data_8EI4
#
_model_server_result.job_id            nav-7PtE7b1fVzTMrNiQbA 
_model_server_result.datetime_utc      '2024-10-10 06:28:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ei4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":101}' 
#
_entry.id    8EI4 
#
_exptl.entry_id    8EI4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.214 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "N,N'-(1,4-phenylene)diacetamide" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         112.09 
_cell.angle_beta          99.61 
_cell.angle_gamma         102.51 
_cell.entry_id            8EI4 
_cell.length_a            45.42 
_cell.length_b            51.21 
_cell.length_c            58.64 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8EI4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B SG CYS 8 B CYS 7 1_555 G CH WHL . B WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? 
covale ? covale2 B SG CYS 15 B CYS 14 1_555 G CK WHL . B WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.827 ? 
#
_chem_comp.formula           'C10 H12 N2 O2' 
_chem_comp.formula_weight    192.214 
_chem_comp.id                WHL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "N,N'-(1,4-phenylene)diacetamide" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CK CJ WHL sing 393 n n 
CJ NB WHL sing 394 n n 
CJ OA WHL doub 395 n n 
NB CC WHL sing 396 n n 
CC CB WHL doub 397 n y 
CC CD WHL sing 398 n y 
CB CA WHL sing 399 n y 
CD CE WHL doub 400 n y 
CA CF WHL doub 401 n y 
CE CF WHL sing 402 n y 
CF NA WHL sing 403 n n 
OB CG WHL doub 404 n n 
NA CG WHL sing 405 n n 
CG CH WHL sing 406 n n 
CA H1 WHL sing 407 n n 
CB H2 WHL sing 408 n n 
NB H3 WHL sing 409 n n 
CD H4 WHL sing 410 n n 
CE H5 WHL sing 411 n n 
CH H6 WHL sing 412 n n 
CH H7 WHL sing 413 n n 
CH H8 WHL sing 414 n n 
CK H9 WHL sing 415 n n 
CK H10 WHL sing 416 n n 
CK H11 WHL sing 417 n n 
NA H12 WHL sing 418 n n 
#
_atom_sites.entry_id                     8EI4 
_atom_sites.fract_transf_matrix[1][1]    0.022017 
_atom_sites.fract_transf_matrix[1][2]    0.004885 
_atom_sites.fract_transf_matrix[1][3]    0.006439 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020002 
_atom_sites.fract_transf_matrix[2][3]    0.009478 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019139 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 EDO A 1 1001 1 EDO EDO . 
D 3 EDO A 1 1002 2 EDO EDO . 
E 3 EDO A 1 1003 3 EDO EDO . 
F 3 EDO A 1 1004 5 EDO EDO . 
G 4 WHL B 1 101 101 WHL WHL . 
H 5 HOH A 1 1101 22 HOH HOH . 
H 5 HOH A 2 1102 27 HOH HOH . 
H 5 HOH A 3 1103 17 HOH HOH . 
H 5 HOH A 4 1104 31 HOH HOH . 
H 5 HOH A 5 1105 18 HOH HOH . 
H 5 HOH A 6 1106 1 HOH HOH . 
H 5 HOH A 7 1107 36 HOH HOH . 
H 5 HOH A 8 1108 40 HOH HOH . 
H 5 HOH A 9 1109 3 HOH HOH . 
H 5 HOH A 10 1110 19 HOH HOH . 
H 5 HOH A 11 1111 21 HOH HOH . 
H 5 HOH A 12 1112 37 HOH HOH . 
H 5 HOH A 13 1113 26 HOH HOH . 
H 5 HOH A 14 1114 28 HOH HOH . 
H 5 HOH A 15 1115 9 HOH HOH . 
H 5 HOH A 16 1116 6 HOH HOH . 
H 5 HOH A 17 1117 5 HOH HOH . 
H 5 HOH A 18 1118 8 HOH HOH . 
H 5 HOH A 19 1119 30 HOH HOH . 
H 5 HOH A 20 1120 32 HOH HOH . 
H 5 HOH A 21 1121 24 HOH HOH . 
H 5 HOH A 22 1122 29 HOH HOH . 
H 5 HOH A 23 1123 13 HOH HOH . 
H 5 HOH A 24 1124 10 HOH HOH . 
H 5 HOH A 25 1125 25 HOH HOH . 
H 5 HOH A 26 1126 38 HOH HOH . 
H 5 HOH A 27 1127 39 HOH HOH . 
H 5 HOH A 28 1128 20 HOH HOH . 
H 5 HOH A 29 1129 12 HOH HOH . 
H 5 HOH A 30 1130 14 HOH HOH . 
H 5 HOH A 31 1131 2 HOH HOH . 
H 5 HOH A 32 1132 16 HOH HOH . 
H 5 HOH A 33 1133 34 HOH HOH . 
H 5 HOH A 34 1134 7 HOH HOH . 
H 5 HOH A 35 1135 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CA WHL . . . G 4 -24.545 8.869 91.472 1 65.96 ? CA WHL 101 B 1 
HETATM 2 C CB WHL . . . G 4 -24.333 7.527 91.208 1 66.35 ? CB WHL 101 B 1 
HETATM 3 N NB WHL . . . G 4 -23.146 5.423 91.525 1 62.61 ? NB WHL 101 B 1 
HETATM 4 O OB WHL . . . G 4 -22.792 11.403 94.52 1 83.39 ? OB WHL 101 B 1 
HETATM 5 C CG WHL . . . G 4 -23.512 11.818 93.673 1 84.51 ? CG WHL 101 B 1 
HETATM 6 C CD WHL . . . G 4 -22.515 7.507 92.773 1 62.19 ? CD WHL 101 B 1 
HETATM 7 C CE WHL . . . G 4 -22.727 8.855 93.038 1 69.53 ? CE WHL 101 B 1 
HETATM 8 C CH WHL . . . G 4 -23.929 13.294 93.685 1 84.69 ? CH WHL 101 B 1 
HETATM 9 C CC WHL . . . G 4 -23.325 6.835 91.863 1 67.03 ? CC WHL 101 B 1 
HETATM 10 C CF WHL . . . G 4 -23.749 9.539 92.39 1 71.32 ? CF WHL 101 B 1 
HETATM 11 C CJ WHL . . . G 4 -22.123 4.523 92.063 1 67.73 ? CJ WHL 101 B 1 
HETATM 12 C CK WHL . . . G 4 -22.101 3.092 91.537 1 64.71 ? CK WHL 101 B 1 
HETATM 13 N NA WHL . . . G 4 -24.023 10.96 92.605 1 80.23 ? NA WHL 101 B 1 
HETATM 14 O OA WHL . . . G 4 -21.316 4.847 92.88 1 70.22 ? OA WHL 101 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           14 
#