data_8EGD
#
_model_server_result.job_id            '_gbip1Z47sCx3t32GiB2hg' 
_model_server_result.datetime_utc      '2024-11-15 03:54:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8egd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":409}' 
#
_entry.id    8EGD 
#
_exptl.entry_id    8EGD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              176.175 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-(4-methoxyphenyl)-1H-tetrazole 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8EGD 
_cell.length_a            111.96 
_cell.length_b            111.96 
_cell.length_c            137.18 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8EGD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        181 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 167.94 96.960204 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 H N N 
? 6 I N N 
? 6 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 245 A GLU 245 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? 
metalc ? metalc2 A OD1 ASN 249 A ASN 249 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.985 ? 
metalc ? metalc3 A O VAL 298 A VAL 298 1_555 D K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? 
metalc ? metalc4 A O ASP 300 A ASP 300 1_555 D K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.963 ? 
metalc ? metalc5 A O PHE 303 A PHE 303 1_555 D K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? 
metalc ? metalc6 A O GLY 337 A GLY 337 1_555 D K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.111 ? 
metalc ? metalc7 B O1B ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.992 ? 
metalc ? metalc8 B O2A ADP . A ADP 401 1_555 D K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? 
#
_chem_comp.formula           'C8 H8 N4 O' 
_chem_comp.formula_weight    176.175 
_chem_comp.id                WIH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-(4-methoxyphenyl)-1H-tetrazole 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O2 WIH sing 424 n n 
O2 C3 WIH sing 425 n n 
C3 C4 WIH doub 426 n y 
C3 C8 WIH sing 427 n y 
C4 C5 WIH sing 428 n y 
C8 C7 WIH doub 429 n y 
C5 C6 WIH doub 430 n y 
C7 C6 WIH sing 431 n y 
C6 C9 WIH sing 432 n n 
N10 C9 WIH sing 433 n y 
N10 N11 WIH sing 434 n y 
C9 N13 WIH doub 435 n y 
N13 N12 WIH sing 436 n y 
N11 N12 WIH doub 437 n y 
C4 HC4 WIH sing 438 n n 
C7 HC7 WIH sing 439 n n 
C8 HC8 WIH sing 440 n n 
C1 HC1A WIH sing 441 n n 
C1 HC1C WIH sing 442 n n 
C1 HC1B WIH sing 443 n n 
C5 HC5 WIH sing 444 n n 
N10 H1 WIH sing 445 n n 
#
_atom_sites.entry_id                     8EGD 
_atom_sites.fract_transf_matrix[1][1]    0.008932 
_atom_sites.fract_transf_matrix[1][2]    0.005157 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010314 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00729 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ADP A 1 401 401 ADP ADP . 
C 3 MG A 1 402 402 MG MG . 
D 4 K A 1 403 403 K K . 
E 5 SO4 A 1 404 1 SO4 SO4 . 
F 5 SO4 A 1 405 2 SO4 SO4 . 
G 5 SO4 A 1 406 3 SO4 SO4 . 
H 6 WIH A 1 407 4000 WIH PFE . 
I 6 WIH A 1 408 4001 WIH PFE . 
J 6 WIH A 1 409 4002 WIH PFE . 
K 7 HOH A 1 501 19 HOH HOH . 
K 7 HOH A 2 502 40 HOH HOH . 
K 7 HOH A 3 503 5 HOH HOH . 
K 7 HOH A 4 504 22 HOH HOH . 
K 7 HOH A 5 505 10 HOH HOH . 
K 7 HOH A 6 506 15 HOH HOH . 
K 7 HOH A 7 507 16 HOH HOH . 
K 7 HOH A 8 508 13 HOH HOH . 
K 7 HOH A 9 509 14 HOH HOH . 
K 7 HOH A 10 510 25 HOH HOH . 
K 7 HOH A 11 511 26 HOH HOH . 
K 7 HOH A 12 512 23 HOH HOH . 
K 7 HOH A 13 513 30 HOH HOH . 
K 7 HOH A 14 514 36 HOH HOH . 
K 7 HOH A 15 515 20 HOH HOH . 
K 7 HOH A 16 516 4 HOH HOH . 
K 7 HOH A 17 517 17 HOH HOH . 
K 7 HOH A 18 518 9 HOH HOH . 
K 7 HOH A 19 519 6 HOH HOH . 
K 7 HOH A 20 520 21 HOH HOH . 
K 7 HOH A 21 521 44 HOH HOH . 
