data_8EHO
#
_model_server_result.job_id            nGz6JlrSDOOqZ8LnmxOkNw 
_model_server_result.datetime_utc      '2024-11-22 22:51:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8eho 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":602}' 
#
_entry.id    8EHO 
#
_exptl.entry_id    8EHO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8EHO 
_cell.length_a            91.686 
_cell.length_b            159.492 
_cell.length_c            147.325 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8EHO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
? dimeric 2 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H,I,J,K,U,V 1 1 
C,D,L,M,N,O,P,W,X 2 1 
E,F,Q,R,S,T,Y,Z 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 I N N 
? 4 M N N 
? 4 N N N 
? 4 P N N 
? 4 R N N 
? 4 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 45 A CYS 429 1_555 J CA 3CN . B 3CN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.777 ? 
covale ? covale2 B C GLY 75 B GLY 75 1_555 J ND 3CN . B 3CN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
covale ? covale3 C SG CYS 45 C CYS 429 1_555 O CA 3CN . D 3CN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.774 ? 
covale ? covale4 D C GLY 75 D GLY 75 1_555 O ND 3CN . D 3CN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
covale ? covale5 E SG CYS 45 E CYS 429 1_555 T CA 3CN . F 3CN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.774 ? 
covale ? covale6 F C GLY 75 F GLY 75 1_555 T ND 3CN . F 3CN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? 
metalc ? metalc1 A SG CYS 101 A CYS 485 1_555 G ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc2 A SG CYS 132 A CYS 516 1_555 G ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc3 A SG CYS 137 A CYS 521 1_555 G ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc4 A SG CYS 141 A CYS 525 1_555 G ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc5 C SG CYS 101 C CYS 485 1_555 L ZN ZN . C ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc6 C SG CYS 132 C CYS 516 1_555 L ZN ZN . C ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc7 C SG CYS 137 C CYS 521 1_555 L ZN ZN . C ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc8 C SG CYS 141 C CYS 525 1_555 L ZN ZN . C ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc9 E SG CYS 101 E CYS 485 1_555 Q ZN ZN . E ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc10 E SG CYS 132 E CYS 516 1_555 Q ZN ZN . E ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc11 E SG CYS 137 E CYS 521 1_555 Q ZN ZN . E ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc12 E SG CYS 141 E CYS 525 1_555 Q ZN ZN . E ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 141 n n 
C1 C2 GOL sing 142 n n 
C1 H11 GOL sing 143 n n 
C1 H12 GOL sing 144 n n 
O1 HO1 GOL sing 145 n n 
C2 O2 GOL sing 146 n n 
C2 C3 GOL sing 147 n n 
C2 H2 GOL sing 148 n n 
O2 HO2 GOL sing 149 n n 
C3 O3 GOL sing 150 n n 
C3 H31 GOL sing 151 n n 
C3 H32 GOL sing 152 n n 
O3 HO3 GOL sing 153 n n 
#
_atom_sites.entry_id                     8EHO 
_atom_sites.fract_transf_matrix[1][1]    0.010907 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00627 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006788 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 ZN A 1 601 1 ZN ZN . 
H 4 GOL A 1 602 4 GOL GOL . 
I 4 GOL A 1 603 5 GOL GOL . 
J 5 3CN B 1 101 76 3CN 3CN . 
K 6 NO3 B 1 102 101 NO3 NO3 . 
L 3 ZN C 1 601 2 ZN ZN . 
M 4 GOL C 1 602 2 GOL GOL . 
N 4 GOL C 1 603 3 GOL GOL . 
O 5 3CN D 1 101 76 3CN 3CN . 
P 4 GOL D 1 102 7 GOL GOL . 
Q 3 ZN E 1 601 3 ZN ZN . 
R 4 GOL E 1 602 1 GOL GOL . 
S 4 GOL E 1 603 6 GOL GOL . 
T 5 3CN F 1 101 76 3CN 3CN . 
U 7 HOH A 1 701 101 HOH HOH . 
U 7 HOH A 2 702 9 HOH HOH . 
U 7 HOH A 3 703 165 HOH HOH . 
U 7 HOH A 4 704 168 HOH HOH . 
U 7 HOH A 5 705 32 HOH HOH . 
U 7 HOH A 6 706 123 HOH HOH . 
U 7 HOH A 7 707 4 HOH HOH . 
U 7 HOH A 8 708 191 HOH HOH . 
U 7 HOH A 9 709 135 HOH HOH . 
U 7 HOH A 10 710 20 HOH HOH . 
U 7 HOH A 11 711 26 HOH HOH . 
U 7 HOH A 12 712 169 HOH HOH . 
U 7 HOH A 13 713 124 HOH HOH . 
U 7 HOH A 14 714 102 HOH HOH . 
U 7 HOH A 15 715 133 HOH HOH . 
U 7 HOH A 16 716 5 HOH HOH . 
U 7 HOH A 17 717 125 HOH HOH . 
U 7 HOH A 18 718 152 HOH HOH . 
U 7 HOH A 19 719 170 HOH HOH . 
U 7 HOH A 20 720 181 HOH HOH . 
U 7 HOH A 21 721 190 HOH HOH . 
U 7 HOH A 22 722 40 HOH HOH . 
U 7 HOH A 23 723 41 HOH HOH . 
U 7 HOH A 24 724 106 HOH HOH . 
U 7 HOH A 25 725 37 HOH HOH . 
U 7 HOH A 26 726 47 HOH HOH . 
U 7 HOH A 27 727 83 HOH HOH . 
U 7 HOH A 28 728 163 HOH HOH . 
U 7 HOH A 29 729 164 HOH HOH . 
U 7 HOH A 30 730 48 HOH HOH . 
U 7 HOH A 31 731 43 HOH HOH . 
U 7 HOH A 32 732 182 HOH HOH . 
U 7 HOH A 33 733 87 HOH HOH . 
U 7 HOH A 34 734 189 HOH HOH . 
V 7 HOH B 1 201 81 HOH HOH . 
V 7 HOH B 2 202 105 HOH HOH . 
V 7 HOH B 3 203 82 HOH HOH . 
V 7 HOH B 4 204 18 HOH HOH . 
V 7 HOH B 5 205 72 HOH HOH . 
V 7 HOH B 6 206 107 HOH HOH . 
V 7 HOH B 7 207 127 HOH HOH . 
V 7 HOH B 8 208 122 HOH HOH . 
V 7 HOH B 9 209 8 HOH HOH . 
V 7 HOH B 10 210 157 HOH HOH . 
V 7 HOH B 11 211 158 HOH HOH . 
V 7 HOH B 12 212 38 HOH HOH . 
V 7 HOH B 13 213 39 HOH HOH . 
V 7 HOH B 14 214 187 HOH HOH . 
V 7 HOH B 15 215 56 HOH HOH . 
V 7 HOH B 16 216 1 HOH HOH . 
V 7 HOH B 17 217 161 HOH HOH . 
V 7 HOH B 18 218 188 HOH HOH . 
V 7 HOH B 19 219 126 HOH HOH . 
V 7 HOH B 20 220 156 HOH HOH . 
V 7 HOH B 21 221 160 HOH HOH . 
W 7 HOH C 1 701 94 HOH HOH . 
W 7 HOH C 2 702 151 HOH HOH . 
W 7 HOH C 3 703 22 HOH HOH . 
W 7 HOH C 4 704 24 HOH HOH . 
W 7 HOH C 5 705 13 HOH HOH . 
W 7 HOH C 6 706 179 HOH HOH . 
W 7 HOH C 7 707 136 HOH HOH . 
W 7 HOH C 8 708 134 HOH HOH . 
W 7 HOH C 9 709 7 HOH HOH . 
W 7 HOH C 10 710 31 HOH HOH . 
W 7 HOH C 11 711 16 HOH HOH . 
W 7 HOH C 12 712 65 HOH HOH . 
W 7 HOH C 13 713 173 HOH HOH . 
W 7 HOH C 14 714 146 HOH HOH . 
W 7 HOH C 15 715 95 HOH HOH . 
W 7 HOH C 16 716 149 HOH HOH . 
W 7 HOH C 17 717 59 HOH HOH . 
W 7 HOH C 18 718 137 HOH HOH . 
W 7 HOH C 19 719 85 HOH HOH . 
W 7 HOH C 20 720 91 HOH HOH . 
W 7 HOH C 21 721 89 HOH HOH . 
W 7 HOH C 22 722 25 HOH HOH . 
W 7 HOH C 23 723 80 HOH HOH . 
W 7 HOH C 24 724 96 HOH HOH . 
W 7 HOH C 25 725 46 HOH HOH . 
W 7 HOH C 26 726 66 HOH HOH . 
W 7 HOH C 27 727 147 HOH HOH . 
W 7 HOH C 28 728 64 HOH HOH . 
W 7 HOH C 29 729 92 HOH HOH . 
W 7 HOH C 30 730 67 HOH HOH . 
W 7 HOH C 31 731 73 HOH HOH . 
W 7 HOH C 32 732 154 HOH HOH . 
W 7 HOH C 33 733 153 HOH HOH . 
W 7 HOH C 34 734 162 HOH HOH . 
W 7 HOH C 35 735 90 HOH HOH . 
W 7 HOH C 36 736 84 HOH HOH . 
W 7 HOH C 37 737 36 HOH HOH . 
W 7 HOH C 38 738 167 HOH HOH . 
W 7 HOH C 39 739 86 HOH HOH . 
X 7 HOH D 1 201 110 HOH HOH . 
X 7 HOH D 2 202 155 HOH HOH . 
X 7 HOH D 3 203 166 HOH HOH . 
X 7 HOH D 4 204 75 HOH HOH . 
X 7 HOH D 5 205 76 HOH HOH . 
X 7 HOH D 6 206 23 HOH HOH . 
X 7 HOH D 7 207 10 HOH HOH . 
X 7 HOH D 8 208 77 HOH HOH . 
X 7 HOH D 9 209 108 HOH HOH . 
X 7 HOH D 10 210 148 HOH HOH . 
X 7 HOH D 11 211 79 HOH HOH . 
X 7 HOH D 12 212 28 HOH HOH . 
X 7 HOH D 13 213 176 HOH HOH . 
X 7 HOH D 14 214 120 HOH HOH . 
X 7 HOH D 15 215 132 HOH HOH . 
X 7 HOH D 16 216 177 HOH HOH . 
X 7 HOH D 17 217 78 HOH HOH . 
X 7 HOH D 18 218 119 HOH HOH . 
X 7 HOH D 19 219 178 HOH HOH . 
Y 7 HOH E 1 701 150 HOH HOH . 
Y 7 HOH E 2 702 185 HOH HOH . 
Y 7 HOH E 3 703 29 HOH HOH . 
Y 7 HOH E 4 704 131 HOH HOH . 
Y 7 HOH E 5 705 139 HOH HOH . 
Y 7 HOH E 6 706 174 HOH HOH . 
Y 7 HOH E 7 707 138 HOH HOH . 
Y 7 HOH E 8 708 104 HOH HOH . 
Y 7 HOH E 9 709 140 HOH HOH . 
Y 7 HOH E 10 710 145 HOH HOH . 
Y 7 HOH E 11 711 14 HOH HOH . 
Y 7 HOH E 12 712 52 HOH HOH . 
Y 7 HOH E 13 713 88 HOH HOH . 
Y 7 HOH E 14 714 61 HOH HOH . 
Y 7 HOH E 15 715 142 HOH HOH . 
Y 7 HOH E 16 716 53 HOH HOH . 
Y 7 HOH E 17 717 34 HOH HOH . 
Y 7 HOH E 18 718 63 HOH HOH . 
Y 7 HOH E 19 719 35 HOH HOH . 
Y 7 HOH E 20 720 97 HOH HOH . 
Y 7 HOH E 21 721 71 HOH HOH . 
Y 7 HOH E 22 722 54 HOH HOH . 
Y 7 HOH E 23 723 27 HOH HOH . 
Y 7 HOH E 24 724 129 HOH HOH . 
Y 7 HOH E 25 725 19 HOH HOH . 
Y 7 HOH E 26 726 111 HOH HOH . 
Y 7 HOH E 27 727 57 HOH HOH . 
Y 7 HOH E 28 728 130 HOH HOH . 
Y 7 HOH E 29 729 141 HOH HOH . 
Y 7 HOH E 30 730 3 HOH HOH . 
Y 7 HOH E 31 731 186 HOH HOH . 
Y 7 HOH E 32 732 49 HOH HOH . 
Y 7 HOH E 33 733 117 HOH HOH . 
Y 7 HOH E 34 734 112 HOH HOH . 
Y 7 HOH E 35 735 118 HOH HOH . 
Y 7 HOH E 36 736 68 HOH HOH . 
Y 7 HOH E 37 737 172 HOH HOH . 
Y 7 HOH E 38 738 60 HOH HOH . 
Y 7 HOH E 39 739 50 HOH HOH . 
Y 7 HOH E 40 740 183 HOH HOH . 
Y 7 HOH E 41 741 113 HOH HOH . 
Y 7 HOH E 42 742 184 HOH HOH . 
Z 7 HOH F 1 201 17 HOH HOH . 
Z 7 HOH F 2 202 180 HOH HOH . 
Z 7 HOH F 3 203 30 HOH HOH . 
Z 7 HOH F 4 204 143 HOH HOH . 
Z 7 HOH F 5 205 11 HOH HOH . 
Z 7 HOH F 6 206 21 HOH HOH . 
Z 7 HOH F 7 207 144 HOH HOH . 
Z 7 HOH F 8 208 99 HOH HOH . 
Z 7 HOH F 9 209 69 HOH HOH . 
Z 7 HOH F 10 210 51 HOH HOH . 
Z 7 HOH F 11 211 121 HOH HOH . 
Z 7 HOH F 12 212 116 HOH HOH . 
Z 7 HOH F 13 213 128 HOH HOH . 
Z 7 HOH F 14 214 115 HOH HOH . 
Z 7 HOH F 15 215 114 HOH HOH . 
Z 7 HOH F 16 216 98 HOH HOH . 
Z 7 HOH F 17 217 171 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 4 8.798 7.129 15.914 1 59.35 ? C1 GOL 602 A 1 
HETATM 2 O O1 GOL . . . H 4 8.008 7.261 14.734 1 59.72 ? O1 GOL 602 A 1 
HETATM 3 C C2 GOL . . . H 4 8.304 6.023 16.827 1 58.64 ? C2 GOL 602 A 1 
HETATM 4 O O2 GOL . . . H 4 8.891 6.197 18.114 1 59.64 ? O2 GOL 602 A 1 
HETATM 5 C C3 GOL . . . H 4 6.798 5.962 16.973 1 57.42 ? C3 GOL 602 A 1 
HETATM 6 O O3 GOL . . . H 4 6.405 5.394 18.221 1 55.79 ? O3 GOL 602 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#