data_8EHP # _model_server_result.job_id GTYPWvD2wZ0pO2ZHjaojEA _model_server_result.datetime_utc '2024-11-24 01:17:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ehp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":903}' # _entry.id 8EHP # _exptl.entry_id 8EHP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.24 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8EHP _cell.length_a 135.516 _cell.length_b 178.431 _cell.length_c 180.561 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EHP _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,R 1 1 B,J,K,L,M,N,O,P,Q,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 656 A CYS 654 1_555 A SG CYS 670 A CYS 668 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 656 B CYS 654 1_555 B SG CYS 670 B CYS 668 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? covale ? covale1 A ND2 ASN 47 A ASN 45 1_555 D C1 NAG . A NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.477 ? covale ? covale2 B ND2 ASN 47 B ASN 45 1_555 K C1 NAG . B NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? # _chem_comp.formula 'C8 H19 N O5' _chem_comp.formula_weight 209.24 _chem_comp.id BTB _chem_comp.mon_nstd_flag . _chem_comp.name 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'BIS-TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BTB sing 70 n n C1 C2 BTB sing 71 n n C1 H11 BTB sing 72 n n C1 H12 BTB sing 73 n n O1 HO1 BTB sing 74 n n C2 C3 BTB sing 75 n n C2 C4 BTB sing 76 n n C2 N BTB sing 77 n n C3 O3 BTB sing 78 n n C3 H31 BTB sing 79 n n C3 H32 BTB sing 80 n n O3 HO3 BTB sing 81 n n C4 O4 BTB sing 82 n n C4 H41 BTB sing 83 n n C4 H42 BTB sing 84 n n O4 HO4 BTB sing 85 n n N C5 BTB sing 86 n n N C7 BTB sing 87 n n C5 C6 BTB sing 88 n n C5 H51 BTB sing 89 n n C5 H52 BTB sing 90 n n C6 O6 BTB sing 91 n n C6 H61 BTB sing 92 n n C6 H62 BTB sing 93 n n O6 HO6 BTB sing 94 n n C7 C8 BTB sing 95 n n C7 H71 BTB sing 96 n n C7 H72 BTB sing 97 n n C8 O8 BTB sing 98 n n C8 H81 BTB sing 99 n n C8 H82 BTB sing 100 n n O8 HO8 BTB sing 101 n n # _atom_sites.entry_id 8EHP _atom_sites.fract_transf_matrix[1][1] 0.007379 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005538 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 WJO A 1 901 901 WJO LIG . D 3 NAG A 1 902 1001 NAG NAG . E 4 SO4 A 1 903 1 SO4 SO4 . F 4 SO4 A 1 904 2 SO4 SO4 . G 4 SO4 A 1 905 3 SO4 SO4 . H 4 SO4 A 1 906 4 SO4 SO4 . I 4 SO4 A 1 907 5 SO4 SO4 . J 2 WJO B 1 901 901 WJO LIG . K 3 NAG B 1 902 1001 NAG NAG . L 5 BTB B 1 903 1101 BTB BTB . M 6 GOL B 1 904 1201 GOL GOL . N 4 SO4 B 1 905 6 SO4 SO4 . O 4 SO4 B 1 906 7 SO4 SO4 . P 4 SO4 B 1 907 8 SO4 SO4 . Q 4 SO4 B 1 908 9 SO4 SO4 . R 7 HOH A 1 1001 57 HOH HOH . R 7 HOH A 2 1002 61 HOH HOH . R 7 HOH A 3 1003 6 HOH HOH . R 7 HOH A 4 1004 14 HOH HOH . R 7 HOH A 5 1005 28 HOH HOH . R 7 HOH A 6 1006 34 HOH HOH . R 7 HOH A 7 1007 3 HOH HOH . R 7 HOH A 8 1008 25 HOH HOH . R 7 