data_8EIX
#
_model_server_result.job_id            VeBgd69MfjmIFJlRWKytFg 
_model_server_result.datetime_utc      '2024-11-25 08:26:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8eix 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":403}' 
#
_entry.id    8EIX 
#
_exptl.entry_id    8EIX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              665.441 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         72.32 
_cell.angle_beta          74.88 
_cell.angle_gamma         71.6 
_cell.entry_id            8EIX 
_cell.length_a            56.27 
_cell.length_b            57.56 
_cell.length_c            68.25 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8EIX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 70 A HIS 67 1_555 C CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
metalc ? metalc2 A SG CYS 100 A CYS 97 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
metalc ? metalc3 A SG CYS 103 A CYS 100 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc4 A SG CYS 106 A CYS 103 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc5 A SG CYS 114 A CYS 111 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc6 C CO CO . A CO 401 1_555 F O9 CXF . A CXF 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? 
metalc ? metalc7 B NE2 HIS 70 B HIS 67 1_555 G CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc8 B SG CYS 100 B CYS 97 1_555 H ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
metalc ? metalc9 B SG CYS 103 B CYS 100 1_555 H ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? 
metalc ? metalc10 B SG CYS 106 B CYS 103 1_555 H ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc11 B SG CYS 114 B CYS 111 1_555 H ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
#
_chem_comp.formula           'C21 H29 N7 O14 P2' 
_chem_comp.formula_weight    665.441 
_chem_comp.id                NAI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     NADH 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAI doub 259 n n 
PA O2A NAI sing 260 n n 
PA O5B NAI sing 261 n n 
PA O3 NAI sing 262 n n 
O2A HOA2 NAI sing 263 n n 
O5B C5B NAI sing 264 n n 
C5B C4B NAI sing 265 n n 
C5B H51A NAI sing 266 n n 
C5B H52A NAI sing 267 n n 
C4B O4B NAI sing 268 n n 
C4B C3B NAI sing 269 n n 
C4B H4B NAI sing 270 n n 
O4B C1B NAI sing 271 n n 
C3B O3B NAI sing 272 n n 
C3B C2B NAI sing 273 n n 
C3B H3B NAI sing 274 n n 
O3B HO3A NAI sing 275 n n 
C2B O2B NAI sing 276 n n 
C2B C1B NAI sing 277 n n 
C2B H2B NAI sing 278 n n 
O2B HO2A NAI sing 279 n n 
C1B N9A NAI sing 280 n n 
C1B H1B NAI sing 281 n n 
N9A C8A NAI sing 282 n y 
N9A C4A NAI sing 283 n y 
C8A N7A NAI doub 284 n y 
C8A H8A NAI sing 285 n n 
N7A C5A NAI sing 286 n y 
C5A C6A NAI sing 287 n y 
C5A C4A NAI doub 288 n y 
C6A N6A NAI sing 289 n n 
C6A N1A NAI doub 290 n y 
N6A H61A NAI sing 291 n n 
N6A H62A NAI sing 292 n n 
N1A C2A NAI sing 293 n y 
C2A N3A NAI doub 294 n y 
C2A H2A NAI sing 295 n n 
N3A C4A NAI sing 296 n y 
O3 PN NAI sing 297 n n 
PN O1N NAI sing 298 n n 
PN O2N NAI doub 299 n n 
PN O5D NAI sing 300 n n 
O1N HO1N NAI sing 301 n n 
O5D C5D NAI sing 302 n n 
C5D C4D NAI sing 303 n n 
C5D H51N NAI sing 304 n n 
C5D H52N NAI sing 305 n n 
C4D O4D NAI sing 306 n n 
C4D C3D NAI sing 307 n n 
C4D H4D NAI sing 308 n n 
O4D C1D NAI sing 309 n n 
C3D O3D NAI sing 310 n n 
C3D C2D NAI sing 311 n n 
C3D H3D NAI sing 312 n n 
O3D HO3N NAI sing 313 n n 
C2D O2D NAI sing 314 n n 
C2D C1D NAI sing 315 n n 
C2D H2D NAI sing 316 n n 
O2D HO2N NAI sing 317 n n 
C1D N1N NAI sing 318 n n 
C1D H1D NAI sing 319 n n 
N1N C2N NAI sing 320 n n 
N1N C6N NAI sing 321 n n 
C2N C3N NAI doub 322 n n 
C2N H2N NAI sing 323 n n 
C3N C7N NAI sing 324 n n 
C3N C4N NAI sing 325 n n 
C7N O7N NAI doub 326 n n 
C7N N7N NAI sing 327 n n 
N7N H71N NAI sing 328 n n 
N7N H72N NAI sing 329 n n 
C4N C5N NAI sing 330 n n 
C4N H4N NAI sing 331 n n 
C4N H42N NAI sing 332 n n 
C5N C6N NAI doub 333 n n 
C5N H5N NAI sing 334 n n 
C6N H6N NAI sing 335 n n 
#
_atom_sites.entry_id                     8EIX 
_atom_sites.fract_transf_matrix[1][1]    0.017771 
_atom_sites.fract_transf_matrix[1][2]    -0.005912 
_atom_sites.fract_transf_matrix[1][3]    -0.003477 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018309 
_atom_sites.fract_transf_matrix[2][3]    -0.004558 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015641 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CO A 1 401 375 CO CO . 
D 3 ZN A 1 402 376 ZN ZN . 
E 4 NAI A 1 403 401 NAI NAI . 
F 5 CXF A 1 404 501 CXF CXF . 
G 2 CO B 1 401 375 CO CO . 
H 3 ZN B 1 402 376 ZN ZN . 
I 4 NAI B 1 403 401 NAI NAI . 
J 5 CXF B 1 404 501 CXF CXF . 
K 6 HOH A 1 501 1 HOH HOH . 
K 6 HOH A 2 502 14 HOH HOH . 
K 6 HOH A 3 503 22 HOH HOH . 
K 6 HOH A 4 504 17 HOH HOH . 
K 6 HOH A 5 505 8 HOH HOH . 
K 6 HOH A 6 506 6 HOH HOH . 
K 6 HOH A 7 507 3 HOH HOH . 
K 6 HOH A 8 508 24 HOH HOH . 
K 6 HOH A 9 509 15 HOH HOH . 
K 6 HOH A 10 510 23 HOH HOH . 
K 6 HOH A 11 511 25 HOH HOH . 
K 6 HOH A 12 512 5 HOH HOH . 
K 6 HOH A 13 513 18 HOH HOH . 
K 6 HOH A 14 514 4 HOH HOH . 
K 6 HOH A 15 515 27 HOH HOH . 
K 6 HOH A 16 516 9 HOH HOH . 
L 6 HOH B 1 501 11 HOH HOH . 
L 6 HOH B 2 502 26 HOH HOH . 
L 6 HOH B 3 503 12 HOH HOH . 
L 6 HOH B 4 504 7 HOH HOH . 
L 6 HOH B 5 505 10 HOH HOH . 
L 6 HOH B 6 506 19 HOH HOH . 
L 6 HOH B 7 507 2 HOH HOH . 
L 6 HOH B 8 508 16 HOH HOH . 
L 6 HOH B 9 509 21 HOH HOH . 
L 6 HOH B 10 510 20 HOH HOH . 
L 6 HOH B 11 511 13 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAI . . . E 4 -15.817 -21.382 19.523 1 65.55 ? PA NAI 403 A 1 
HETATM 2 O O1A NAI . . . E 4 -15.841 -22.215 20.782 1 63.78 ? O1A NAI 403 A 1 
HETATM 3 O O2A NAI . . . E 4 -16.649 -20.137 19.717 1 68.1 ? O2A NAI 403 A 1 
HETATM 4 O O5B NAI . . . E 4 -16.427 -22.267 18.274 1 57.98 ? O5B NAI 403 A 1 
HETATM 5 C C5B NAI . . . E 4 -16.304 -23.66 18.337 1 51.43 ? C5B NAI 403 A 1 
HETATM 6 C C4B NAI . . . E 4 -17.575 -24.309 17.731 1 56.26 ? C4B NAI 403 A 1 
HETATM 7 O O4B NAI . . . E 4 -17.353 -25.571 17.474 1 52.65 ? O4B NAI 403 A 1 
HETATM 8 C C3B NAI . . . E 4 -18.722 -24.27 18.765 1 62.36 ? C3B NAI 403 A 1 
HETATM 9 O O3B NAI . . . E 4 -19.815 -23.675 18.224 1 62.91 ? O3B NAI 403 A 1 
HETATM 10 C C2B NAI . . . E 4 -19.015 -25.749 19.086 1 56.92 ? C2B NAI 403 A 1 
HETATM 11 O O2B NAI . . . E 4 -20.475 -25.941 19.347 1 50.66 ? O2B NAI 403 A 1 
HETATM 12 C C1B NAI . . . E 4 -18.645 -26.381 18.006 1 49.13 ? C1B NAI 403 A 1 
HETATM 13 N N9A NAI . . . E 4 -18.285 -27.748 18.292 1 53.38 ? N9A NAI 403 A 1 
HETATM 14 C C8A NAI . . . E 4 -17.713 -28.169 19.422 1 53.16 ? C8A NAI 403 A 1 
HETATM 15 N N7A NAI . . . E 4 -17.529 -29.489 19.326 1 53.34 ? N7A NAI 403 A 1 
HETATM 16 C C5A NAI . . . E 4 -17.986 -29.887 18.132 1 49.39 ? C5A NAI 403 A 1 
HETATM 17 C C6A NAI . . . E 4 -18.037 -31.127 17.532 1 54.78 ? C6A NAI 403 A 1 
HETATM 18 N N6A NAI . . . E 4 -17.599 -32.423 18.02 1 56.66 ? N6A NAI 403 A 1 
HETATM 19 N N1A NAI . . . E 4 -18.549 -31.255 16.319 1 56.03 ? N1A NAI 403 A 1 
HETATM 20 C C2A NAI . . . E 4 -19.024 -30.168 15.667 1 51.04 ? C2A NAI 403 A 1 
HETATM 21 N N3A NAI . . . E 4 -18.975 -28.949 16.254 1 54.06 ? N3A NAI 403 A 1 
HETATM 22 C C4A NAI . . . E 4 -18.454 -28.813 17.489 1 51.8 ? C4A NAI 403 A 1 
HETATM 23 O O3 NAI . . . E 4 -14.263 -20.967 19.167 1 63.4 ? O3 NAI 403 A 1 
HETATM 24 P PN NAI . . . E 4 -13.823 -19.933 17.962 1 57.87 ? PN NAI 403 A 1 
HETATM 25 O O1N NAI . . . E 4 -13.622 -18.545 18.521 1 63.43 ? O1N NAI 403 A 1 
HETATM 26 O O2N NAI . . . E 4 -14.895 -19.901 16.897 1 51.88 ? O2N NAI 403 A 1 
HETATM 27 O O5D NAI . . . E 4 -12.411 -20.484 17.312 1 59 ? O5D NAI 403 A 1 
HETATM 28 C C5D NAI . . . E 4 -12.404 -21.769 16.758 1 54.93 ? C5D NAI 403 A 1 
HETATM 29 C C4D NAI . . . E 4 -10.959 -22.34 16.738 1 55.94 ? C4D NAI 403 A 1 
HETATM 30 O O4D NAI . . . E 4 -10.179 -21.582 16.012 1 54.2 ? O4D NAI 403 A 1 
HETATM 31 C C3D NAI . . . E 4 -10.344 -22.339 18.157 1 51.18 ? C3D NAI 403 A 1 
HETATM 32 O O3D NAI . . . E 4 -9.859 -23.573 18.445 1 58.93 ? O3D NAI 403 A 1 
HETATM 33 C C2D NAI . . . E 4 -9.181 -21.337 18.069 1 51.7 ? C2D NAI 403 A 1 
HETATM 34 O O2D NAI . . . E 4 -8.09 -21.722 19.015 1 61.53 ? O2D NAI 403 A 1 
HETATM 35 C C1D NAI . . . E 4 -8.795 -21.484 16.835 1 49.52 ? C1D NAI 403 A 1 
HETATM 36 N N1N NAI . . . E 4 -8.034 -20.356 16.369 1 49.75 ? N1N NAI 403 A 1 
HETATM 37 C C2N NAI . . . E 4 -6.888 -20.565 15.508 1 53.96 ? C2N NAI 403 A 1 
HETATM 38 C C3N NAI . . . E 4 -6.241 -19.397 14.772 1 47.92 ? C3N NAI 403 A 1 
HETATM 39 C C7N NAI . . . E 4 -5.085 -19.653 13.806 1 53.03 ? C7N NAI 403 A 1 
HETATM 40 O O7N NAI . . . E 4 -4.378 -18.756 13.488 1 48.5 ? O7N NAI 403 A 1 
HETATM 41 N N7N NAI . . . E 4 -4.858 -20.988 13.277 1 44.56 ? N7N NAI 403 A 1 
HETATM 42 C C4N NAI . . . E 4 -6.742 -17.967 14.976 1 52.89 ? C4N NAI 403 A 1 
HETATM 43 C C5N NAI . . . E 4 -8.004 -17.86 15.833 1 62.61 ? C5N NAI 403 A 1 
HETATM 44 C C6N NAI . . . E 4 -8.42 -19.013 16.738 1 50.26 ? C6N NAI 403 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           56 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           44 
#