data_8EI0 # _model_server_result.job_id zbWyvSC3yBcvrnWkWG3aJg _model_server_result.datetime_utc '2024-10-10 06:24:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ei0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":101}' # _entry.id 8EI0 # _exptl.entry_id 8EI0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.214 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N,N'-(1,4-phenylene)diacetamide" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 126.48 _cell.angle_gamma 90 _cell.entry_id 8EI0 _cell.length_a 82.56 _cell.length_b 46.96 _cell.length_c 53.62 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EI0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ACE 1 B ACE 5 1_555 B N PRO 2 B PRO 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 B SG CYS 3 B CYS 7 1_555 E CH WHL . B WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.829 ? covale ? covale3 B SG CYS 10 B CYS 14 1_555 E CK WHL . B WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.748 ? # _chem_comp.formula 'C10 H12 N2 O2' _chem_comp.formula_weight 192.214 _chem_comp.id WHL _chem_comp.mon_nstd_flag . _chem_comp.name "N,N'-(1,4-phenylene)diacetamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CK CJ WHL sing 397 n n CJ NB WHL sing 398 n n CJ OA WHL doub 399 n n NB CC WHL sing 400 n n CC CB WHL doub 401 n y CC CD WHL sing 402 n y CB CA WHL sing 403 n y CD CE WHL doub 404 n y CA CF WHL doub 405 n y CE CF WHL sing 406 n y CF NA WHL sing 407 n n OB CG WHL doub 408 n n NA CG WHL sing 409 n n CG CH WHL sing 410 n n CA H1 WHL sing 411 n n CB H2 WHL sing 412 n n NB H3 WHL sing 413 n n CD H4 WHL sing 414 n n CE H5 WHL sing 415 n n CH H6 WHL sing 416 n n CH H7 WHL sing 417 n n CH H8 WHL sing 418 n n CK H9 WHL sing 419 n n CK H10 WHL sing 420 n n CK H11 WHL sing 421 n n NA H12 WHL sing 422 n n # _atom_sites.entry_id 8EI0 _atom_sites.fract_transf_matrix[1][1] 0.012112 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008956 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021295 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023194 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 201 1 SO4 SO4 . D 3 SO4 A 1 202 2 SO4 SO4 . E 4 WHL B 1 101 101 WHL WHL . F 5 EDO B 1 102 2 EDO EDO . G 6 HOH A 1 301 128 HOH HOH . G 6 HOH A 2 302 51 HOH HOH . G 6 HOH A 3 303 73 HOH HOH . G 6 HOH A 4 304 78 HOH HOH . G 6 HOH A 5 305 58 HOH HOH . G 6 HOH A 6 306 109 HOH HOH . G 6 HOH A 7 307 133 HOH HOH . G 6 HOH A 8 308 50 HOH HOH . G 6 HOH A 9 309 96 HOH HOH . G 6 HOH A 10 310 27 HOH HOH . G 6 HOH A 11 311 43 HOH HOH . G 6 HOH A 12 312 1 HOH HOH . G 6 HOH A 13 313 60 HOH HOH . G 6 HOH A 14 314 33 HOH HOH . G 6 HOH A 15 315 79 HOH HOH . G 6 HOH A 16 316 17 HOH HOH . G 6 HOH A 17 317 100 HOH HOH . G 6 HOH A 18 318 113 HOH HOH . G 6 HOH A 19 319 97 HOH HOH . G 6 HOH A 20 320 22 HOH HOH . G 6 HOH A 21 321 40 HOH HOH . G 6 HOH A 22 322 23 HOH HOH . G 6 HOH A 23 323 39 HOH HOH . G 6 HOH A 24 324 70 HOH HOH . G 6 HOH A 25 325 18 HOH HOH . G 6 HOH A 26 326 81 HOH HOH . G 6 HOH A 27 327 8 HOH HOH . G 6 HOH A 28 328 124 HOH HOH . G 6 HOH A 29 329 16 HOH HOH . G 6 HOH A 30 330 49 HOH HOH . G 6 HOH A 31 331 135 HOH HOH . G 6 HOH A 32 332 21 HOH HOH . G 6 HOH A 33 333 34 HOH HOH . G 6 HOH A 34 334 103 HOH HOH . G 6 HOH A 35 335 85 HOH HOH . G 6 HOH A 36 336 101 HOH HOH . G 6 HOH A 37 337 64 HOH HOH . G 6 HOH A 38 338 46 HOH HOH . G 6 HOH A 39 339 31 HOH HOH . G 6 HOH A 40 340 72 HOH HOH . G 6 HOH A 41 341 14 HOH HOH . G 6 HOH A 42 342 2 HOH HOH . G 6 HOH A 43 343 13 HOH HOH . G 6 HOH A 44 344 25 HOH HOH . G 6 HOH A 45 345 127 HOH HOH . G 6 HOH A 46 346 9 HOH HOH . G 6 HOH A 47 347 104 HOH HOH . G 6 HOH A 48 348 6 HOH HOH . G 6 HOH A 49 349 38 HOH HOH . G 6 HOH A 50 350 45 HOH HOH . G 6 HOH A 51 351 99 HOH HOH . G 6 HOH A 52 352 98 HOH HOH . G 6 HOH A 53 353 5 HOH HOH . G 6 HOH A 54 354 3 HOH HOH . G 6 HOH A 55 355 74 HOH HOH . G 6 HOH A 56 356 136 HOH HOH . G 6 HOH A 57 357 24 HOH HOH . G 6 HOH A 58 358 7 HOH HOH . G 6 HOH A 59 359 4 HOH HOH . G 6 HOH A 60 360 106 HOH HOH . G 6 HOH A 61 361 37 HOH HOH . G 6 HOH A 62 362 93 HOH HOH . G 6 HOH A 63 363 20 HOH HOH . G 6 HOH A 64 364 62 HOH HOH . G 6 HOH A 65 365 19 HOH HOH . G 6 HOH A 66 366 10 HOH HOH . G 6 HOH A 67 367 48 HOH HOH . G 6 HOH A 68 368 26 HOH HOH . G 6 HOH A 69 369 120 HOH HOH . G 6 HOH A 70 370 36 HOH HOH . G 6 HOH A 71 371 123 HOH HOH . G 6 HOH A 72 372 111 HOH HOH . G 6 HOH A 73 373 35 HOH HOH . G 6 HOH A 74 374 47 HOH HOH . G 6 HOH A 75 375 84 HOH HOH . G 6 HOH A 76 376 57 HOH HOH . G 6 HOH A 77 377 125 HOH HOH . G 6 HOH A 78 378 112 HOH HOH . G 6 HOH A 79 379 66 HOH HOH . G 6 HOH A 80 380 75 HOH HOH . G 6 HOH A 81 381 15 HOH HOH . G 6 HOH A 82 382 105 HOH HOH . G 6 HOH A 83 383 83 HOH HOH . G 6 HOH A 84 384 102 HOH HOH . G 6 HOH A 85 385 32 HOH HOH . G 6 HOH A 86 386 121 HOH HOH . G 6 HOH A 87 387 29 HOH HOH . G 6 HOH A 88 388 95 HOH HOH . G 6 HOH A 89 389 11 HOH HOH . G 6 HOH A 90 390 107 HOH HOH . G 6 HOH A 91 391 53 HOH HOH . G 6 HOH A 92 392 41 HOH HOH . G 6 HOH A 93 393 137 HOH HOH . G 6 HOH A 94 394 30 HOH HOH . G 6 HOH A 95 395 80 HOH HOH . G 6 HOH A 96 396 138 HOH HOH . G 6 HOH A 97 397 89 HOH HOH . G 6 HOH A 98 398 114 HOH HOH . G 6 HOH A 99 399 126 HOH HOH . G 6 HOH A 100 400 63 HOH HOH . G 6 HOH A 101 401 71 HOH HOH . G 6 HOH A 102 402 44 HOH HOH . G 6 HOH A 103 403 67 HOH HOH . G 6 HOH A 104 404 94 HOH HOH . G 6 HOH A 105 405 56 HOH HOH . G 6 HOH A 106 406 68 HOH HOH . G 6 HOH A 107 407 52 HOH HOH . G 6 HOH A 108 408 54 HOH HOH . G 6 HOH A 109 409 115 HOH HOH . G 6 HOH A 110 410 76 HOH HOH . G 6 HOH A 111 411 132 HOH HOH . G 6 HOH A 112 412 118 HOH HOH . G 6 HOH A 113 413 82 HOH HOH . G 6 HOH A 114 414 55 HOH HOH . G 6 HOH A 115 415 28 HOH HOH . G 6 HOH A 116 416 108 HOH HOH . G 6 HOH A 117 417 139 HOH HOH . G 6 HOH A 118 418 91 HOH HOH . G 6 HOH A 119 419 59 HOH HOH . G 6 HOH A 120 420 92 HOH HOH . G 6 HOH A 121 421 129 HOH HOH . G 6 HOH A 122 422 134 HOH HOH . G 6 HOH A 123 423 130 HOH HOH . H 6 HOH B 1 201 86 HOH HOH . H 6 HOH B 2 202 90 HOH HOH . H 6 HOH B 3 203 141 HOH HOH . H 6 HOH B 4 204 12 HOH HOH . H 6 HOH B 5 205 140 HOH HOH . H 6 HOH B 6 206 119 HOH HOH . H 6 HOH B 7 207 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA WHL . . . E 4 2.208 5.755 4.57 1 24.65 ? CA WHL 101 B 1 HETATM 2 C CB WHL . . . E 4 2.763 6.01 3.33 1 25.63 ? CB WHL 101 B 1 HETATM 3 N NB WHL . . . E 4 2.579 6.837 0.983 1 36.08 ? NB WHL 101 B 1 HETATM 4 O OB WHL . . . E 4 -1.614 4.7 5.58 1 36.62 ? OB WHL 101 B 1 HETATM 5 C CG WHL . . . E 4 -0.895 5.085 6.439 1 31.39 ? CG WHL 101 B 1 HETATM 6 C CD WHL . . . E 4 0.667 6.824 2.549 1 32.62 ? CD WHL 101 B 1 HETATM 7 C CE WHL . . . E 4 0.102 6.577 3.798 1 32.77 ? CE WHL 101 B 1 HETATM 8 C CH WHL . . . E 4 -1.271 4.879 7.902 1 33.49 ? CH WHL 101 B 1 HETATM 9 C CC WHL . . . E 4 2.002 6.534 2.297 1 25.83 ? CC WHL 101 B 1 HETATM 10 C CF WHL . . . E 4 0.87 6.036 4.812 1 24.07 ? CF WHL 101 B 1 HETATM 11 C CJ WHL . . . E 4 4.01 6.724 0.688 1 36 ? CJ WHL 101 B 1 HETATM 12 C CK WHL . . . E 4 4.577 7.086 -0.693 1 19.53 ? CK WHL 101 B 1 HETATM 13 N NA WHL . . . E 4 0.354 5.764 6.136 1 27.02 ? NA WHL 101 B 1 HETATM 14 O OA WHL . . . E 4 4.778 6.334 1.501 1 35.81 ? OA WHL 101 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #