data_8EFO # _model_server_result.job_id I6LMTJBICHTdEzpY1v1p7A _model_server_result.datetime_utc '2024-10-19 15:36:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8efo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":407}' # _entry.id 8EFO # _exptl.entry_id 8EFO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8EFO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EFO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 I N N ? 7 J N N ? 7 K N N ? 7 L N N ? 7 M N N ? 7 N N N ? 7 P N N ? 7 Q N N ? 7 R N N ? 7 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 141 R CYS 142 1_555 A SG CYS 218 R CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 E SG CYS 160 E CYS 160 1_555 E SG CYS 230 E CYS 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 F SG CYS 141 M CYS 142 1_555 F SG CYS 218 M CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8EFO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 6 8QY R 1 401 500 8QY PZM . I 7 CLR R 1 402 610 CLR CLR . J 7 CLR R 1 403 612 CLR CLR . K 7 CLR R 1 404 613 CLR CLR . L 7 CLR R 1 405 615 CLR CLR . M 7 CLR R 1 406 614 CLR CLR . N 7 CLR R 1 407 615 CLR CLR . O 6 8QY M 1 401 500 8QY PZM . P 7 CLR M 1 402 614 CLR CLR . Q 7 CLR M 1 403 610 CLR CLR . R 7 CLR M 1 404 612 CLR CLR . S 7 CLR M 1 405 613 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . N 7 164.574 144.235 157.466 1 19.46 ? C1 CLR 407 R 1 HETATM 2 C C2 CLR . . . N 7 163.346 143.461 156.976 1 19.46 ? C2 CLR 407 R 1 HETATM 3 C C3 CLR . . . N 7 162.46 143.108 158.167 1 19.46 ? C3 CLR 407 R 1 HETATM 4 C C4 CLR . . . N 7 161.892 144.414 158.721 1 19.46 ? C4 CLR 407 R 1 HETATM 5 C C5 CLR . . . N 7 163.063 145.276 159.158 1 19.46 ? C5 CLR 407 R 1 HETATM 6 C C6 CLR . . . N 7 163.042 145.759 160.366 1 19.46 ? C6 CLR 407 R 1 HETATM 7 C C7 CLR . . . N 7 164.123 146.626 160.943 1 19.46 ? C7 CLR 407 R 1 HETATM 8 C C8 CLR . . . N 7 165.022 147.226 159.854 1 19.46 ? C8 CLR 407 R 1 HETATM 9 C C9 CLR . . . N 7 165.408 146.135 158.846 1 19.46 ? C9 CLR 407 R 1 HETATM 10 C C10 CLR . . . N 7 164.175 145.53 158.186 1 19.46 ? C10 CLR 407 R 1 HETATM 11 C C11 CLR . . . N 7 166.426 146.651 157.822 1 19.46 ? C11 CLR 407 R 1 HETATM 12 C C12 CLR . . . N 7 167.673 147.239 158.506 1 19.46 ? C12 CLR 407 R 1 HETATM 13 C C13 CLR . . . N 7 167.308 148.313 159.54 1 19.46 ? C13 CLR 407 R 1 HETATM 14 C C14 CLR . . . N 7 166.307 147.66 160.542 1 19.46 ? C14 CLR 407 R 1 HETATM 15 C C15 CLR . . . N 7 166.174 148.733 161.622 1 19.46 ? C15 CLR 407 R 1 HETATM 16 C C16 CLR . . . N 7 167.671 149.051 161.859 1 19.46 ? C16 CLR 407 R 1 HETATM 17 C C17 CLR . . . N 7 168.408 148.79 160.512 1 19.46 ? C17 CLR 407 R 1 HETATM 18 C C18 CLR . . . N 7 166.609 149.492 158.842 1 19.46 ? C18 CLR 407 R 1 HETATM 19 C C19 CLR . . . N 7 163.633 146.531 157.159 1 19.46 ? C19 CLR 407 R 1 HETATM 20 C C20 CLR . . . N 7 169.194 150.042 160.058 1 19.46 ? C20 CLR 407 R 1 HETATM 21 C C21 CLR . . . N 7 170.342 149.656 159.127 1 19.46 ? C21 CLR 407 R 1 HETATM 22 C C22 CLR . . . N 7 169.846 150.784 161.23 1 19.46 ? C22 CLR 407 R 1 HETATM 23 C C23 CLR . . . N 7 169.436 152.254 161.191 1 19.46 ? C23 CLR 407 R 1 HETATM 24 C C24 CLR . . . N 7 170.251 153.035 162.22 1 19.46 ? C24 CLR 407 R 1 HETATM 25 C C25 CLR . . . N 7 169.745 154.475 162.23 1 19.46 ? C25 CLR 407 R 1 HETATM 26 C C26 CLR . . . N 7 170.72 155.355 163.009 1 19.46 ? C26 CLR 407 R 1 HETATM 27 C C27 CLR . . . N 7 168.398 154.477 162.95 1 19.46 ? C27 CLR 407 R 1 HETATM 28 O O1 CLR . . . N 7 161.391 142.257 157.746 1 19.46 ? O1 CLR 407 R 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 49 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 28 #