data_8EI8 # _model_server_result.job_id iY2-0yk6ekskvoOeYEP6tQ _model_server_result.datetime_utc '2025-01-12 01:59:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ei8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":101}' # _entry.id 8EI8 # _exptl.entry_id 8EI8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.214 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N,N'-(1,4-phenylene)diacetamide" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8EI8 _cell.length_a 111.38 _cell.length_b 117.81 _cell.length_c 65.39 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EI8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B SG CYS 8 B CYS 7 1_555 H CK WHL . B WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.833 ? covale ? covale2 B SG CYS 15 B CYS 14 1_555 H CH WHL . B WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.803 ? # _chem_comp.formula 'C10 H12 N2 O2' _chem_comp.formula_weight 192.214 _chem_comp.id WHL _chem_comp.mon_nstd_flag . _chem_comp.name "N,N'-(1,4-phenylene)diacetamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CK CJ WHL sing 444 n n CJ NB WHL sing 445 n n CJ OA WHL doub 446 n n NB CC WHL sing 447 n n CC CB WHL doub 448 n y CC CD WHL sing 449 n y CB CA WHL sing 450 n y CD CE WHL doub 451 n y CA CF WHL doub 452 n y CE CF WHL sing 453 n y CF NA WHL sing 454 n n OB CG WHL doub 455 n n NA CG WHL sing 456 n n CG CH WHL sing 457 n n CA H1 WHL sing 458 n n CB H2 WHL sing 459 n n NB H3 WHL sing 460 n n CD H4 WHL sing 461 n n CE H5 WHL sing 462 n n CH H6 WHL sing 463 n n CH H7 WHL sing 464 n n CH H8 WHL sing 465 n n CK H9 WHL sing 466 n n CK H10 WHL sing 467 n n CK H11 WHL sing 468 n n NA H12 WHL sing 469 n n # _atom_sites.entry_id 8EI8 _atom_sites.fract_transf_matrix[1][1] 0.008978 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008488 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015293 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PG4 A 1 901 1 PG4 PG4 . D 4 EDO A 1 902 1 EDO EDO . E 4 EDO A 1 903 2 EDO EDO . F 4 EDO A 1 904 3 EDO EDO . G 5 PGE A 1 905 1 PGE PGE . H 6 WHL B 1 101 101 WHL WHL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA WHL . . . H 6 -0.23 -29.779 14.16 1 77.65 ? CA WHL 101 B 1 HETATM 2 C CB WHL . . . H 6 -1.021 -30.362 15.129 1 75.9 ? CB WHL 101 B 1 HETATM 3 N NB WHL . . . H 6 -2.588 -30.28 16.997 1 77.84 ? NB WHL 101 B 1 HETATM 4 O OB WHL . . . H 6 0.315 -29.383 11.382 1 84.04 ? OB WHL 101 B 1 HETATM 5 C CG WHL . . . H 6 0.85 -28.374 11.696 1 85.43 ? CG WHL 101 B 1 HETATM 6 C CD WHL . . . H 6 -1.734 -28.209 15.878 1 65.59 ? CD WHL 101 B 1 HETATM 7 C CE WHL . . . H 6 -0.941 -27.617 14.901 1 69.42 ? CE WHL 101 B 1 HETATM 8 C CH WHL . . . H 6 1.761 -27.675 10.689 1 93.72 ? CH WHL 101 B 1 HETATM 9 C CC WHL . . . H 6 -1.785 -29.592 15.989 1 76.77 ? CC WHL 101 B 1 HETATM 10 C CF WHL . . . H 6 -0.19 -28.401 14.036 1 76.77 ? CF WHL 101 B 1 HETATM 11 C CJ WHL . . . H 6 -3.89 -29.861 17.501 1 72.43 ? CJ WHL 101 B 1 HETATM 12 C CK WHL . . . H 6 -4.591 -28.595 17.012 1 71.25 ? CK WHL 101 B 1 HETATM 13 N NA WHL . . . H 6 0.655 -27.787 13.018 1 78.87 ? NA WHL 101 B 1 HETATM 14 O OA WHL . . . H 6 -4.423 -30.527 18.322 1 72.07 ? OA WHL 101 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #