data_8EHP
#
_model_server_result.job_id            MtJXu6r62vV1Fl3HghsPyA 
_model_server_result.datetime_utc      '2024-11-24 01:37:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ehp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":902}' 
#
_entry.id    8EHP 
#
_exptl.entry_id    8EHP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8EHP 
_cell.length_a            135.516 
_cell.length_b            178.431 
_cell.length_c            180.561 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8EHP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,R 1 1 
B,J,K,L,M,N,O,P,Q,S 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 656 A CYS 654 1_555 A SG CYS 670 A CYS 668 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 B SG CYS 656 B CYS 654 1_555 B SG CYS 670 B CYS 668 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
covale ? covale1 A ND2 ASN 47 A ASN 45 1_555 D C1 NAG . A NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.477 ? 
covale ? covale2 B ND2 ASN 47 B ASN 45 1_555 K C1 NAG . B NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 282 n n 
C1 O1 NAG sing 283 n n 
C1 O5 NAG sing 284 n n 
C1 H1 NAG sing 285 n n 
C2 C3 NAG sing 286 n n 
C2 N2 NAG sing 287 n n 
C2 H2 NAG sing 288 n n 
C3 C4 NAG sing 289 n n 
C3 O3 NAG sing 290 n n 
C3 H3 NAG sing 291 n n 
C4 C5 NAG sing 292 n n 
C4 O4 NAG sing 293 n n 
C4 H4 NAG sing 294 n n 
C5 C6 NAG sing 295 n n 
C5 O5 NAG sing 296 n n 
C5 H5 NAG sing 297 n n 
C6 O6 NAG sing 298 n n 
C6 H61 NAG sing 299 n n 
C6 H62 NAG sing 300 n n 
C7 C8 NAG sing 301 n n 
C7 N2 NAG sing 302 n n 
C7 O7 NAG doub 303 n n 
C8 H81 NAG sing 304 n n 
C8 H82 NAG sing 305 n n 
C8 H83 NAG sing 306 n n 
N2 HN2 NAG sing 307 n n 
O1 HO1 NAG sing 308 n n 
O3 HO3 NAG sing 309 n n 
O4 HO4 NAG sing 310 n n 
O6 HO6 NAG sing 311 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     8EHP 
_atom_sites.fract_transf_matrix[1][1]    0.007379 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005604 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005538 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 WJO A 1 901 901 WJO LIG . 
D 3 NAG A 1 902 1001 NAG NAG . 
E 4 SO4 A 1 903 1 SO4 SO4 . 
F 4 SO4 A 1 904 2 SO4 SO4 . 
G 4 SO4 A 1 905 3 SO4 SO4 . 
H 4 SO4 A 1 906 4 SO4 SO4 . 
I 4 SO4 A 1 907 5 SO4 SO4 . 
J 2 WJO B 1 901 901 WJO LIG . 
K 3 NAG B 1 902 1001 NAG NAG . 
L 5 BTB B 1 903 1101 BTB BTB . 
M 6 GOL B 1 904 1201 GOL GOL . 
N 4 SO4 B 1 905 6 SO4 SO4 . 
O 4 SO4 B 1 906 7 SO4 SO4 . 
P 4 SO4 B 1 907 8 SO4 SO4 . 
Q 4 SO4 B 1 908 9 SO4 SO4 . 
R 7 HOH A 1 1001 57 HOH HOH . 
R 7 HOH A 2 1002 61 HOH HOH . 
R 7 HOH A 3 1003 6 HOH HOH . 
R 7 HOH A 4 1004 14 HOH HOH . 
R 7 HOH A 5 1005 28 HOH HOH . 
R 7 HOH A 6 1006 34 HOH HOH . 
R 7 HOH A 7 1007 3 HOH HOH . 
R 7 HOH A 8 1008 25 HOH HOH . 
R 7 HOH A 9 1009 52 HOH HOH . 
R 7 HOH A 10 1010 16 HOH HOH . 
R 7 HOH A 11 1011 51 HOH HOH . 
R 7 HOH A 12 1012 35 HOH HOH . 
R 7 HOH A 13 1013 31 HOH HOH . 
R 7 HOH A 14 1014 8 HOH HOH . 
R 7 HOH A 15 1015 2 HOH HOH . 
R 7 HOH A 16 1016 46 HOH HOH . 
R 7 HOH A 17 1017 42 HOH HOH . 
R 7 HOH A 18 1018 53 HOH HOH . 
R 7 HOH A 19 1019 4 HOH HOH . 
R 7 HOH A 20 1020 41 HOH HOH . 
R 7 HOH A 21 1021 11 HOH HOH . 
R 7 HOH A 22 1022 19 HOH HOH . 
R 7 HOH A 23 1023 54 HOH HOH . 
R 7 HOH A 24 1024 39 HOH HOH . 
R 7 HOH A 25 1025 1 HOH HOH . 
S 7 HOH B 1 1001 45 HOH HOH . 
S 7 HOH B 2 1002 26 HOH HOH . 
S 7 HOH B 3 1003 32 HOH HOH . 
S 7 HOH B 4 1004 36 HOH HOH . 
S 7 HOH B 5 1005 7 HOH HOH . 
S 7 HOH B 6 1006 9 HOH HOH . 
S 7 HOH B 7 1007 48 HOH HOH . 
S 7 HOH B 8 1008 49 HOH HOH . 
S 7 HOH B 9 1009 58 HOH HOH . 
S 7 HOH B 10 1010 22 HOH HOH . 
S 7 HOH B 11 1011 12 HOH HOH . 
S 7 HOH B 12 1012 20 HOH HOH . 
S 7 HOH B 13 1013 17 HOH HOH . 
S 7 HOH B 14 1014 27 HOH HOH . 
S 7 HOH B 15 1015 47 HOH HOH . 
S 7 HOH B 16 1016 13 HOH HOH . 
S 7 HOH B 17 1017 21 HOH HOH . 
S 7 HOH B 18 1018 44 HOH HOH . 
S 7 HOH B 19 1019 56 HOH HOH . 
S 7 HOH B 20 1020 18 HOH HOH . 
S 7 HOH B 21 1021 43 HOH HOH . 
S 7 HOH B 22 1022 33 HOH HOH . 
S 7 HOH B 23 1023 23 HOH HOH . 
S 7 HOH B 24 1024 55 HOH HOH . 
S 7 HOH B 25 1025 38 HOH HOH . 
S 7 HOH B 26 1026 29 HOH HOH . 
S 7 HOH B 27 1027 37 HOH HOH . 
S 7 HOH B 28 1028 5 HOH HOH . 
S 7 HOH B 29 1029 24 HOH HOH . 
S 7 HOH B 30 1030 50 HOH HOH . 
S 7 HOH B 31 1031 30 HOH HOH . 
S 7 HOH B 32 1032 59 HOH HOH . 
S 7 HOH B 33 1033 10 HOH HOH . 
S 7 HOH B 34 1034 60 HOH HOH . 
S 7 HOH B 35 1035 15 HOH HOH . 
S 7 HOH B 36 1036 40 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . D 3 -15.79 -9.144 -58.154 1 119.71 ? C1 NAG 902 A 1 
HETATM 2 C C2 NAG . . . D 3 -15.719 -10.655 -57.772 1 124.78 ? C2 NAG 902 A 1 
HETATM 3 C C3 NAG . . . D 3 -15.843 -10.894 -56.239 1 123.84 ? C3 NAG 902 A 1 
HETATM 4 C C4 NAG . . . D 3 -15.178 -9.867 -55.301 1 117.38 ? C4 NAG 902 A 1 
HETATM 5 C C5 NAG . . . D 3 -15.309 -8.435 -55.843 1 123.24 ? C5 NAG 902 A 1 
HETATM 6 C C6 NAG . . . D 3 -14.392 -7.459 -55.099 1 128.32 ? C6 NAG 902 A 1 
HETATM 7 C C7 NAG . . . D 3 -16.707 -12.689 -58.953 1 103.03 ? C7 NAG 902 A 1 
HETATM 8 C C8 NAG . . . D 3 -15.923 -13.813 -58.311 1 94.09 ? C8 NAG 902 A 1 
HETATM 9 N N2 NAG . . . D 3 -16.775 -11.459 -58.399 1 114.28 ? N2 NAG 902 A 1 
HETATM 10 O O3 NAG . . . D 3 -15.338 -12.198 -55.897 1 124.84 ? O3 NAG 902 A 1 
HETATM 11 O O4 NAG . . . D 3 -15.72 -9.978 -53.965 1 85.7 ? O4 NAG 902 A 1 
HETATM 12 O O5 NAG . . . D 3 -14.971 -8.397 -57.235 1 123.07 ? O5 NAG 902 A 1 
HETATM 13 O O6 NAG . . . D 3 -13.108 -7.358 -55.747 1 129.47 ? O6 NAG 902 A 1 
HETATM 14 O O7 NAG . . . D 3 -17.319 -12.892 -59.982 1 89.15 ? O7 NAG 902 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           252 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#