data_8ENI # _model_server_result.job_id zbI8sVDRwFa6aZTQz3i13g _model_server_result.datetime_utc '2024-10-19 21:46:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8eni # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8ENI # _exptl.entry_id 8ENI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 502.605 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[4-(5-fluoro-4-{5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentyl}-1H-1,2,3-triazol-1-yl)butyl]-5-methyl-1,3-benzoxazol-2(3H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ENI _cell.length_a 94.24 _cell.length_b 94.24 _cell.length_c 131.19 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ENI _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall 'P 4n 2n' _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_675 -x+1,-y+2,z -1 0 0 0 -1 0 0 0 1 94.24 188.48 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H31 F N6 O3 S' _chem_comp.formula_weight 502.605 _chem_comp.id WNE _chem_comp.mon_nstd_flag . _chem_comp.name 3-[4-(5-fluoro-4-{5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentyl}-1H-1,2,3-triazol-1-yl)butyl]-5-methyl-1,3-benzoxazol-2(3H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C10 WNE sing 376 n n C12 C13 WNE sing 377 n n F C11 WNE sing 378 n n C10 C11 WNE doub 379 n y C10 N3 WNE sing 380 n y C11 N1 WNE sing 381 n y N3 N2 WNE doub 382 n y N1 N2 WNE sing 383 n y N1 C9 WNE sing 384 n n C9 C8 WNE sing 385 n n C13 C14 WNE sing 386 n n C8 C7 WNE sing 387 n n C2 C3 WNE doub 388 n y C2 C1 WNE sing 389 n y C3 C4 WNE sing 390 n y C14 C15 WNE sing 391 n n C1 C WNE sing 392 n n C1 C23 WNE doub 393 n y C4 O WNE sing 394 n n C4 C22 WNE doub 395 n y O C5 WNE sing 396 n n C7 C6 WNE sing 397 n n C23 C22 WNE sing 398 n y C22 N WNE sing 399 n n C5 N WNE sing 400 n n C5 O1 WNE doub 401 n n N C6 WNE sing 402 n n C15 C16 WNE sing 403 n n C16 C17 WNE sing 404 n n C17 C21 WNE sing 405 n n C17 S WNE sing 406 n n C21 N5 WNE sing 407 n n C21 C19 WNE sing 408 n n N5 C20 WNE sing 409 n n S C18 WNE sing 410 n n C19 C18 WNE sing 411 n n C19 N4 WNE sing 412 n n C20 O2 WNE doub 413 n n C20 N4 WNE sing 414 n n C7 H8 WNE sing 415 n n C7 H7 WNE sing 416 n n C8 H10 WNE sing 417 n n C8 H9 WNE sing 418 n n C9 H12 WNE sing 419 n n C9 H11 WNE sing 420 n n C6 H5 WNE sing 421 n n C6 H6 WNE sing 422 n n C3 H4 WNE sing 423 n n C2 H3 WNE sing 424 n n N4 H27 WNE sing 425 n n C H WNE sing 426 n n C H1 WNE sing 427 n n C H2 WNE sing 428 n n C12 H13 WNE sing 429 n n C12 H14 WNE sing 430 n n C13 H16 WNE sing 431 n n C13 H15 WNE sing 432 n n C14 H17 WNE sing 433 n n C14 H18 WNE sing 434 n n C15 H20 WNE sing 435 n n C15 H19 WNE sing 436 n n C16 H22 WNE sing 437 n n C16 H21 WNE sing 438 n n C17 H23 WNE sing 439 n n C18 H24 WNE sing 440 n n C18 H25 WNE sing 441 n n C19 H26 WNE sing 442 n n C21 H29 WNE sing 443 n n C23 H30 WNE sing 444 n n N5 H28 WNE sing 445 n n # _atom_sites.entry_id 8ENI _atom_sites.fract_transf_matrix[1][1] 0.010611 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010611 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007623 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WNE A 1 401 1 WNE XXX . C 3 HOH A 1 501 44 HOH HOH . C 3 HOH A 2 502 54 HOH HOH . C 3 HOH A 3 503 1 HOH HOH . C 3 HOH A 4 504 48 HOH HOH . C 3 HOH A 5 505 5 HOH HOH . C 3 HOH A 6 506 39 HOH HOH . C 3 HOH A 7 507 22 HOH HOH . C 3 HOH A 8 508 19 HOH HOH . C 3 HOH A 9 509 24 HOH HOH . C 3 HOH A 10 510 37 HOH HOH . C 3 HOH A 11 511 49 HOH HOH . C 3 HOH A 12 512 7 HOH HOH . C 3 HOH A 13 513 16 HOH HOH . C 3 HOH A 14 514 9 HOH HOH . C 3 HOH A 15 515 28 HOH HOH . C 3 HOH A 16 516 3 HOH HOH . C 3 HOH A 17 517 20 HOH HOH . C 3 HOH A 18 518 6 HOH HOH . C 3 HOH A 19 519 2 HOH HOH . C 3 HOH A 20 520 23 HOH HOH . C 3 HOH A 21 521 53 HOH HOH . C 3 HOH A 22 522 46 HOH HOH . C 3 HOH A 23 523 10 HOH HOH . C 3 HOH A 24 524 38 HOH HOH . C 3 HOH A 25 525 4 HOH HOH . C 3 HOH A 26 526 27 HOH HOH . C 3 HOH A 27 527 35 HOH HOH . C 3 HOH A 28 528 21 HOH HOH . C 3 HOH A 29 529 17 HOH HOH . C 3 HOH A 30 530 15 HOH HOH . C 3 HOH A 31 531 13 HOH HOH . C 3 HOH A 32 532 12 HOH HOH . C 3 HOH A 33 533 30 HOH HOH . C 3 HOH A 34 534 26 HOH HOH . C 3 HOH A 35 535 25 HOH HOH . C 3 HOH A 36 536 8 HOH HOH . C 3 HOH A 37 537 51 HOH HOH . C 3 HOH A 38 538 11 HOH HOH . C 3 HOH A 39 539 29 HOH HOH . C 3 HOH A 40 540 14 HOH HOH . C 3 HOH A 41 541 40 HOH HOH . C 3 HOH A 42 542 36 HOH HOH . C 3 HOH A 43 543 34 HOH HOH . C 3 HOH A 44 544 52 HOH HOH . C 3 HOH A 45 545 31 HOH HOH . C 3 HOH A 46 546 43 HOH HOH . C 3 HOH A 47 547 50 HOH HOH . C 3 HOH A 48 548 33 HOH HOH . C 3 HOH A 49 549 47 HOH HOH . C 3 HOH A 50 550 32 HOH HOH . C 3 HOH A 51 551 18 HOH HOH . C 3 HOH A 52 552 45 HOH HOH . C 3 HOH A 53 553 42 HOH HOH . C 3 HOH A 54 554 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 WNE . . . B 2 28.076 100.695 18.192 1 76.7 ? N1 WNE 401 A 1 HETATM 2 C C7 WNE . . . B 2 25.938 102.082 20.726 1 83.17 ? C7 WNE 401 A 1 HETATM 3 C C8 WNE . . . B 2 25.914 101.122 19.498 1 78.99 ? C8 WNE 401 A 1 HETATM 4 N N2 WNE . . . B 2 29.364 101.117 18.246 1 70.26 ? N2 WNE 401 A 1 HETATM 5 C C9 WNE . . . B 2 26.894 101.552 18.343 1 77.72 ? C9 WNE 401 A 1 HETATM 6 O O1 WNE . . . B 2 23.274 104.035 21.302 1 94.77 ? O1 WNE 401 A 1 HETATM 7 C C1 WNE . . . B 2 21.966 98.564 20.409 1 74.45 ? C1 WNE 401 A 1 HETATM 8 C C5 WNE . . . B 2 22.876 102.945 21.07 1 91.67 ? C5 WNE 401 A 1 HETATM 9 C C6 WNE . . . B 2 24.863 101.73 21.809 1 86.83 ? C6 WNE 401 A 1 HETATM 10 N N3 WNE . . . B 2 30.156 100.051 18.043 1 71.7 ? N3 WNE 401 A 1 HETATM 11 C C4 WNE . . . B 2 21.603 101.314 20.43 1 80.43 ? C4 WNE 401 A 1 HETATM 12 C C3 WNE . . . B 2 20.591 100.544 19.961 1 74.76 ? C3 WNE 401 A 1 HETATM 13 C C2 WNE . . . B 2 20.763 99.161 19.946 1 72.51 ? C2 WNE 401 A 1 HETATM 14 N N4 WNE . . . B 2 33.037 95.085 25.96 1 43.39 ? N4 WNE 401 A 1 HETATM 15 N N WNE . . . B 2 23.486 101.821 21.251 1 88.08 ? N WNE 401 A 1 HETATM 16 C C WNE . . . B 2 22.217 97.051 20.412 1 72.08 ? C WNE 401 A 1 HETATM 17 O O WNE . . . B 2 21.677 102.675 20.548 1 89.28 ? O WNE 401 A 1 HETATM 18 C C10 WNE . . . B 2 29.425 98.987 17.845 1 66.78 ? C10 WNE 401 A 1 HETATM 19 C C11 WNE . . . B 2 28.101 99.388 17.949 1 78.57 ? C11 WNE 401 A 1 HETATM 20 C C12 WNE . . . B 2 30.014 97.587 17.63 1 62.07 ? C12 WNE 401 A 1 HETATM 21 C C13 WNE . . . B 2 30.845 97.215 18.902 1 60.84 ? C13 WNE 401 A 1 HETATM 22 C C14 WNE . . . B 2 30.013 97.331 20.217 1 61.58 ? C14 WNE 401 A 1 HETATM 23 C C15 WNE . . . B 2 30.747 96.799 21.498 1 64.73 ? C15 WNE 401 A 1 HETATM 24 C C16 WNE . . . B 2 30.388 95.327 21.8 1 52.09 ? C16 WNE 401 A 1 HETATM 25 C C17 WNE . . . B 2 30.961 94.599 23.086 1 50.49 ? C17 WNE 401 A 1 HETATM 26 C C18 WNE . . . B 2 31.127 93.719 25.391 1 45.67 ? C18 WNE 401 A 1 HETATM 27 C C19 WNE . . . B 2 32.559 94.201 24.95 1 46.39 ? C19 WNE 401 A 1 HETATM 28 C C20 WNE . . . B 2 33.096 96.437 25.363 1 43.68 ? C20 WNE 401 A 1 HETATM 29 C C21 WNE . . . B 2 32.404 94.948 23.623 1 49.59 ? C21 WNE 401 A 1 HETATM 30 C C22 WNE . . . B 2 22.774 100.792 20.892 1 81.41 ? C22 WNE 401 A 1 HETATM 31 C C23 WNE . . . B 2 22.96 99.437 20.877 1 78.95 ? C23 WNE 401 A 1 HETATM 32 F F WNE . . . B 2 27.016 98.574 17.815 1 84.49 ? F WNE 401 A 1 HETATM 33 N N5 WNE . . . B 2 32.693 96.322 23.937 1 44.2 ? N5 WNE 401 A 1 HETATM 34 O O2 WNE . . . B 2 33.411 97.419 25.909 1 41.42 ? O2 WNE 401 A 1 HETATM 35 S S WNE . . . B 2 29.983 94.839 24.571 1 44.65 ? S WNE 401 A 1 HETATM 36 H H8 WNE . . . B 2 25.791 103.107 20.376 1 99.8 ? H8 WNE 401 A 1 HETATM 37 H H7 WNE . . . B 2 26.945 102.064 21.157 1 99.8 ? H7 WNE 401 A 1 HETATM 38 H H10 WNE . . . B 2 26.109 100.108 19.854 1 94.79 ? H10 WNE 401 A 1 HETATM 39 H H9 WNE . . . B 2 24.897 101.074 19.113 1 94.79 ? H9 WNE 401 A 1 HETATM 40 H H12 WNE . . . B 2 26.416 101.563 17.361 1 93.26 ? H12 WNE 401 A 1 HETATM 41 H H11 WNE . . . B 2 27.212 102.583 18.504 1 93.26 ? H11 WNE 401 A 1 HETATM 42 H H5 WNE . . . B 2 24.954 102.389 22.677 1 104.19 ? H5 WNE 401 A 1 HETATM 43 H H6 WNE . . . B 2 25.073 100.733 22.202 1 104.19 ? H6 WNE 401 A 1 HETATM 44 H H4 WNE . . . B 2 19.673 101.011 19.61 1 89.71 ? H4 WNE 401 A 1 HETATM 45 H H3 WNE . . . B 2 19.968 98.533 19.575 1 87.01 ? H3 WNE 401 A 1 HETATM 46 H H27 WNE . . . B 2 33.221 94.871 26.925 1 52.07 ? H27 WNE 401 A 1 HETATM 47 H H WNE . . . B 2 21.4 96.499 19.984 1 86.5 ? H WNE 401 A 1 HETATM 48 H H1 WNE . . . B 2 22.346 96.708 21.432 1 86.5 ? H1 WNE 401 A 1 HETATM 49 H H2 WNE . . . B 2 23.109 96.82 19.836 1 86.5 ? H2 WNE 401 A 1 HETATM 50 H H13 WNE . . . B 2 30.626 97.585 16.725 1 74.48 ? H13 WNE 401 A 1 HETATM 51 H H14 WNE . . . B 2 29.208 96.872 17.479 1 74.48 ? H14 WNE 401 A 1 HETATM 52 H H16 WNE . . . B 2 31.731 97.852 18.977 1 73.01 ? H16 WNE 401 A 1 HETATM 53 H H15 WNE . . . B 2 31.235 96.199 18.825 1 73.01 ? H15 WNE 401 A 1 HETATM 54 H H17 WNE . . . B 2 29.092 96.771 20.061 1 73.89 ? H17 WNE 401 A 1 HETATM 55 H H18 WNE . . . B 2 29.704 98.366 20.392 1 73.89 ? H18 WNE 401 A 1 HETATM 56 H H20 WNE . . . B 2 30.519 97.391 22.394 1 77.68 ? H20 WNE 401 A 1 HETATM 57 H H19 WNE . . . B 2 31.822 96.899 21.341 1 77.68 ? H19 WNE 401 A 1 HETATM 58 H H22 WNE . . . B 2 30.658 94.762 20.895 1 62.51 ? H22 WNE 401 A 1 HETATM 59 H H21 WNE . . . B 2 29.298 95.251 21.86 1 62.51 ? H21 WNE 401 A 1 HETATM 60 H H23 WNE . . . B 2 30.896 93.543 22.895 1 60.59 ? H23 WNE 401 A 1 HETATM 61 H H24 WNE . . . B 2 30.923 92.704 25.062 1 54.8 ? H24 WNE 401 A 1 HETATM 62 H H25 WNE . . . B 2 30.936 93.729 26.46 1 54.8 ? H25 WNE 401 A 1 HETATM 63 H H26 WNE . . . B 2 33.258 93.358 24.872 1 55.67 ? H26 WNE 401 A 1 HETATM 64 H H29 WNE . . . B 2 33.141 94.646 22.87 1 59.51 ? H29 WNE 401 A 1 HETATM 65 H H30 WNE . . . B 2 23.897 99.032 21.237 1 94.74 ? H30 WNE 401 A 1 HETATM 66 H H28 WNE . . . B 2 32.699 97.11 23.327 1 53.04 ? H28 WNE 401 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 66 #