HOH A 9 1009 52 HOH HOH . R 7 HOH A 10 1010 16 HOH HOH . R 7 HOH A 11 1011 51 HOH HOH . R 7 HOH A 12 1012 35 HOH HOH . R 7 HOH A 13 1013 31 HOH HOH . R 7 HOH A 14 1014 8 HOH HOH . R 7 HOH A 15 1015 2 HOH HOH . R 7 HOH A 16 1016 46 HOH HOH . R 7 HOH A 17 1017 42 HOH HOH . R 7 HOH A 18 1018 53 HOH HOH . R 7 HOH A 19 1019 4 HOH HOH . R 7 HOH A 20 1020 41 HOH HOH . R 7 HOH A 21 1021 11 HOH HOH . R 7 HOH A 22 1022 19 HOH HOH . R 7 HOH A 23 1023 54 HOH HOH . R 7 HOH A 24 1024 39 HOH HOH . R 7 HOH A 25 1025 1 HOH HOH . S 7 HOH B 1 1001 45 HOH HOH . S 7 HOH B 2 1002 26 HOH HOH . S 7 HOH B 3 1003 32 HOH HOH . S 7 HOH B 4 1004 36 HOH HOH . S 7 HOH B 5 1005 7 HOH HOH . S 7 HOH B 6 1006 9 HOH HOH . S 7 HOH B 7 1007 48 HOH HOH . S 7 HOH B 8 1008 49 HOH HOH . S 7 HOH B 9 1009 58 HOH HOH . S 7 HOH B 10 1010 22 HOH HOH . S 7 HOH B 11 1011 12 HOH HOH . S 7 HOH B 12 1012 20 HOH HOH . S 7 HOH B 13 1013 17 HOH HOH . S 7 HOH B 14 1014 27 HOH HOH . S 7 HOH B 15 1015 47 HOH HOH . S 7 HOH B 16 1016 13 HOH HOH . S 7 HOH B 17 1017 21 HOH HOH . S 7 HOH B 18 1018 44 HOH HOH . S 7 HOH B 19 1019 56 HOH HOH . S 7 HOH B 20 1020 18 HOH HOH . S 7 HOH B 21 1021 43 HOH HOH . S 7 HOH B 22 1022 33 HOH HOH . S 7 HOH B 23 1023 23 HOH HOH . S 7 HOH B 24 1024 55 HOH HOH . S 7 HOH B 25 1025 38 HOH HOH . S 7 HOH B 26 1026 29 HOH HOH . S 7 HOH B 27 1027 37 HOH HOH . S 7 HOH B 28 1028 5 HOH HOH . S 7 HOH B 29 1029 24 HOH HOH . S 7 HOH B 30 1030 50 HOH HOH . S 7 HOH B 31 1031 30 HOH HOH . S 7 HOH B 32 1032 59 HOH HOH . S 7 HOH B 33 1033 10 HOH HOH . S 7 HOH B 34 1034 60 HOH HOH . S 7 HOH B 35 1035 15 HOH HOH . S 7 HOH B 36 1036 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BTB . . . L 5 -46.319 -30.093 -39.494 1 107.96 ? C1 BTB 903 B 1 HETATM 2 O O1 BTB . . . L 5 -46.606 -30.045 -40.885 1 96.17 ? O1 BTB 903 B 1 HETATM 3 C C2 BTB . . . L 5 -45.839 -28.739 -38.936 1 115.67 ? C2 BTB 903 B 1 HETATM 4 C C3 BTB . . . L 5 -46.569 -27.61 -39.686 1 117.66 ? C3 BTB 903 B 1 HETATM 5 O O3 BTB . . . L 5 -47.77 -27.198 -39.048 1 108.28 ? O3 BTB 903 B 1 HETATM 6 C C4 BTB . . . L 5 -46.129 -28.635 -37.423 1 111.45 ? C4 BTB 903 B 1 HETATM 7 O O4 BTB . . . L 5 -46.535 -29.839 -36.781 1 77.89 ? O4 BTB 903 B 1 HETATM 8 N N BTB . . . L 5 -44.334 -28.561 -39.188 1 101.73 ? N BTB 903 B 1 HETATM 9 C C5 BTB . . . L 5 -43.512 -29.76 -38.834 1 94.76 ? C5 BTB 903 B 1 HETATM 10 C C6 BTB . . . L 5 -42.958 -30.511 -40.022 1 98.3 ? C6 BTB 903 B 1 HETATM 11 O O6 BTB . . . L 5 -43.737 -30.298 -41.186 1 97.67 ? O6 BTB 903 B 1 HETATM 12 C C7 BTB . . . L 5 -43.751 -27.3 -38.62 1 90.36 ? C7 BTB 903 B 1 HETATM 13 C C8 BTB . . . L 5 -43.266 -26.366 -39.701 1 92.54 ? C8 BTB 903 B 1 HETATM 14 O O8 BTB . . . L 5 -43.457 -26.973 -40.965 1 91.28 ? O8 BTB 903 B 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 42 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 717 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #