data_8EIX # _model_server_result.job_id TyMEzN-_7oRvddNWSG0ZiA _model_server_result.datetime_utc '2024-11-25 08:27:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8eix # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":404}' # _entry.id 8EIX # _exptl.entry_id 8EIX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 127.184 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CYCLOHEXYLFORMAMIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 72.32 _cell.angle_beta 74.88 _cell.angle_gamma 71.6 _cell.entry_id 8EIX _cell.length_a 56.27 _cell.length_b 57.56 _cell.length_c 68.25 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EIX _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 70 A HIS 67 1_555 C CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc2 A SG CYS 100 A CYS 97 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc3 A SG CYS 103 A CYS 100 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc4 A SG CYS 106 A CYS 103 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc5 A SG CYS 114 A CYS 111 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc6 C CO CO . A CO 401 1_555 F O9 CXF . A CXF 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? metalc ? metalc7 B NE2 HIS 70 B HIS 67 1_555 G CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc8 B SG CYS 100 B CYS 97 1_555 H ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc9 B SG CYS 103 B CYS 100 1_555 H ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc10 B SG CYS 106 B CYS 103 1_555 H ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc11 B SG CYS 114 B CYS 111 1_555 H ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? # _chem_comp.formula 'C7 H13 N O' _chem_comp.formula_weight 127.184 _chem_comp.id CXF _chem_comp.mon_nstd_flag . _chem_comp.name CYCLOHEXYLFORMAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CXF sing 70 n n C1 C6 CXF sing 71 n n C1 N8 CXF sing 72 n n C1 H1 CXF sing 73 n n C2 C3 CXF sing 74 n n C2 H21 CXF sing 75 n n C2 H22 CXF sing 76 n n C3 C4 CXF sing 77 n n C3 H31 CXF sing 78 n n C3 H32 CXF sing 79 n n C4 C5 CXF sing 80 n n C4 H41 CXF sing 81 n n C4 H42 CXF sing 82 n n C5 C6 CXF sing 83 n n C5 H51 CXF sing 84 n n C5 H52 CXF sing 85 n n C6 H61 CXF sing 86 n n C6 H62 CXF sing 87 n n N8 C7 CXF sing 88 n n N8 HN8 CXF sing 89 n n C7 O9 CXF doub 90 n n C7 H7 CXF sing 91 n n # _atom_sites.entry_id 8EIX _atom_sites.fract_transf_matrix[1][1] 0.017771 _atom_sites.fract_transf_matrix[1][2] -0.005912 _atom_sites.fract_transf_matrix[1][3] -0.003477 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018309 _atom_sites.fract_transf_matrix[2][3] -0.004558 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015641 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 401 375 CO CO . D 3 ZN A 1 402 376 ZN ZN . E 4 NAI A 1 403 401 NAI NAI . F 5 CXF A 1 404 501 CXF CXF . G 2 CO B 1 401 375 CO CO . H 3 ZN B 1 402 376 ZN ZN . I 4 NAI B 1 403 401 NAI NAI . J 5 CXF B 1 404 501 CXF CXF . K 6 HOH A 1 501 1 HOH HOH . K 6 HOH A 2 502 14 HOH HOH . K 6 HOH A 3 503 22 HOH HOH . K 6 HOH A 4 504 17 HOH HOH . K 6 HOH A 5 505 8 HOH HOH . K 6 HOH A 6 506 6 HOH HOH . K 6 HOH A 7 507 3 HOH HOH . K 6 HOH A 8 508 24 HOH HOH . K 6 HOH A 9 509 15 HOH HOH . K 6 HOH A 10 510 23 HOH HOH . K 6 HOH A 11 511 25 HOH HOH . K 6 HOH A 12 512 5 HOH HOH . K 6 HOH A 13 513 18 HOH HOH . K 6 HOH A 14 514 4 HOH HOH . K 6 HOH A 15 515 27 HOH HOH . K 6 HOH A 16 516 9 HOH HOH . L 6 HOH B 1 501 11 HOH HOH . L 6 HOH B 2 502 26 HOH HOH . L 6 HOH B 3 503 12 HOH HOH . L 6 HOH B 4 504 7 HOH HOH . L 6 HOH B 5 505 10 HOH HOH . L 6 HOH B 6 506 19 HOH HOH . L 6 HOH B 7 507 2 HOH HOH . L 6 HOH B 8 508 16 HOH HOH . L 6 HOH B 9 509 21 HOH HOH . L 6 HOH B 10 510 20 HOH HOH . L 6 HOH B 11 511 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CXF . . . J 5 -0.414 -48.117 -8.009 1 69.94 ? C1 CXF 404 B 1 HETATM 2 C C2 CXF . . . J 5 -1.181 -46.818 -7.842 1 65.27 ? C2 CXF 404 B 1 HETATM 3 C C3 CXF . . . J 5 -1.335 -46.47 -6.363 1 72.94 ? C3 CXF 404 B 1 HETATM 4 C C4 CXF . . . J 5 -2.013 -47.596 -5.608 1 76.19 ? C4 CXF 404 B 1 HETATM 5 C C5 CXF . . . J 5 -1.242 -48.888 -5.774 1 77.71 ? C5 CXF 404 B 1 HETATM 6 C C6 CXF . . . J 5 -1.087 -49.247 -7.251 1 77.74 ? C6 CXF 404 B 1 HETATM 7 N N8 CXF . . . J 5 -0.288 -48.455 -9.427 1 79.77 ? N8 CXF 404 B 1 HETATM 8 C C7 CXF . . . J 5 0.884 -48.613 -10.027 1 78.2 ? C7 CXF 404 B 1 HETATM 9 O O9 CXF . . . J 5 1.985 -48.556 -9.478 1 78.89 ? O9 CXF 404 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 43 _model_server_stats.query_time_ms 470 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 9 #