K 7 HOH A 22 522 29 HOH HOH . 
K 7 HOH A 23 523 39 HOH HOH . 
K 7 HOH A 24 524 48 HOH HOH . 
K 7 HOH A 25 525 11 HOH HOH . 
K 7 HOH A 26 526 24 HOH HOH . 
K 7 HOH A 27 527 47 HOH HOH . 
K 7 HOH A 28 528 34 HOH HOH . 
K 7 HOH A 29 529 28 HOH HOH . 
K 7 HOH A 30 530 43 HOH HOH . 
K 7 HOH A 31 531 49 HOH HOH . 
K 7 HOH A 32 532 1 HOH HOH . 
K 7 HOH A 33 533 2 HOH HOH . 
K 7 HOH A 34 534 12 HOH HOH . 
K 7 HOH A 35 535 32 HOH HOH . 
K 7 HOH A 36 536 45 HOH HOH . 
K 7 HOH A 37 537 31 HOH HOH . 
K 7 HOH A 38 538 18 HOH HOH . 
K 7 HOH A 39 539 3 HOH HOH . 
K 7 HOH A 40 540 7 HOH HOH . 
K 7 HOH A 41 541 33 HOH HOH . 
K 7 HOH A 42 542 42 HOH HOH . 
K 7 HOH A 43 543 8 HOH HOH . 
K 7 HOH A 44 544 27 HOH HOH . 
K 7 HOH A 45 545 37 HOH HOH . 
K 7 HOH A 46 546 46 HOH HOH . 
K 7 HOH A 47 547 41 HOH HOH . 
K 7 HOH A 48 548 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 WIH . . . J 6 93.437 26.558 36.539 1 82.21 ? C4 WIH 409 A 1 
HETATM 2 C C7 WIH . . . J 6 94.319 29.097 37.285 1 82.31 ? C7 WIH 409 A 1 
HETATM 3 C C6 WIH . . . J 6 93.287 28.49 38.01 1 82.36 ? C6 WIH 409 A 1 
HETATM 4 C C9 WIH . . . J 6 92.687 29.156 39.152 1 82.81 ? C9 WIH 409 A 1 
HETATM 5 C C8 WIH . . . J 6 94.908 28.437 36.205 1 82.29 ? C8 WIH 409 A 1 
HETATM 6 C C1 WIH . . . J 6 95.145 25.164 34.753 1 82.21 ? C1 WIH 409 A 1 
HETATM 7 O O2 WIH . . . J 6 95.172 26.586 34.799 1 82.34 ? O2 WIH 409 A 1 
HETATM 8 C C3 WIH . . . J 6 94.491 27.154 35.843 1 82.33 ? C3 WIH 409 A 1 
HETATM 9 C C5 WIH . . . J 6 92.842 27.221 37.617 1 82.14 ? C5 WIH 409 A 1 
HETATM 10 N N10 WIH . . . J 6 93.175 30.267 39.73 1 83.13 ? N10 WIH 409 A 1 
HETATM 11 N N11 WIH . . . J 6 92.273 30.44 40.705 1 83.53 ? N11 WIH 409 A 1 
HETATM 12 N N12 WIH . . . J 6 91.288 29.536 40.767 1 83.53 ? N12 WIH 409 A 1 
HETATM 13 N N13 WIH . . . J 6 91.544 28.699 39.771 1 83.2 ? N13 WIH 409 A 1 
HETATM 14 H HC4 WIH . . . J 6 93.063 25.574 36.273 0 82.21 ? HC4 WIH 409 A 1 
HETATM 15 H HC7 WIH . . . J 6 94.688 30.086 37.546 0 82.31 ? HC7 WIH 409 A 1 
HETATM 16 H HC8 WIH . . . J 6 95.716 28.923 35.663 0 82.29 ? HC8 WIH 409 A 1 
HETATM 17 H HC1A WIH . . . J 6 95.895 24.84 34.024 0 82.21 ? HC1A WIH 409 A 1 
HETATM 18 H HC1C WIH . . . J 6 94.17 24.805 34.408 0 82.21 ? HC1C WIH 409 A 1 
HETATM 19 H HC1B WIH . . . J 6 95.409 24.722 35.72 0 82.21 ? HC1B WIH 409 A 1 
HETATM 20 H HC5 WIH . . . J 6 92.036 26.72 38.148 0 82.14 ? HC5 WIH 409 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           263 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           20 
#