data_8EF5 # _model_server_result.job_id 8UOCIXuJrUsB5MHJ5uM4-g _model_server_result.datetime_utc '2024-11-24 18:18:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ef5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":501}' # _entry.id 8EF5 # _exptl.entry_id 8EF5 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 336.471 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-phenyl-N-[1-(2-phenylethyl)piperidin-4-yl]propanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8EF5 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EF5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 H N N ? 6 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 141 R CYS 142 1_555 A SG CYS 218 R CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 E SG CYS 160 E CYS 160 1_555 E SG CYS 230 E CYS 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 F SG CYS 141 M CYS 142 1_555 F SG CYS 218 M CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C22 H28 N2 O' _chem_comp.formula_weight 336.471 _chem_comp.id 7V7 _chem_comp.mon_nstd_flag . _chem_comp.name N-phenyl-N-[1-(2-phenylethyl)piperidin-4-yl]propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 C17 7V7 doub 1 n y C16 C15 7V7 sing 2 n y C17 C18 7V7 sing 3 n y C15 C14 7V7 doub 4 n y C18 C19 7V7 doub 5 n y C14 C19 7V7 sing 6 n y C14 C13 7V7 sing 7 n n C12 C13 7V7 sing 8 n n C12 N09 7V7 sing 9 n n C08 N09 7V7 sing 10 n n C08 C07 7V7 sing 11 n n N09 C10 7V7 sing 12 n n C10 C11 7V7 sing 13 n n O01 C02 7V7 doub 14 n n C07 C06 7V7 sing 15 n n C06 C11 7V7 sing 16 n n C06 N05 7V7 sing 17 n n C02 N05 7V7 sing 18 n n C02 C03 7V7 sing 19 n n N05 C20 7V7 sing 20 n n C04 C03 7V7 sing 21 n n C20 C21 7V7 doub 22 n y C20 C25 7V7 sing 23 n y C21 C22 7V7 sing 24 n y C25 C24 7V7 doub 25 n y C22 C23 7V7 doub 26 n y C24 C23 7V7 sing 27 n y C10 H102 7V7 sing 28 n n C10 H101 7V7 sing 29 n n C13 H131 7V7 sing 30 n n C13 H132 7V7 sing 31 n n C15 H151 7V7 sing 32 n n C17 H171 7V7 sing 33 n n C21 H211 7V7 sing 34 n n C22 H221 7V7 sing 35 n n C24 H241 7V7 sing 36 n n C03 H031 7V7 sing 37 n n C03 H032 7V7 sing 38 n n C04 H043 7V7 sing 39 n n C04 H041 7V7 sing 40 n n C04 H042 7V7 sing 41 n n C06 H061 7V7 sing 42 n n C07 H072 7V7 sing 43 n n C07 H071 7V7 sing 44 n n C08 H082 7V7 sing 45 n n C08 H081 7V7 sing 46 n n C11 H112 7V7 sing 47 n n C11 H111 7V7 sing 48 n n C12 H122 7V7 sing 49 n n C12 H121 7V7 sing 50 n n C16 H161 7V7 sing 51 n n C18 H181 7V7 sing 52 n n C19 H191 7V7 sing 53 n n C23 H231 7V7 sing 54 n n C25 H251 7V7 sing 55 n n # _atom_sites.entry_id 8EF5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 6 7V7 R 1 501 501 7V7 FET . I 7 CLR R 1 502 610 CLR CLR . J 7 CLR R 1 503 612 CLR CLR . K 7 CLR R 1 504 613 CLR CLR . L 7 CLR R 1 505 615 CLR CLR . M 7 CLR R 1 506 614 CLR CLR . N 6 7V7 M 1 501 501 7V7 FET . O 7 CLR M 1 502 614 CLR CLR . P 7 CLR M 1 503 610 CLR CLR . Q 7 CLR M 1 504 612 CLR CLR . R 7 CLR M 1 505 613 CLR CLR . S 7 CLR M 1 506 615 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 7V7 . . . H 6 100.235 104.651 127.976 1 76.18 ? C10 7V7 501 R 1 HETATM 2 C C13 7V7 . . . H 6 98.794 107.661 126.171 1 76.18 ? C13 7V7 501 R 1 HETATM 3 C C15 7V7 . . . H 6 97.3 106.989 124.253 1 76.18 ? C15 7V7 501 R 1 HETATM 4 C C17 7V7 . . . H 6 95.165 108.005 123.959 1 76.18 ? C17 7V7 501 R 1 HETATM 5 C C20 7V7 . . . H 6 103.046 105.328 131.34 1 76.18 ? C20 7V7 501 R 1 HETATM 6 C C21 7V7 . . . H 6 102.791 106.643 131.722 1 76.18 ? C21 7V7 501 R 1 HETATM 7 C C22 7V7 . . . H 6 102.324 106.953 132.988 1 76.18 ? C22 7V7 501 R 1 HETATM 8 C C24 7V7 . . . H 6 102.352 104.618 133.541 1 76.18 ? C24 7V7 501 R 1 HETATM 9 C C02 7V7 . . . H 6 104.948 105.011 129.68 1 76.18 ? C02 7V7 501 R 1 HETATM 10 C C03 7V7 . . . H 6 105.915 104.232 130.591 1 76.18 ? C03 7V7 501 R 1 HETATM 11 C C04 7V7 . . . H 6 106.692 103.182 129.772 1 76.18 ? C04 7V7 501 R 1 HETATM 12 C C06 7V7 . . . H 6 102.603 105.164 128.795 1 76.18 ? C06 7V7 501 R 1 HETATM 13 C C07 7V7 . . . H 6 102.422 106.566 128.186 1 76.18 ? C07 7V7 501 R 1 HETATM 14 C C08 7V7 . . . H 6 101.374 106.591 127.072 1 76.18 ? C08 7V7 501 R 1 HETATM 15 C C11 7V7 . . . H 6 101.247 104.518 129.116 1 76.18 ? C11 7V7 501 R 1 HETATM 16 C C12 7V7 . . . H 6 99.006 106.209 126.589 1 76.18 ? C12 7V7 501 R 1 HETATM 17 C C14 7V7 . . . H 6 97.493 107.78 125.374 1 76.18 ? C14 7V7 501 R 1 HETATM 18 C C16 7V7 . . . H 6 96.123 107.105 123.544 1 76.18 ? C16 7V7 501 R 1 HETATM 19 C C18 7V7 . . . H 6 95.35 108.793 125.068 1 76.18 ? C18 7V7 501 R 1 HETATM 20 C C19 7V7 . . . H 6 96.528 108.68 125.782 1 76.18 ? C19 7V7 501 R 1 HETATM 21 C C23 7V7 . . . H 6 102.105 105.934 133.897 1 76.18 ? C23 7V7 501 R 1 HETATM 22 C C25 7V7 . . . H 6 102.82 104.324 132.268 1 76.18 ? C25 7V7 501 R 1 HETATM 23 N N05 7V7 . . . H 6 103.545 105.159 129.944 1 76.18 ? N05 7V7 501 R 1 HETATM 24 N N09 7V7 . . . H 6 100.09 106.058 127.575 1 76.18 ? N09 7V7 501 R 1 HETATM 25 O O01 7V7 . . . H 6 105.457 105.51 128.695 1 76.18 ? O01 7V7 501 R 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 25 #