 10 HOH HOH . G 5 HOH L 19 419 74 HOH HOH . G 5 HOH L 20 420 135 HOH HOH . G 5 HOH L 21 421 4 HOH HOH . G 5 HOH L 22 422 79 HOH HOH . G 5 HOH L 23 423 81 HOH HOH . G 5 HOH L 24 424 146 HOH HOH . G 5 HOH L 25 425 21 HOH HOH . G 5 HOH L 26 426 156 HOH HOH . G 5 HOH L 27 427 67 HOH HOH . G 5 HOH L 28 428 20 HOH HOH . G 5 HOH L 29 429 27 HOH HOH . G 5 HOH L 30 430 62 HOH HOH . G 5 HOH L 31 431 12 HOH HOH . G 5 HOH L 32 432 72 HOH HOH . G 5 HOH L 33 433 17 HOH HOH . G 5 HOH L 34 434 61 HOH HOH . G 5 HOH L 35 435 151 HOH HOH . G 5 HOH L 36 436 127 HOH HOH . G 5 HOH L 37 437 96 HOH HOH . G 5 HOH L 38 438 148 HOH HOH . G 5 HOH L 39 439 73 HOH HOH . G 5 HOH L 40 440 55 HOH HOH . G 5 HOH L 41 441 143 HOH HOH . G 5 HOH L 42 442 3 HOH HOH . G 5 HOH L 43 443 68 HOH HOH . G 5 HOH L 44 444 103 HOH HOH . G 5 HOH L 45 445 5 HOH HOH . G 5 HOH L 46 446 163 HOH HOH . G 5 HOH L 47 447 105 HOH HOH . G 5 HOH L 48 448 112 HOH HOH . G 5 HOH L 49 449 128 HOH HOH . G 5 HOH L 50 450 50 HOH HOH . G 5 HOH L 51 451 65 HOH HOH . G 5 HOH L 52 452 78 HOH HOH . G 5 HOH L 53 453 123 HOH HOH . G 5 HOH L 54 454 140 HOH HOH . G 5 HOH L 55 455 139 HOH HOH . G 5 HOH L 56 456 161 HOH HOH . G 5 HOH L 57 457 45 HOH HOH . G 5 HOH L 58 458 162 HOH HOH . G 5 HOH L 59 459 159 HOH HOH . G 5 HOH L 60 460 131 HOH HOH . G 5 HOH L 61 461 104 HOH HOH . G 5 HOH L 62 462 138 HOH HOH . G 5 HOH L 63 463 144 HOH HOH . H 5 HOH H 1 401 90 HOH HOH . H 5 HOH H 2 402 47 HOH HOH . H 5 HOH H 3 403 145 HOH HOH . H 5 HOH H 4 404 24 HOH HOH . H 5 HOH H 5 405 111 HOH HOH . H 5 HOH H 6 406 29 HOH HOH . H 5 HOH H 7 407 82 HOH HOH . H 5 HOH H 8 408 25 HOH HOH . H 5 HOH H 9 409 28 HOH HOH . H 5 HOH H 10 410 76 HOH HOH . H 5 HOH H 11 411 38 HOH HOH . H 5 HOH H 12 412 59 HOH HOH . H 5 HOH H 13 413 6 HOH HOH . H 5 HOH H 14 414 8 HOH HOH . H 5 HOH H 15 415 75 HOH HOH . H 5 HOH H 16 416 31 HOH HOH . H 5 HOH H 17 417 30 HOH HOH . H 5 HOH H 18 418 129 HOH HOH . H 5 HOH H 19 419 107 HOH HOH . H 5 HOH H 20 420 130 HOH HOH . H 5 HOH H 21 421 126 HOH HOH . H 5 HOH H 22 422 153 HOH HOH . H 5 HOH H 23 423 110 HOH HOH . H 5 HOH H 24 424 2 HOH HOH . H 5 HOH H 25 425 87 HOH HOH . H 5 HOH H 26 426 16 HOH HOH . H 5 HOH H 27 427 66 HOH HOH . H 5 HOH H 28 428 92 HOH HOH . H 5 HOH H 29 429 57 HOH HOH . H 5 HOH H 30 430 39 HOH HOH . H 5 HOH H 31 431 11 HOH HOH . H 5 HOH H 32 432 60 HOH HOH . H 5 HOH H 33 433 94 HOH HOH . H 5 HOH H 34 434 36 HOH HOH . H 5 HOH H 35 435 33 HOH HOH . H 5 HOH H 36 436 15 HOH HOH . H 5 HOH H 37 437 44 HOH HOH . H 5 HOH H 38 438 19 HOH HOH . H 5 HOH H 39 439 118 HOH HOH . H 5 HOH H 40 440 80 HOH HOH . H 5 HOH H 41 441 77 HOH HOH . H 5 HOH H 42 442 69 HOH HOH . H 5 HOH H 43 443 117 HOH HOH . H 5 HOH H 44 444 70 HOH HOH . H 5 HOH H 45 445 49 HOH HOH . H 5 HOH H 46 446 124 HOH HOH . H 5 HOH H 47 447 122 HOH HOH . H 5 HOH H 48 448 18 HOH HOH . H 5 HOH H 49 449 64 HOH HOH . H 5 HOH H 50 450 84 HOH HOH . H 5 HOH H 51 451 106 HOH HOH . H 5 HOH H 52 452 99 HOH HOH . H 5 HOH H 53 453 1 HOH HOH . H 5 HOH H 54 454 100 HOH HOH . H 5 HOH H 55 455 142 HOH HOH . H 5 HOH H 56 456 157 HOH HOH . H 5 HOH H 57 457 108 HOH HOH . H 5 HOH H 58 458 14 HOH HOH . H 5 HOH H 59 459 88 HOH HOH . H 5 HOH H 60 460 154 HOH HOH . H 5 HOH H 61 461 150 HOH HOH . H 5 HOH H 62 462 155 HOH HOH . H 5 HOH H 63 463 137 HOH HOH . H 5 HOH H 64 464 119 HOH HOH . H 5 HOH H 65 465 71 HOH HOH . H 5 HOH H 66 466 160 HOH HOH . H 5 HOH H 67 467 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . E 4 -8.546 18.414 38.591 1 37.44 ? O1 MES 301 H 1 HETATM 2 C C2 MES . . . E 4 -8.403 18.109 39.977 1 37.45 ? C2 MES 301 H 1 HETATM 3 C C3 MES . . . E 4 -7.05 17.45 40.269 1 38.23 ? C3 MES 301 H 1 HETATM 4 N N4 MES . . . E 4 -6.832 16.338 39.353 1 39.89 ? N4 MES 301 H 1 HETATM 5 C C5 MES . . . E 4 -6.996 16.655 37.951 1 38.87 ? C5 MES 301 H 1 HETATM 6 C C6 MES . . . E 4 -8.402 17.234 37.783 1 39.52 ? C6 MES 301 H 1 HETATM 7 C C7 MES . . . E 4 -5.534 15.686 39.665 1 40.79 ? C7 MES 301 H 1 HETATM 8 C C8 MES . . . E 4 -5.531 14.249 39.157 1 45.35 ? C8 MES 301 H 1 HETATM 9 S S MES . . . E 4 -4.055 13.465 39.514 1 44.63 ? S MES 301 H 1 HETATM 10 O O1S MES . . . E 4 -2.901 14.298 39.15 1 43.7 ? O1S MES 301 H 1 HETATM 11 O O2S MES . . . E 4 -4.029 12.221 38.755 1 42.16 ? O2S MES 301 H 1 HETATM 12 O O3S MES . . . E 4 -4.057 13.182 40.962 1 43.25 ? O3S MES 301 H 1 HETATM 13 H H21 MES . . . E 4 -9.207 17.437 40.284 1 44.99 ? H21 MES 301 H 1 HETATM 14 H H22 MES . . . E 4 -8.491 19.028 40.561 1 44.99 ? H22 MES 301 H 1 HETATM 15 H H31 MES . . . E 4 -6.25 18.184 40.156 1 45.92 ? H31 MES 301 H 1 HETATM 16 H H32 MES . . . E 4 -7.031 17.089 41.3 1 45.92 ? H32 MES 301 H 1 HETATM 17 H HN4 MES . . . E 4 -7.577 15.676 39.513 1 47.91 ? HN4 MES 301 H 1 HETATM 18 H H51 MES . . . E 4 -6.244 17.379 37.632 1 46.68 ? H51 MES 301 H 1 HETATM 19 H H52 MES . . . E 4 -6.877 15.757 37.341 1 46.68 ? H52 MES 301 H 1 HETATM 20 H H61 MES . . . E 4 -9.145 16.491 38.081 1 47.47 ? H61 MES 301 H 1 HETATM 21 H H62 MES . . . E 4 -8.577 17.482 36.734 1 47.47 ? H62 MES 301 H 1 HETATM 22 H H71 MES . . . E 4 -5.368 15.695 40.744 1 48.99 ? H71 MES 301 H 1 HETATM 23 H H72 MES . . . E 4 -4.721 16.244 39.196 1 48.99 ? H72 MES 301 H 1 HETATM 24 H H81 MES . . . E 4 -6.354 13.7 39.618 1 54.46 ? H81 MES 301 H 1 HETATM 25 H H82 MES . . . E 4 -5.69 14.247 38.076 1 54.46 ? H82 MES 301 H 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 25 #