data_8ELV # _model_server_result.job_id RZ5aRkAWd1_sRejLYM6mOg _model_server_result.datetime_utc '2024-11-14 22:50:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8elv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 8ELV # _exptl.entry_id 8ELV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8ELV _cell.length_a 38.999 _cell.length_b 38.999 _cell.length_c 158.077 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ELV _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 17 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.885 ? metalc ? metalc2 A O ASN 26 A ASN 26 1_555 E CA CA . A CA 204 1_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc3 A OG1 THR 35 A THR 35 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc4 A O ARG 102 A ARG 102 1_555 D CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc5 A OD1 ASP 105 A ASP 105 1_555 D CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc6 A OD1 ASP 107 A ASP 107 1_555 E CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc7 A OD1 ASP 108 A ASP 108 1_555 E CA CA . A CA 204 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc8 B O2G GNP . A GNP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc9 B O2B GNP . A GNP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc10 C MG MG . A MG 202 1_555 F O HOH . A HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc11 C MG MG . A MG 202 1_555 F O HOH . A HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc12 D CA CA . A CA 203 1_555 F O HOH . A HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc13 D CA CA . A CA 203 1_555 F O HOH . A HOH 330 1_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc14 E CA CA . A CA 204 1_555 F O HOH . A HOH 351 1_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc15 E CA CA . A CA 204 1_555 F O HOH . A HOH 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.884 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8ELV _atom_sites.fract_transf_matrix[1][1] 0.025642 _atom_sites.fract_transf_matrix[1][2] 0.014804 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029608 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006326 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GNP A 1 201 167 GNP GNP . C 3 MG A 1 202 168 MG MG . D 4 CA A 1 203 242 CA CA . E 4 CA A 1 204 243 CA CA . F 5 HOH A 1 301 189 HOH HOH . F 5 HOH A 2 302 238 HOH HOH . F 5 HOH A 3 303 171 HOH HOH . F 5 HOH A 4 304 179 HOH HOH . F 5 HOH A 5 305 230 HOH HOH . F 5 HOH A 6 306 227 HOH HOH . F 5 HOH A 7 307 185 HOH HOH . F 5 HOH A 8 308 202 HOH HOH . F 5 HOH A 9 309 181 HOH HOH . F 5 HOH A 10 310 231 HOH HOH . F 5 HOH A 11 311 232 HOH HOH . F 5 HOH A 12 312 183 HOH HOH . F 5 HOH A 13 313 176 HOH HOH . F 5 HOH A 14 314 174 HOH HOH . F 5 HOH A 15 315 177 HOH HOH . F 5 HOH A 16 316 192 HOH HOH . F 5 HOH A 17 317 210 HOH HOH . F 5 HOH A 18 318 214 HOH HOH . F 5 HOH A 19 319 175 HOH HOH . F 5 HOH A 20 320 195 HOH HOH . F 5 HOH A 21 321 218 HOH HOH . F 5 HOH A 22 322 169 HOH HOH . F 5 HOH A 23 323 228 HOH HOH . F 5 HOH A 24 324 170 HOH HOH . F 5 HOH A 25 325 209 HOH HOH . F 5 HOH A 26 326 236 HOH HOH . F 5 HOH A 27 327 217 HOH HOH . F 5 HOH A 28 328 229 HOH HOH . F 5 HOH A 29 329 193 HOH HOH . F 5 HOH A 30 330 194 HOH HOH . F 5 HOH A 31 331 211 HOH HOH . F 5 HOH A 32 332 173 HOH HOH . F 5 HOH A 33 333 188 HOH HOH . F 5 HOH A 34 334 180 HOH HOH . F 5 HOH A 35 335 178 HOH HOH . F 5 HOH A 36 336 172 HOH HOH . F 5 HOH A 37 337 234 HOH HOH . F 5 HOH A 38 338 224 HOH HOH . F 5 HOH A 39 339 203 HOH HOH . F 5 HOH A 40 340 197 HOH HOH . F 5 HOH A 41 341 215 HOH HOH . F 5 HOH A 42 342 201 HOH HOH . F 5 HOH A 43 343 220 HOH HOH . F 5 HOH A 44 344 182 HOH HOH . F 5 HOH A 45 345 216 HOH HOH . F 5 HOH A 46 346 219 HOH HOH . F 5 HOH A 47 347 213 HOH HOH . F 5 HOH A 48 348 200 HOH HOH . F 5 HOH A 49 349 190 HOH HOH . F 5 HOH A 50 350 241 HOH HOH . F 5 HOH A 51 351 225 HOH HOH . F 5 HOH A 52 352 222 HOH HOH . F 5 HOH A 53 353 226 HOH HOH . F 5 HOH A 54 354 235 HOH HOH . F 5 HOH A 55 355 199 HOH HOH . F 5 HOH A 56 356 205 HOH HOH . F 5 HOH A 57 357 208 HOH HOH . F 5 HOH A 58 358 206 HOH HOH . F 5 HOH A 59 359 184 HOH HOH . F 5 HOH A 60 360 198 HOH HOH . F 5 HOH A 61 361 233 HOH HOH . F 5 HOH A 62 362 196 HOH HOH . F 5 HOH A 63 363 207 HOH HOH . F 5 HOH A 64 364 186 HOH HOH . F 5 HOH A 65 365 191 HOH HOH . F 5 HOH A 66 366 240 HOH HOH . F 5 HOH A 67 367 239 HOH HOH . F 5 HOH A 68 368 237 HOH HOH . F 5 HOH A 69 369 223 HOH HOH . F 5 HOH A 70 370 221 HOH HOH . F 5 HOH A 71 371 212 HOH HOH . F 5 HOH A 72 372 204 HOH HOH . F 5 HOH A 73 373 187 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x -3.355 _atom_site.Cartn_y 6.423 _atom_site.Cartn_z 5.905 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.25 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 204 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 222 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #