data_8ELK # _model_server_result.job_id jaQkwUtUJ4zevSR8LgXHCw _model_server_result.datetime_utc '2024-11-14 23:24:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8elk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 8ELK # _exptl.entry_id 8ELK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8ELK _cell.length_a 88.147 _cell.length_b 88.147 _cell.length_c 133.27 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ELK _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 3 A GLU 3 1_555 F CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc2 A OG SER 17 A SER 17 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc3 A O PHE 28 A PHE 28 1_555 D CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc4 A OD2 ASP 30 A ASP 30 1_555 D CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc5 A OE2 GLU 31 A GLU 31 1_555 D CA CA . A CA 203 5_674 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc6 A OD1 ASP 33 A ASP 33 1_555 D CA CA . A CA 203 5_674 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc7 A OD2 ASP 33 A ASP 33 1_555 D CA CA . A CA 203 5_674 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc8 A OG1 THR 35 A THR 35 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc9 A OE1 GLU 76 A GLU 76 1_555 F CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? metalc ? metalc10 A OE2 GLU 76 A GLU 76 1_555 F CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc11 A O ARG 102 A ARG 102 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc12 A O ARG 102 A ARG 102 1_555 G NA NA . A NA 206 6_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc13 A OD1 ASP 105 A ASP 105 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc14 A OD2 ASP 105 A ASP 105 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc15 A OD1 ASP 105 A ASP 105 1_555 G NA NA . A NA 206 6_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc16 A OD2 ASP 105 A ASP 105 1_555 G NA NA . A NA 206 6_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc17 B O2G GNP . A GNP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc18 B O2B GNP . A GNP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc19 C MG MG . A MG 202 1_555 H O HOH . A HOH 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc20 C MG MG . A MG 202 1_555 H O HOH . A HOH 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc21 D CA CA . A CA 203 1_555 H O HOH . A HOH 415 5_674 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc22 D CA CA . A CA 203 1_555 H O HOH . A HOH 422 5_674 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc23 E MG MG . A MG 204 1_555 H O HOH . A HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc24 E MG MG . A MG 204 1_555 H O HOH . A HOH 327 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc25 E MG MG . A MG 204 1_555 H O HOH . A HOH 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc26 E MG MG . A MG 204 1_555 H O HOH . A HOH 340 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc27 F CA CA . A CA 205 1_555 H O HOH . A HOH 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc28 F CA CA . A CA 205 1_555 H O HOH . A HOH 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc29 F CA CA . A CA 205 1_555 H O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc30 F CA CA . A CA 205 1_555 H O HOH . A HOH 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? metalc ? metalc31 G NA NA . A NA 206 1_555 H O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.872 ? metalc ? metalc32 G NA NA . A NA 206 1_555 H O HOH . A HOH 303 6_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.872 ? metalc ? metalc33 G NA NA . A NA 206 1_555 H O HOH . A HOH 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc34 G NA NA . A NA 206 1_555 H O HOH . A HOH 431 6_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8ELK _atom_sites.fract_transf_matrix[1][1] 0.011345 _atom_sites.fract_transf_matrix[1][2] 0.00655 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0131 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007504 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GNP A 1 201 528 GNP GNP . C 3 MG A 1 202 1 MG MG . D 4 CA A 1 203 1 CA CA . E 3 MG A 1 204 1 MG MG . F 4 CA A 1 205 1 CA CA . G 5 NA A 1 206 1 NA NA . H 6 HOH A 1 301 66 HOH HOH . H 6 HOH A 2 302 178 HOH HOH . H 6 HOH A 3 303 110 HOH HOH . H 6 HOH A 4 304 78 HOH HOH . H 6 HOH A 5 305 77 HOH HOH . H 6 HOH A 6 306 131 HOH HOH . H 6 HOH A 7 307 118 HOH HOH . H 6 HOH A 8 308 149 HOH HOH . H 6 HOH A 9 309 91 HOH HOH . H 6 HOH A 10 310 57 HOH HOH . H 6 HOH A 11 311 55 HOH HOH . H 6 HOH A 12 312 98 HOH HOH . H 6 HOH A 13 313 85 HOH HOH . H 6 HOH A 14 314 68 HOH HOH . H 6 HOH A 15 315 21 HOH HOH . H 6 HOH A 16 316 146 HOH HOH . H 6 HOH A 17 317 87 HOH HOH . H 6 HOH A 18 318 34 HOH HOH . H 6 HOH A 19 319 70 HOH HOH . H 6 HOH A 20 320 48 HOH HOH . H 6 HOH A 21 321 59 HOH HOH . H 6 HOH A 22 322 97 HOH HOH . H 6 HOH A 23 323 71 HOH HOH . H 6 HOH A 24 324 80 HOH HOH . H 6 HOH A 25 325 39 HOH HOH . H 6 HOH A 26 326 107 HOH HOH . H 6 HOH A 27 327 43 HOH HOH . H 6 HOH A 28 328 11 HOH HOH . H 6 HOH A 29 329 40 HOH HOH . H 6 HOH A 30 330 117 HOH HOH . H 6 HOH A 31 331 79 HOH HOH . H 6 HOH A 32 332 108 HOH HOH . H 6 HOH A 33 333 61 HOH HOH . H 6 HOH A 34 334 7 HOH HOH . H 6 HOH A 35 335 41 HOH HOH . H 6 HOH A 36 336 93 HOH HOH . H 6 HOH A 37 337 101 HOH HOH . H 6 HOH A 38 338 20 HOH HOH . H 6 HOH A 39 339 88 HOH HOH . H 6 HOH A 40 340 42 HOH HOH . H 6 HOH A 41 341 17 HOH HOH . H 6 HOH A 42 342 64 HOH HOH . H 6 HOH A 43 343 30 HOH HOH . H 6 HOH A 44 344 8 HOH HOH . H 6 HOH A 45 345 32 HOH HOH . H 6 HOH A 46 346 33 HOH HOH . H 6 HOH A 47 347 185 HOH HOH . H 6 HOH A 48 348 114 HOH HOH . H 6 HOH A 49 349 94 HOH HOH . H 6 HOH A 50 350 26 HOH HOH . H 6 HOH A 51 351 6 HOH HOH . H 6 HOH A 52 352 12 HOH HOH . H 6 HOH A 53 353 47 HOH HOH . H 6 HOH A 54 354 154 HOH HOH . H 6 HOH A 55 355 92 HOH HOH . H 6 HOH A 56 356 67 HOH HOH . H 6 HOH A 57 357 62 HOH HOH . H 6 HOH A 58 358 37 HOH HOH . H 6 HOH A 59 359 186 HOH HOH . H 6 HOH A 60 360 73 HOH HOH . H 6 HOH A 61 361 19 HOH HOH . H 6 HOH A 62 362 25 HOH HOH . H 6 HOH A 63 363 138 HOH HOH . H 6 HOH A 64 364 121 HOH HOH . H 6 HOH A 65 365 44 HOH HOH . H 6 HOH A 66 366 38 HOH HOH . H 6 HOH A 67 367 102 HOH HOH . H 6 HOH A 68 368 2 HOH HOH . H 6 HOH A 69 369 24 HOH HOH . H 6 HOH A 70 370 81 HOH HOH . H 6 HOH A 71 371 142 HOH HOH . H 6 HOH A 72 372 157 HOH HOH . H 6 HOH A 73 373 3 HOH HOH . H 6 HOH A 74 374 10 HOH HOH . H 6 HOH A 75 375 18 HOH HOH . H 6 HOH A 76 376 165 HOH HOH . H 6 HOH A 77 377 22 HOH HOH . H 6 HOH A 78 378 76 HOH HOH . H 6 HOH A 79 379 28 HOH HOH . H 6 HOH A 80 380 116 HOH HOH . H 6 HOH A 81 381 69 HOH HOH . H 6 HOH A 82 382 31 HOH HOH . H 6 HOH A 83 383 127 HOH HOH . H 6 HOH A 84 384 36 HOH HOH . H 6 HOH A 85 385 135 HOH HOH . H 6 HOH A 86 386 23 HOH HOH . H 6 HOH A 87 387 50 HOH HOH . H 6 HOH A 88 388 4 HOH HOH . H 6 HOH A 89 389 143 HOH HOH . H 6 HOH A 90 390 1 HOH HOH . H 6 HOH A 91 391 128 HOH HOH . H 6 HOH A 92 392 84 HOH HOH . H 6 HOH A 93 393 153 HOH HOH . H 6 HOH A 94 394 15 HOH HOH . H 6 HOH A 95 395 132 HOH HOH . H 6 HOH A 96 396 167 HOH HOH . H 6 HOH A 97 397 75 HOH HOH . H 6 HOH A 98 398 27 HOH HOH . H 6 HOH A 99 399 35 HOH HOH . H 6 HOH A 100 400 123 HOH HOH . H 6 HOH A 101 401 74 HOH HOH . H 6 HOH A 102 402 58 HOH HOH . H 6 HOH A 103 403 65 HOH HOH . H 6 HOH A 104 404 46 HOH HOH . H 6 HOH A 105 405 29 HOH HOH . H 6 HOH A 106 406 49 HOH HOH . H 6 HOH A 107 407 130 HOH HOH . H 6 HOH A 108 408 129 HOH HOH . H 6 HOH A 109 409 103 HOH HOH . H 6 HOH A 110 410 112 HOH HOH . H 6 HOH A 111 411 5 HOH HOH . H 6 HOH A 112 412 183 HOH HOH . H 6 HOH A 113 413 90 HOH HOH . H 6 HOH A 114 414 172 HOH HOH . H 6 HOH A 115 415 13 HOH HOH . H 6 HOH A 116 416 120 HOH HOH . H 6 HOH A 117 417 115 HOH HOH . H 6 HOH A 118 418 54 HOH HOH . H 6 HOH A 119 419 171 HOH HOH . H 6 HOH A 120 420 16 HOH HOH . H 6 HOH A 121 421 105 HOH HOH . H 6 HOH A 122 422 14 HOH HOH . H 6 HOH A 123 423 82 HOH HOH . H 6 HOH A 124 424 96 HOH HOH . H 6 HOH A 125 425 45 HOH HOH . H 6 HOH A 126 426 184 HOH HOH . H 6 HOH A 127 427 95 HOH HOH . H 6 HOH A 128 428 187 HOH HOH . H 6 HOH A 129 429 173 HOH HOH . H 6 HOH A 130 430 83 HOH HOH . H 6 HOH A 131 431 99 HOH HOH . H 6 HOH A 132 432 113 HOH HOH . H 6 HOH A 133 433 181 HOH HOH . H 6 HOH A 134 434 109 HOH HOH . H 6 HOH A 135 435 9 HOH HOH . H 6 HOH A 136 436 170 HOH HOH . H 6 HOH A 137 437 126 HOH HOH . H 6 HOH A 138 438 152 HOH HOH . H 6 HOH A 139 439 60 HOH HOH . H 6 HOH A 140 440 136 HOH HOH . H 6 HOH A 141 441 182 HOH HOH . H 6 HOH A 142 442 100 HOH HOH . H 6 HOH A 143 443 89 HOH HOH . H 6 HOH A 144 444 133 HOH HOH . H 6 HOH A 145 445 137 HOH HOH . H 6 HOH A 146 446 124 HOH HOH . H 6 HOH A 147 447 139 HOH HOH . H 6 HOH A 148 448 156 HOH HOH . H 6 HOH A 149 449 159 HOH HOH . H 6 HOH A 150 450 119 HOH HOH . H 6 HOH A 151 451 169 HOH HOH . H 6 HOH A 152 452 86 HOH HOH . H 6 HOH A 153 453 52 HOH HOH . H 6 HOH A 154 454 160 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x -33.642 _atom_site.Cartn_y 67.178 _atom_site.Cartn_z -74.381 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 205 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 685 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #