data_8EGF # _model_server_result.job_id Qw-ghyLbUfNQr-U8EWV3qQ _model_server_result.datetime_utc '2025-06-29 10:05:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8egf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":406}' # _entry.id 8EGF # _exptl.entry_id 8EGF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 236.272 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "(5P)-5-(4'-methyl[1,1'-biphenyl]-2-yl)-1H-tetrazole" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8EGF _cell.length_a 111.401 _cell.length_b 111.401 _cell.length_c 140.547 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EGF _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 167.1015 96.476096 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O VAL 298 A VAL 298 1_555 C K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? metalc ? metalc2 A O ASP 300 A ASP 300 1_555 C K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.863 ? metalc ? metalc3 A O PHE 303 A PHE 303 1_555 C K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? metalc ? metalc4 A O GLY 337 A GLY 337 1_555 C K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc5 B O2A ADP . A ADP 401 1_555 C K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? # _chem_comp.formula 'C14 H12 N4' _chem_comp.formula_weight 236.272 _chem_comp.id WIK _chem_comp.mon_nstd_flag . _chem_comp.name "(5P)-5-(4'-methyl[1,1'-biphenyl]-2-yl)-1H-tetrazole" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C11 WIK doub 424 n y C10 C9 WIK sing 425 n y C11 C12 WIK sing 426 n y C9 C8 WIK doub 427 n y C12 C13 WIK doub 428 n y C8 C13 WIK sing 429 n y C8 C5 WIK sing 430 n n C4 C5 WIK doub 431 n y C4 C3 WIK sing 432 n y C13 C14 WIK sing 433 n n C5 C6 WIK sing 434 n y C3 C2 WIK doub 435 n y C6 C7 WIK doub 436 n y C2 C7 WIK sing 437 n y C2 C1 WIK sing 438 n n C14 N18 WIK doub 439 n y C14 N15 WIK sing 440 n y N18 N17 WIK sing 441 n y N15 N16 WIK sing 442 n y N17 N16 WIK doub 443 n y C4 HC4 WIK sing 444 n n C7 HC7 WIK sing 445 n n C6 HC6 WIK sing 446 n n C9 HC9 WIK sing 447 n n C1 HC1A WIK sing 448 n n C1 HC1C WIK sing 449 n n C1 HC1B WIK sing 450 n n C3 HC3 WIK sing 451 n n C10 HC10 WIK sing 452 n n C11 HC11 WIK sing 453 n n C12 HC12 WIK sing 454 n n N15 HN15 WIK sing 455 n n # _atom_sites.entry_id 8EGF _atom_sites.fract_transf_matrix[1][1] 0.008977 _atom_sites.fract_transf_matrix[1][2] 0.005183 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010365 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007115 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 401 401 ADP ADP . C 3 K A 1 402 403 K K . D 4 SO4 