data_8EO2 # _model_server_result.job_id i4vOUnE_jeQGs-JEHe2nUg _model_server_result.datetime_utc '2025-02-18 21:07:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8eo2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":505}' # _entry.id 8EO2 # _exptl.entry_id 8EO2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 79.904 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BROMIDE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8EO2 _cell.length_a 64.48 _cell.length_b 71.31 _cell.length_c 167.32 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EO2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,I,M 1 1 B,D,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 H N N ? 6 I N N ? 6 K N N ? 6 L N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C NAG 1 C 1 NAG A 502 NAG 2 n C NAG 2 C 2 NAG A 503 NAG 2 n C BMA 3 C 3 BMA A 504 BMA 3 n D NAG 1 D 1 NAG B 277 NAG 3 n D NAG 2 D 2 NAG B 278 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 29 1_555 A SG CYS 37 A CYS 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? disulf ? disulf2 A SG CYS 55 A CYS 55 1_555 A SG CYS 114 A CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf3 A SG CYS 79 A CYS 79 1_555 A SG CYS 89 A CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf4 A SG CYS 235 A CYS 235 1_555 A SG CYS 242 A CYS 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf5 B SG CYS 29 B CYS 29 1_555 B SG CYS 37 B CYS 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 B SG CYS 55 B CYS 55 1_555 B SG CYS 114 B CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf7 B SG CYS 79 B CYS 79 1_555 B SG CYS 89 B CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf8 B SG CYS 235 B CYS 235 1_555 B SG CYS 242 B CYS 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? covale ? covale1 A ND2 ASN 40 A ASN 40 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.419 ? covale ? covale2 A ND2 ASN 239 A ASN 239 1_555 F C1 NAG . A NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale3 B ND2 ASN 40 B ASN 40 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 ? covale ? covale4 B ND2 ASN 239 B ASN 239 1_555 J C1 NAG . B NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale5 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale6 C O4 NAG . C NAG 2 1_555 C C1 BMA . C BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale7 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? # _chem_comp.formula 'Br -1' _chem_comp.formula_weight 79.904 _chem_comp.id BR _chem_comp.mon_nstd_flag . _chem_comp.name 'BROMIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8EO2 _atom_sites.fract_transf_matrix[1][1] 0.015509 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014023 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005977 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 GOL A 1 501 501 GOL GOL . F 5 NAG A 1 502 505 NAG NAG . G 6 BR A 1 503 1 BR BR . H 6 BR A 1 504 2 BR BR . I 6 BR A 1 505 3 BR BR . J 5 NAG B 1 301 276 NAG NAG . K 6 BR B 1 302 4 BR BR . L 6 BR B 1 303 5 BR BR . M 7 HOH A 1 601 83 HOH HOH . M 7 HOH A 2 602 14 HOH HOH . M 7 HOH A 3 603 143 HOH HOH . M 7 HOH A 4 604 149 HOH HOH . M 7 HOH A 5 605 139 HOH HOH . M 7 HOH A 6 606 147 HOH HOH . M 7 HOH A 7 607 65 HOH HOH . M 7 HOH A 8 608 97 HOH HOH . M 7 HOH A 9 609 108 HOH HOH . M 7 HOH A 10 610 105 HOH HOH . M 7 HOH A 11 611 5 HOH HOH . M 7 HOH A 12 612 85 HOH HOH . M 7 HOH A 13 613 32 HOH HOH . M 7 HOH A 14 614 136 HOH HOH . M 7 HOH A 15 615 86 HOH HOH . M 7 HOH A 16 616 1 HOH HOH . M 7 HOH A 17 617 114 HOH HOH . M 7 HOH A 18 618 29 HOH HOH . M 7 HOH A 19 619 104 HOH HOH . M 7 HOH A 20 620 22 HOH HOH . M 7 HOH A 21 621 4 HOH HOH . M 7 HOH A 22 622 140 HOH HOH . M 7 HOH A 23 623 73 HOH HOH . M 7 HOH A 24 624 10 HOH HOH . M 7 HOH A 25 625 71 HOH HOH . M 7 HOH A 26 626 42 HOH HOH . M 7 HOH A 27 627 3 HOH HOH . M 7 HOH A 28 628 34 HOH HOH . M 7 HOH A 29 629 98 HOH HOH . M 7 HOH A 30 630 127 HOH HOH . M 7 HOH A 31 631 11 HOH HOH . M 7 HOH A 32 632 19 HOH HOH . M 7 HOH A 33 633 112 HOH HOH . M 7 HOH A 34 634 45 HOH HOH . M 7 HOH A 35 635 52 HOH HOH . M 7 HOH A 36 636 88 HOH HOH . M 7 HOH A 37 637 50 HOH HOH . M 7 HOH A 38 638 2 HOH HOH . M 7 HOH A 39 639 21 HOH HOH . M 7 HOH A 40 640 78 HOH HOH . M 7 HOH A 41 641 49 HOH HOH . M 7 HOH A 42 642 141 HOH HOH . M 7 HOH A 43 643 27 HOH HOH . M 7 HOH A 44 644 61 HOH HOH . M 7 HOH A 45 645 69 HOH HOH . M 7 HOH A 46 646 12 HOH HOH . M 7 HOH A 47 647 81 HOH HOH . M 7 HOH A 48 648 53 HOH HOH . M 7 HOH A 49 649 62 HOH HOH . M 7 HOH A 50 650 87 HOH HOH . M 7 HOH A 51 651 75 HOH HOH . M 7 HOH A 52 652 35 HOH HOH . M 7 HOH A 53 653 115 HOH HOH . M 7 HOH A 54 654 76 HOH HOH . M 7 HOH A 55 655 121 HOH HOH . M 7 HOH A 56 656 133 HOH HOH . M 7 HOH A 57 657 77 HOH HOH . M 7 HOH A 58 658 92 HOH HOH . M 7 HOH A 59 659 90 HOH HOH . M 7 HOH A 60 660 40 HOH HOH . M 7 HOH A 61 661 110 HOH HOH . M 7 HOH A 62 662 102 HOH HOH . M 7 HOH A 63 663 93 HOH HOH . M 7 HOH A 64 664 134 HOH HOH . M 7 HOH A 65 665 70 HOH HOH . M 7 HOH A 66 666 111 HOH HOH . M 7 HOH A 67 667 120 HOH HOH . M 7 HOH A 68 668 63 HOH HOH . M 7 HOH A 69 669 106 HOH HOH . M 7 HOH A 70 670 20 HOH HOH . M 7 HOH A 71 671 130 HOH HOH . M 7 HOH A 72 672 89 HOH HOH . M 7 HOH A 73 673 91 HOH HOH . M 7 HOH A 74 674 109 HOH HOH . M 7 HOH A 75 675 113 HOH HOH . M 7 HOH A 76 676 94 HOH HOH . M 7 HOH A 77 677 128 HOH HOH . M 7 HOH A 78 678 44 HOH HOH . M 7 HOH A 79 679 146 HOH HOH . M 7 HOH A 80 680 80 HOH HOH . M 7 HOH A 81 681 145 HOH HOH . M 7 HOH A 82 682 100 HOH HOH . N 7 HOH B 1 401 82 HOH HOH . N 7 HOH B 2 402 43 HOH HOH . N 7 HOH B 3 403 123 HOH HOH . N 7 HOH B 4 404 66 HOH HOH . N 7 HOH B 5 405 30 HOH HOH . N 7 HOH B 6 406 9 HOH HOH . N 7 HOH B 7 407 125 HOH HOH . N 7 HOH B 8 408 13 HOH HOH . N 7 HOH B 9 409 99 HOH HOH . N 7 HOH B 10 410 48 HOH HOH . N 7 HOH B 11 411 64 HOH HOH . N 7 HOH B 12 412 38 HOH HOH . N 7 HOH B 13 413 59 HOH HOH . N 7 HOH B 14 414 142 HOH HOH . N 7 HOH B 15 415 57 HOH HOH . N 7 HOH B 16 416 60 HOH HOH . N 7 HOH B 17 417 144 HOH HOH . N 7 HOH B 18 418 39 HOH HOH . N 7 HOH B 19 419 37 HOH HOH . N 7 HOH B 20 420 6 HOH HOH . N 7 HOH B 21 421 15 HOH HOH . N 7 HOH B 22 422 23 HOH HOH . N 7 HOH B 23 423 18 HOH HOH . N 7 HOH B 24 424 16 HOH HOH . N 7 HOH B 25 425 7 HOH HOH . N 7 HOH B 26 426 129 HOH HOH . N 7 HOH B 27 427 41 HOH HOH . N 7 HOH B 28 428 138 HOH HOH . N 7 HOH B 29 429 96 HOH HOH . N 7 HOH B 30 430 31 HOH HOH . N 7 HOH B 31 431 28 HOH HOH . N 7 HOH B 32 432 17 HOH HOH . N 7 HOH B 33 433 68 HOH HOH . N 7 HOH B 34 434 51 HOH HOH . N 7 HOH B 35 435 56 HOH HOH . N 7 HOH B 36 436 26 HOH HOH . N 7 HOH B 37 437 36 HOH HOH . N 7 HOH B 38 438 101 HOH HOH . N 7 HOH B 39 439 8 HOH HOH . N 7 HOH B 40 440 117 HOH HOH . N 7 HOH B 41 441 122 HOH HOH . N 7 HOH B 42 442 137 HOH HOH . N 7 HOH B 43 443 148 HOH HOH . N 7 HOH B 44 444 95 HOH HOH . N 7 HOH B 45 445 54 HOH HOH . N 7 HOH B 46 446 72 HOH HOH . N 7 HOH B 47 447 67 HOH HOH . N 7 HOH B 48 448 24 HOH HOH . N 7 HOH B 49 449 58 HOH HOH . N 7 HOH B 50 450 103 HOH HOH . N 7 HOH B 51 451 119 HOH HOH . N 7 HOH B 52 452 25 HOH HOH . N 7 HOH B 53 453 46 HOH HOH . N 7 HOH B 54 454 55 HOH HOH . N 7 HOH B 55 455 131 HOH HOH . N 7 HOH B 56 456 135 HOH HOH . N 7 HOH B 57 457 132 HOH HOH . N 7 HOH B 58 458 118 HOH HOH . N 7 HOH B 59 459 33 HOH HOH . N 7 HOH B 60 460 74 HOH HOH . N 7 HOH B 61 461 79 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BR _atom_site.label_atom_id BR _atom_site.label_comp_id BR _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 6 _atom_site.Cartn_x -13.667 _atom_site.Cartn_y 7.917 _atom_site.Cartn_z -28.349 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 86.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id BR _atom_site.auth_comp_id BR _atom_site.auth_seq_id 505 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 414 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #