data_8ER7 # _model_server_result.job_id K1pEAL4lmrLe-dzdT-swhg _model_server_result.datetime_utc '2024-10-25 20:23:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8er7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":201}' # _entry.id 8ER7 # _exptl.entry_id 8ER7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 930.214 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3S,5R,6R,7E,9R,10R,12R,14S,15E,17E,19E,21S,23S,26R,27R,30R,34aS)-9,27-dihydroxy-3-{(2R)-1-[(1S,3R,4R)-4-hydroxy-3-methoxycyclohexyl]propan-2-yl}-5,10,21-trimethoxy-6,8,12,14,20,26-hexamethyl-5,6,9,10,12,13,14,21,22,23,24,25,26,27,32,33,34,34a-octadecahydro-3H-23,27-epoxypyrido[2,1-c][1,4]oxazacyclohentriacontine-1,11,28,29(4H,31H)-tetrone _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8ER7 _cell.length_a 125.08 _cell.length_b 125.08 _cell.length_c 253.415 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ER7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall 'P 64 2 (x,y,z+1/6)' _symmetry.space_group_name_H-M 'P 64 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,L,M 1 1 C,D,H,I,N 2 1 E,F,J,K 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 J N N # _chem_comp.formula 'C52 H83 N O13' _chem_comp.formula_weight 930.214 _chem_comp.id XZ3 _chem_comp.mon_nstd_flag . _chem_comp.name (3S,5R,6R,7E,9R,10R,12R,14S,15E,17E,19E,21S,23S,26R,27R,30R,34aS)-9,27-dihydroxy-3-{(2R)-1-[(1S,3R,4R)-4-hydroxy-3-methoxycyclohexyl]propan-2-yl}-5,10,21-trimethoxy-6,8,12,14,20,26-hexamethyl-5,6,9,10,12,13,14,21,22,23,24,25,26,27,32,33,34,34a-octadecahydro-3H-23,27-epoxypyrido[2,1-c][1,4]oxazacyclohentriacontine-1,11,28,29(4H,31H)-tetrone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O78 C79 XZ3 sing 376 n n O78 C54 XZ3 sing 377 n n C53 C52 XZ3 sing 378 n n C52 C54 XZ3 sing 379 n n C52 C51 XZ3 doub 380 e n O61 C60 XZ3 sing 381 n n C54 C56 XZ3 sing 382 n n C68 C67 XZ3 sing 383 n n C68 C69 XZ3 sing 384 n n O63 C62 XZ3 doub 385 n n C56 C57 XZ3 sing 386 n n C57 O59 XZ3 sing 387 n n C57 C77 XZ3 sing 388 n n O59 C60 XZ3 sing 389 n n C67 N66 XZ3 sing 390 n n C51 C50 XZ3 sing 391 n n C50 C49 XZ3 doub 392 e n C81 O80 XZ3 sing 393 n n C60 C62 XZ3 sing 394 n n C60 C73 XZ3 sing 395 n n C62 C64 XZ3 sing 396 n n C69 C70 XZ3 sing 397 n n O80 C23 XZ3 sing 398 n n C48 C49 XZ3 sing 399 n n C48 C47 XZ3 doub 400 e n C27 C25 XZ3 sing 401 n n N66 C64 XZ3 sing 402 n n N66 C71 XZ3 sing 403 n n C77 C76 XZ3 sing 404 n n C64 O65 XZ3 doub 405 n n C70 C71 XZ3 sing 406 n n C73 C76 XZ3 sing 407 n n C73 C75 XZ3 sing 408 n n C44 C47 XZ3 sing 409 n n C44 C46 XZ3 sing 410 n n C44 C43 XZ3 sing 411 n n C23 C25 XZ3 sing 412 n n C23 C22 XZ3 sing 413 n n C71 C2 XZ3 sing 414 n n C25 C28 XZ3 sing 415 n n C42 C40 XZ3 sing 416 n n O3 C2 XZ3 sing 417 n n O3 C4 XZ3 sing 418 n n C22 C4 XZ3 sing 419 n n C2 O1 XZ3 doub 420 n n C43 C40 XZ3 sing 421 n n C40 C38 XZ3 sing 422 n n C28 C29 XZ3 doub 423 e n C4 C6 XZ3 sing 424 n n C29 C30 XZ3 sing 425 n n C29 C31 XZ3 sing 426 n n C8 C6 XZ3 sing 427 n n C38 O39 XZ3 doub 428 n n C38 C34 XZ3 sing 429 n n C6 C9 XZ3 sing 430 n n C34 C31 XZ3 sing 431 n n C34 O36 XZ3 sing 432 n n C31 O33 XZ3 sing 433 n n C9 C10 XZ3 sing 434 n n C10 C21 XZ3 sing 435 n n C10 C12 XZ3 sing 436 n n O36 C37 XZ3 sing 437 n n C21 C20 XZ3 sing 438 n n C12 C13 XZ3 sing 439 n n C20 C17 XZ3 sing 440 n n C13 C17 XZ3 sing 441 n n C13 O15 XZ3 sing 442 n n C17 O19 XZ3 sing 443 n n C16 O15 XZ3 sing 444 n n C10 H1 XZ3 sing 445 n n C12 H2 XZ3 sing 446 n n C12 H3 XZ3 sing 447 n n C13 H4 XZ3 sing 448 n n C16 H5 XZ3 sing 449 n n C16 H6 XZ3 sing 450 n n C16 H7 XZ3 sing 451 n n C17 H8 XZ3 sing 452 n n C20 H9 XZ3 sing 453 n n C20 H10 XZ3 sing 454 n n C21 H11 XZ3 sing 455 n n C21 H12 XZ3 sing 456 n n C22 H13 XZ3 sing 457 n n C22 H14 XZ3 sing 458 n n C23 H15 XZ3 sing 459 n n C25 H16 XZ3 sing 460 n n C27 H17 XZ3 sing 461 n n C27 H18 XZ3 sing 462 n n C27 H19 XZ3 sing 463 n n C28 H20 XZ3 sing 464 n n C30 H21 XZ3 sing 465 n n C30 H22 XZ3 sing 466 n n C30 H23 XZ3 sing 467 n n C31 H24 XZ3 sing 468 n n C34 H25 XZ3 sing 469 n n C37 H26 XZ3 sing 470 n n C37 H27 XZ3 sing 471 n n C37 H28 XZ3 sing 472 n n C4 H29 XZ3 sing 473 n n C40 H30 XZ3 sing 474 n n C42 H31 XZ3 sing 475 n n C42 H32 XZ3 sing 476 n n C42 H33 XZ3 sing 477 n n C43 H34 XZ3 sing 478 n n C43 H35 XZ3 sing 479 n n C44 H36 XZ3 sing 480 n n C46 H37 XZ3 sing 481 n n C46 H38 XZ3 sing 482 n n C46 H39 XZ3 sing 483 n n C47 H40 XZ3 sing 484 n n C48 H41 XZ3 sing 485 n n C49 H42 XZ3 sing 486 n n C50 H43 XZ3 sing 487 n n C51 H44 XZ3 sing 488 n n C53 H45 XZ3 sing 489 n n C53 H46 XZ3 sing 490 n n C53 H47 XZ3 sing 491 n n C54 H48 XZ3 sing 492 n n C56 H49 XZ3 sing 493 n n C56 H50 XZ3 sing 494 n n C57 H51 XZ3 sing 495 n n C6 H52 XZ3 sing 496 n n C67 H53 XZ3 sing 497 n n C67 H54 XZ3 sing 498 n n C68 H55 XZ3 sing 499 n n C68 H56 XZ3 sing 500 n n C69 H57 XZ3 sing 501 n n C69 H58 XZ3 sing 502 n n C70 H59 XZ3 sing 503 n n C70 H60 XZ3 sing 504 n n C71 H61 XZ3 sing 505 n n C73 H62 XZ3 sing 506 n n C75 H63 XZ3 sing 507 n n C75 H64 XZ3 sing 508 n n C75 H65 XZ3 sing 509 n n C76 H66 XZ3 sing 510 n n C76 H67 XZ3 sing 511 n n C77 H68 XZ3 sing 512 n n C77 H69 XZ3 sing 513 n n C79 H70 XZ3 sing 514 n n C79 H71 XZ3 sing 515 n n C79 H72 XZ3 sing 516 n n C8 H73 XZ3 sing 517 n n C8 H74 XZ3 sing 518 n n C8 H75 XZ3 sing 519 n n C81 H76 XZ3 sing 520 n n C81 H77 XZ3 sing 521 n n C81 H78 XZ3 sing 522 n n C9 H79 XZ3 sing 523 n n C9 H80 XZ3 sing 524 n n O19 H81 XZ3 sing 525 n n O33 H82 XZ3 sing 526 n n O61 H83 XZ3 sing 527 n n # _atom_sites.entry_id 8ER7 _atom_sites.fract_transf_matrix[1][1] 0.007995 _atom_sites.fract_transf_matrix[1][2] 0.004616 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009232 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003946 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 XZ3 A 1 201 1 XZ3 RMC . H 3 XZ3 C 1 201 2 XZ3 RMC . I 4 CL D 1 2201 2 CL CL . J 3 XZ3 E 1 201 3 XZ3 RMC . K 4 CL F 1 2201 1 CL CL . L 5 HOH A 1 301 4 HOH HOH . M 5 HOH B 1 2201 1 HOH HOH . M 5 HOH B 2 2202 2 HOH HOH . N 5 HOH C 1 301 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 XZ3 . . . J 3 -62.57 60.799 -27.676 1 112.28 ? C10 XZ3 201 E 1 HETATM 2 C C12 XZ3 . . . J 3 -62.403 61.542 -29.017 1 114.36 ? C12 XZ3 201 E 1 HETATM 3 C C13 XZ3 . . . J 3 -62.144 63.042 -28.793 1 126.29 ? C13 XZ3 201 E 1 HETATM 4 C C16 XZ3 . . . J 3 -60.913 64.608 -30.199 1 124.77 ? C16 XZ3 201 E 1 HETATM 5 C C17 XZ3 . . . J 3 -63.316 63.654 -28.014 1 125.87 ? C17 XZ3 201 E 1 HETATM 6 C C2 XZ3 . . . J 3 -61.352 56.502 -30.991 1 121.61 ? C2 XZ3 201 E 1 HETATM 7 C C20 XZ3 . . . J 3 -63.389 62.988 -26.637 1 124.46 ? C20 XZ3 201 E 1 HETATM 8 C C21 XZ3 . . . J 3 -63.648 61.487 -26.813 1 118.07 ? C21 XZ3 201 E 1 HETATM 9 C C22 XZ3 . . . J 3 -63.096 56.099 -27.766 1 120.03 ? C22 XZ3 201 E 1 HETATM 10 C C23 XZ3 . . . J 3 -64.403 55.341 -28.042 1 116.83 ? C23 XZ3 201 E 1 HETATM 11 C C25 XZ3 . . . J 3 -65.527 55.6 -27.012 1 121.07 ? C25 XZ3 201 E 1 HETATM 12 C C27 XZ3 . . . J 3 -66.759 54.702 -27.247 1 116.35 ? C27 XZ3 201 E 1 HETATM 13 C C28 XZ3 . . . J 3 -66.081 57.014 -26.985 1 115.56 ? C28 XZ3 201 E 1 HETATM 14 C C29 XZ3 . . . J 3 -65.946 57.924 -26.032 1 113.33 ? C29 XZ3 201 E 1 HETATM 15 C C30 XZ3 . . . J 3 -65.117 57.705 -24.78 1 113.34 ? C30 XZ3 201 E 1 HETATM 16 C C31 XZ3 . . . J 3 -66.62 59.297 -26.128 1 111.92 ? C31 XZ3 201 E 1 HETATM 17 C C34 XZ3 . . . J 3 -67.81 59.379 -25.156 1 112.42 ? C34 XZ3 201 E 1 HETATM 18 C C37 XZ3 . . . J 3 -68.658 61.245 -23.817 1 120.33 ? C37 XZ3 201 E 1 HETATM 19 C C38 XZ3 . . . J 3 -69.041 58.567 -25.534 1 109.77 ? C38 XZ3 201 E 1 HETATM 20 C C4 XZ3 . . . J 3 -62.602 57.04 -28.901 1 116.05 ? C4 XZ3 201 E 1 HETATM 21 C C40 XZ3 . . . J 3 -69.219 57.112 -25.047 1 109.58 ? C40 XZ3 201 E 1 HETATM 22 C C42 XZ3 . . . J 3 -70.334 56.318 -25.791 1 110.92 ? C42 XZ3 201 E 1 HETATM 23 C C43 XZ3 . . . J 3 -69.481 57.059 -23.521 1 107.57 ? C43 XZ3 201 E 1 HETATM 24 C C44 XZ3 . . . J 3 -69.12 55.714 -22.852 1 109.61 ? C44 XZ3 201 E 1 HETATM 25 C C46 XZ3 . . . J 3 -69.572 55.707 -21.379 1 110.83 ? C46 XZ3 201 E 1 HETATM 26 C C47 XZ3 . . . J 3 -67.623 55.455 -22.912 1 113.7 ? C47 XZ3 201 E 1 HETATM 27 C C48 XZ3 . . . J 3 -67.126 54.28 -23.314 1 113.39 ? C48 XZ3 201 E 1 HETATM 28 C C49 XZ3 . . . J 3 -65.675 54.042 -23.388 1 115.51 ? C49 XZ3 201 E 1 HETATM 29 C C50 XZ3 . . . J 3 -65.217 53.086 -24.233 1 112.99 ? C50 XZ3 201 E 1 HETATM 30 C C51 XZ3 . . . J 3 -63.779 52.806 -24.384 1 120.32 ? C51 XZ3 201 E 1 HETATM 31 C C52 XZ3 . . . J 3 -63.235 51.884 -25.221 1 122.86 ? C52 XZ3 201 E 1 HETATM 32 C C53 XZ3 . . . J 3 -64.129 51.024 -26.103 1 125.4 ? C53 XZ3 201 E 1 HETATM 33 C C54 XZ3 . . . J 3 -61.721 51.779 -25.241 1 123.93 ? C54 XZ3 201 E 1 HETATM 34 C C56 XZ3 . . . J 3 -61.147 52.942 -26.062 1 125.9 ? C56 XZ3 201 E 1 HETATM 35 C C57 XZ3 . . . J 3 -59.628 52.884 -26.335 1 132.95 ? C57 XZ3 201 E 1 HETATM 36 C C6 XZ3 . . . J 3 -61.947 58.363 -28.408 1 111.16 ? C6 XZ3 201 E 1 HETATM 37 C C60 XZ3 . . . J 3 -58.085 52.918 -28.292 1 133.93 ? C60 XZ3 201 E 1 HETATM 38 C C62 XZ3 . . . J 3 -58.173 53.043 -29.791 1 135.79 ? C62 XZ3 201 E 1 HETATM 39 C C64 XZ3 . . . J 3 -58.701 54.207 -30.556 1 128.86 ? C64 XZ3 201 E 1 HETATM 40 C C67 XZ3 . . . J 3 -61.006 53.261 -30.711 1 120.04 ? C67 XZ3 201 E 1 HETATM 41 C C68 XZ3 . . . J 3 -61.793 52.845 -31.962 1 115.7 ? C68 XZ3 201 E 1 HETATM 42 C C69 XZ3 . . . J 3 -62.368 54.042 -32.7 1 112.06 ? C69 XZ3 201 E 1 HETATM 43 C C70 XZ3 . . . J 3 -61.267 55.036 -33.036 1 116.4 ? C70 XZ3 201 E 1 HETATM 44 C C71 XZ3 . . . J 3 -60.495 55.52 -31.783 1 119.85 ? C71 XZ3 201 E 1 HETATM 45 C C73 XZ3 . . . J 3 -57.324 54.122 -27.67 1 141.04 ? C73 XZ3 201 E 1 HETATM 46 C C75 XZ3 . . . J 3 -55.826 54.152 -28.029 1 145.78 ? C75 XZ3 201 E 1 HETATM 47 C C76 XZ3 . . . J 3 -57.437 54.099 -26.138 1 148.12 ? C76 XZ3 201 E 1 HETATM 48 C C77 XZ3 . . . J 3 -58.907 54.085 -25.692 1 142.87 ? C77 XZ3 201 E 1 HETATM 49 C C79 XZ3 . . . J 3 -61.243 49.412 -24.867 1 122.1 ? C79 XZ3 201 E 1 HETATM 50 C C8 XZ3 . . . J 3 -60.866 58.108 -27.34 1 109.54 ? C8 XZ3 201 E 1 HETATM 51 C C81 XZ3 . . . J 3 -64.33 53.124 -29.134 1 115.85 ? C81 XZ3 201 E 1 HETATM 52 C C9 XZ3 . . . J 3 -63.026 59.341 -27.885 1 111.21 ? C9 XZ3 201 E 1 HETATM 53 N N66 XZ3 . . . J 3 -59.993 54.337 -31.007 1 117.29 ? N66 XZ3 201 E 1 HETATM 54 O O1 XZ3 . . . J 3 -61.758 57.493 -31.559 1 119.66 ? O1 XZ3 201 E 1 HETATM 55 O O15 XZ3 . . . J 3 -62.012 63.699 -30.061 1 132.64 ? O15 XZ3 201 E 1 HETATM 56 O O19 XZ3 . . . J 3 -63.131 65.062 -27.851 1 132.12 ? O19 XZ3 201 E 1 HETATM 57 O O3 XZ3 . . . J 3 -61.625 56.281 -29.687 1 124.3 ? O3 XZ3 201 E 1 HETATM 58 O O33 XZ3 . . . J 3 -67.028 59.687 -27.441 1 109.95 ? O33 XZ3 201 E 1 HETATM 59 O O36 XZ3 . . . J 3 -68.146 60.777 -25.07 1 116.69 ? O36 XZ3 201 E 1 HETATM 60 O O39 XZ3 . . . J 3 -69.881 59.105 -26.221 1 105.35 ? O39 XZ3 201 E 1 HETATM 61 O O59 XZ3 . . . J 3 -59.415 52.88 -27.762 1 130.4 ? O59 XZ3 201 E 1 HETATM 62 O O61 XZ3 . . . J 3 -57.435 51.691 -27.905 1 134.33 ? O61 XZ3 201 E 1 HETATM 63 O O63 XZ3 . . . J 3 -57.821 52.105 -30.474 1 137.66 ? O63 XZ3 201 E 1 HETATM 64 O O65 XZ3 . . . J 3 -57.873 55.073 -30.78 1 128 ? O65 XZ3 201 E 1 HETATM 65 O O78 XZ3 . . . J 3 -61.269 50.517 -25.775 1 119.93 ? O78 XZ3 201 E 1 HETATM 66 O O80 XZ3 . . . J 3 -64.084 53.938 -27.984 1 119.23 ? O80 XZ3 201 E 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 66 #