A 1 403 404 SO4 SO4 . E 4 SO4 A 1 404 405 SO4 SO4 . F 5 WIK A 1 405 4000 WIK PFE . G 5 WIK A 1 406 4001 WIK PFE . H 4 SO4 A 1 407 1 SO4 SO4 . I 6 HOH A 1 501 16 HOH HOH . I 6 HOH A 2 502 23 HOH HOH . I 6 HOH A 3 503 35 HOH HOH . I 6 HOH A 4 504 43 HOH HOH . I 6 HOH A 5 505 77 HOH HOH . I 6 HOH A 6 506 33 HOH HOH . I 6 HOH A 7 507 37 HOH HOH . I 6 HOH A 8 508 70 HOH HOH . I 6 HOH A 9 509 67 HOH HOH . I 6 HOH A 10 510 74 HOH HOH . I 6 HOH A 11 511 9 HOH HOH . I 6 HOH A 12 512 72 HOH HOH . I 6 HOH A 13 513 20 HOH HOH . I 6 HOH A 14 514 65 HOH HOH . I 6 HOH A 15 515 78 HOH HOH . I 6 HOH A 16 516 60 HOH HOH . I 6 HOH A 17 517 27 HOH HOH . I 6 HOH A 18 518 69 HOH HOH . I 6 HOH A 19 519 14 HOH HOH . I 6 HOH A 20 520 44 HOH HOH . I 6 HOH A 21 521 45 HOH HOH . I 6 HOH A 22 522 1 HOH HOH . I 6 HOH A 23 523 17 HOH HOH . I 6 HOH A 24 524 28 HOH HOH . I 6 HOH A 25 525 32 HOH HOH . I 6 HOH A 26 526 62 HOH HOH . I 6 HOH A 27 527 64 HOH HOH . I 6 HOH A 28 528 88 HOH HOH . I 6 HOH A 29 529 90 HOH HOH . I 6 HOH A 30 530 83 HOH HOH . I 6 HOH A 31 531 11 HOH HOH . I 6 HOH A 32 532 4 HOH HOH . I 6 HOH A 33 533 36 HOH HOH . I 6 HOH A 34 534 48 HOH HOH . I 6 HOH A 35 535 18 HOH HOH . I 6 HOH A 36 536 29 HOH HOH . I 6 HOH A 37 537 61 HOH HOH . I 6 HOH A 38 538 73 HOH HOH . I 6 HOH A 39 539 79 HOH HOH . I 6 HOH A 40 540 26 HOH HOH . I 6 HOH A 41 541 10 HOH HOH . I 6 HOH A 42 542 80 HOH HOH . I 6 HOH A 43 543 12 HOH HOH . I 6 HOH A 44 544 66 HOH HOH . I 6 HOH A 45 545 57 HOH HOH . I 6 HOH A 46 546 5 HOH HOH . I 6 HOH A 47 547 56 HOH HOH . I 6 HOH A 48 548 58 HOH HOH . I 6 HOH A 49 549 87 HOH HOH . I 6 HOH A 50 550 25 HOH HOH . I 6 HOH A 51 551 2 HOH HOH . I 6 HOH A 52 552 13 HOH HOH . I 6 HOH A 53 553 21 HOH HOH . I 6 HOH A 54 554 39 HOH HOH . I 6 HOH A 55 555 24 HOH HOH . I 6 HOH A 56 556 19 HOH HOH . I 6 HOH A 57 557 86 HOH HOH . I 6 HOH A 58 558 49 HOH HOH . I 6 HOH A 59 559 55 HOH HOH . I 6 HOH A 60 560 6 HOH HOH . I 6 HOH A 61 561 38 HOH HOH . I 6 HOH A 62 562 89 HOH HOH . I 6 HOH A 63 563 54 HOH HOH . I 6 HOH A 64 564 47 HOH HOH . I 6 HOH A 65 565 30 HOH HOH . I 6 HOH A 66 566 15 HOH HOH . I 6 HOH A 67 567 46 HOH HOH . I 6 HOH A 68 568 52 HOH HOH . I 6 HOH A 69 569 42 HOH HOH . I 6 HOH A 70 570 71 HOH HOH . I 6 HOH A 71 571 51 HOH HOH . I 6 HOH A 72 572 41 HOH HOH . I 6 HOH A 73 573 81 HOH HOH . I 6 HOH A 74 574 68 HOH HOH . I 6 HOH A 75 575 3 HOH HOH . I 6 HOH A 76 576 8 HOH HOH . I 6 HOH A 77 577 76 HOH HOH . I 6 HOH A 78 578 7 HOH HOH . I 6 HOH A 79 579 84 HOH HOH . I 6 HOH A 80 580 22 HOH HOH . I 6 HOH A 81 581 40 HOH HOH . I 6 HOH A 82 582 63 HOH HOH . I 6 HOH A 83 583 75 HOH HOH . I 6 HOH A 84 584 50 HOH HOH . I 6 HOH A 85 585 34 HOH HOH . I 6 HOH A 86 586 82 HOH HOH . I 6 HOH A 87 587 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 WIK . . . G 5 108.887 31.047 26.125 1 62.75 ? C4 WIK 406 A 1 HETATM 2 C C7 WIK . . . G 5 110.315 28.942 27.191 1 65.59 ? C7 WIK 406 A 1 HETATM 3 C C6 WIK . . . G 5 110.091 29.006 25.824 1 63.92 ? C6 WIK 406 A 1 HETATM 4 C C9 WIK . . . G 5 110.135 29.979 22.903 1 64.27 ? C9 WIK 406 A 1 HETATM 5 C C13 WIK . . . G 5 107.765 30.236 23.272 1 60.8 ? C13 WIK 406 A 1 HETATM 6 C C8 WIK . . . G 5 109.068 30.096 23.798 1 62.79 ? C8 WIK 406 A 1 HETATM 7 C C1 WIK . . . G 5 110.023 29.815 29.543 1 64.25 ? C1 WIK 406 A 1 HETATM 8 C C2 WIK . . . G 5 109.81 29.91 28.052 1 65.15 ? C2 WIK 406 A 1 HETATM 9 C C3 WIK . . . G 5 109.096 30.963 27.495 1 62.71 ? C3 WIK 406 A 1 HETATM 10 C C5 WIK . . . G 5 109.364 30.058 25.26 1 63.1 ? C5 WIK 406 A 1 HETATM 11 C C10 WIK . . . G 5 109.924 30.013 21.532 1 64.93 ? C10 WIK 406 A 1 HETATM 12 C C11 WIK . . . G 5 108.645 30.155 21.027 1 63.31 ? C11 WIK 406 A 1 HETATM 13 C C12 WIK . . . G 5 107.564 30.265 21.888 1 61.05 ? C12 WIK 406 A 1 HETATM 14 C C14 WIK . . . G 5 106.574 30.34 24.133 1 57.43 ? C14 WIK 406 A 1 HETATM 15 N N15 WIK . . . G 5 105.687 31.338 24.101 1 54.05 ? N15 WIK 406 A 1 HETATM 16 N N16 WIK . . . G 5 104.752 31.123 25.051 1 55.55 ? N16 WIK 406 A 1 HETATM 17 N N17 WIK . . . G 5 105.076 30.013 25.633 1 54.86 ? N17 WIK 406 A 1 HETATM 18 N N18 WIK . . . G 5 106.206 29.495 25.085 1 56.2 ? N18 WIK 406 A 1 HETATM 19 H HC4 WIK . . . G 5 108.361 31.907 25.712 0 61.97 ? HC4 WIK 406 A 1 HETATM 20 H HC7 WIK . . . G 5 110.896 28.116 27.598 0 66.74 ? HC7 WIK 406 A 1 HETATM 21 H HC6 WIK . . . G 5 110.467 28.216 25.177 0 65.07 ? HC6 WIK 406 A 1 HETATM 22 H HC9 WIK . . . G 5 111.146 29.854 23.287 0 65.49 ? HC9 WIK 406 A 1 HETATM 23 H HC1A WIK . . . G 5 109.152 30.182 30.083 0 63.17 ? HC1A WIK 406 A 1 HETATM 24 H HC1C WIK . . . G 5 110.195 28.792 29.873 0 64.96 ? HC1C WIK 406 A 1 HETATM 25 H HC1B WIK . . . G 5 110.884 30.404 29.857 0 64.94 ? HC1B WIK 406 A 1 HETATM 26 H HC3 WIK . . . G 5 108.685 31.747 28.129 0 61.95 ? HC3 WIK 406 A 1 HETATM 27 H HC10 WIK . . . G 5 110.774 29.927 20.856 0 66.25 ? HC10 WIK 406 A 1 HETATM 28 H HC11 WIK . . . G 5 108.483 30.18 19.95 0 63.5 ? HC11 WIK 406 A 1 HETATM 29 H HC12 WIK . . . G 5 106.569 30.372 21.459 0 60.23 ? HC12 WIK 406 A 1 HETATM 30 H HN15 WIK . . . G 5 105.644 32.157 23.503 0 53.91 ? HN15 WIK 406 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 61 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #