data_8ERA
#
_model_server_result.job_id            YdpisHjjfdVKtbg7jrdudA 
_model_server_result.datetime_utc      '2024-12-26 23:50:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8era 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":201}' 
#
_entry.id    8ERA 
#
_exptl.entry_id    8ERA 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              916.188 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (3S,5R,6R,7E,9R,10R,12R,14S,15E,17E,19E,21S,23S,26R,27R,30R,34aS)-5,9,27-trihydroxy-3-{(2R)-1-[(1S,3R,4R)-4-hydroxy-3-methoxycyclohexyl]propan-2-yl}-10,21-dimethoxy-6,8,12,14,20,26-hexamethyl-5,6,9,10,12,13,14,21,22,23,24,25,26,27,32,33,34,34a-octadecahydro-3H-23,27-epoxypyrido[2,1-c][1,4]oxazacyclohentriacontine-1,11,28,29(4H,31H)-tetrone 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               'Entity 5 XZ9 and Entity 6 XYU are connected by an unmodeled PEG linker.' 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8ERA 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ERA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C51 H81 N O13' 
_chem_comp.formula_weight    916.188 
_chem_comp.id                XYU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (3S,5R,6R,7E,9R,10R,12R,14S,15E,17E,19E,21S,23S,26R,27R,30R,34aS)-5,9,27-trihydroxy-3-{(2R)-1-[(1S,3R,4R)-4-hydroxy-3-methoxycyclohexyl]propan-2-yl}-10,21-dimethoxy-6,8,12,14,20,26-hexamethyl-5,6,9,10,12,13,14,21,22,23,24,25,26,27,32,33,34,34a-octadecahydro-3H-23,27-epoxypyrido[2,1-c][1,4]oxazacyclohentriacontine-1,11,28,29(4H,31H)-tetrone 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C79 O78 XYU sing 374 n n 
O78 C54 XYU sing 375 n n 
C53 C52 XYU sing 376 n n 
C52 C54 XYU sing 377 n n 
C52 C51 XYU doub 378 e n 
C54 C56 XYU sing 379 n n 
C68 C67 XYU sing 380 n n 
C68 C69 XYU sing 381 n n 
O63 C62 XYU doub 382 n n 
O61 C60 XYU sing 383 n n 
C56 C57 XYU sing 384 n n 
C51 C50 XYU sing 385 n n 
C50 C49 XYU doub 386 e n 
C67 N66 XYU sing 387 n n 
C57 O59 XYU sing 388 n n 
C57 C77 XYU sing 389 n n 
O59 C60 XYU sing 390 n n 
C69 C70 XYU sing 391 n n 
C62 C60 XYU sing 392 n n 
C62 C64 XYU sing 393 n n 
C60 C73 XYU sing 394 n n 
C27 C25 XYU sing 395 n n 
O80 C23 XYU sing 396 n n 
C49 C48 XYU sing 397 n n 
C48 C47 XYU doub 398 e n 
N66 C64 XYU sing 399 n n 
N66 C71 XYU sing 400 n n 
C64 O65 XYU doub 401 n n 
C77 C76 XYU sing 402 n n 
C70 C71 XYU sing 403 n n 
C47 C44 XYU sing 404 n n 
C44 C46 XYU sing 405 n n 
C44 C43 XYU sing 406 n n 
C42 C40 XYU sing 407 n n 
C25 C23 XYU sing 408 n n 
C25 C28 XYU sing 409 n n 
C73 C76 XYU sing 410 n n 
C73 C75 XYU sing 411 n n 
C23 C22 XYU sing 412 n n 
C71 C2 XYU sing 413 n n 
O3 C2 XYU sing 414 n n 
O3 C4 XYU sing 415 n n 
C43 C40 XYU sing 416 n n 
C40 C38 XYU sing 417 n n 
C22 C4 XYU sing 418 n n 
C2 O1 XYU doub 419 n n 
C28 C29 XYU doub 420 e n 
C4 C6 XYU sing 421 n n 
C30 C29 XYU sing 422 n n 
C29 C31 XYU sing 423 n n 
C38 O39 XYU doub 424 n n 
C38 C34 XYU sing 425 n n 
C8 C6 XYU sing 426 n n 
C6 C9 XYU sing 427 n n 
C34 C31 XYU sing 428 n n 
C34 O36 XYU sing 429 n n 
C31 O33 XYU sing 430 n n 
C9 C10 XYU sing 431 n n 
O36 C37 XYU sing 432 n n 
C10 C21 XYU sing 433 n n 
C10 C12 XYU sing 434 n n 
C21 C20 XYU sing 435 n n 
C12 C13 XYU sing 436 n n 
C20 C17 XYU sing 437 n n 
C13 C17 XYU sing 438 n n 
C13 O15 XYU sing 439 n n 
C17 O19 XYU sing 440 n n 
C16 O15 XYU sing 441 n n 
C10 H1 XYU sing 442 n n 
C12 H2 XYU sing 443 n n 
C12 H3 XYU sing 444 n n 
C13 H4 XYU sing 445 n n 
C16 H5 XYU sing 446 n n 
C16 H6 XYU sing 447 n n 
C16 H7 XYU sing 448 n n 
C17 H8 XYU sing 449 n n 
C20 H9 XYU sing 450 n n 
C20 H10 XYU sing 451 n n 
C21 H11 XYU sing 452 n n 
C21 H12 XYU sing 453 n n 
C22 H13 XYU sing 454 n n 
C22 H14 XYU sing 455 n n 
C23 H15 XYU sing 456 n n 
C25 H16 XYU sing 457 n n 
C27 H17 XYU sing 458 n n 
C27 H18 XYU sing 459 n n 
C27 H19 XYU sing 460 n n 
C28 H20 XYU sing 461 n n 
C30 H21 XYU sing 462 n n 
C30 H22 XYU sing 463 n n 
C30 H23 XYU sing 464 n n 
C31 H24 XYU sing 465 n n 
C34 H25 XYU sing 466 n n 
C37 H26 XYU sing 467 n n 
C37 H27 XYU sing 468 n n 
C37 H28 XYU sing 469 n n 
C4 H29 XYU sing 470 n n 
C40 H30 XYU sing 471 n n 
C42 H31 XYU sing 472 n n 
C42 H32 XYU sing 473 n n 
C42 H33 XYU sing 474 n n 
C43 H34 XYU sing 475 n n 
C43 H35 XYU sing 476 n n 
C44 H36 XYU sing 477 n n 
C46 H37 XYU sing 478 n n 
C46 H38 XYU sing 479 n n 
C46 H39 XYU sing 480 n n 
C47 H40 XYU sing 481 n n 
C48 H41 XYU sing 482 n n 
C49 H42 XYU sing 483 n n 
C50 H43 XYU sing 484 n n 
C51 H44 XYU sing 485 n n 
C53 H45 XYU sing 486 n n 
C53 H46 XYU sing 487 n n 
C53 H47 XYU sing 488 n n 
C54 H48 XYU sing 489 n n 
C56 H49 XYU sing 490 n n 
C56 H50 XYU sing 491 n n 
C57 H51 XYU sing 492 n n 
C6 H52 XYU sing 493 n n 
C67 H53 XYU sing 494 n n 
C67 H54 XYU sing 495 n n 
C68 H55 XYU sing 496 n n 
C68 H56 XYU sing 497 n n 
C69 H57 XYU sing 498 n n 
C69 H58 XYU sing 499 n n 
C70 H59 XYU sing 500 n n 
C70 H60 XYU sing 501 n n 
C71 H61 XYU sing 502 n n 
C73 H62 XYU sing 503 n n 
C75 H63 XYU sing 504 n n 
C75 H64 XYU sing 505 n n 
C75 H65 XYU sing 506 n n 
C76 H66 XYU sing 507 n n 
C76 H67 XYU sing 508 n n 
C77 H68 XYU sing 509 n n 
C77 H69 XYU sing 510 n n 
C79 H70 XYU sing 511 n n 
C79 H71 XYU sing 512 n n 
C79 H72 XYU sing 513 n n 
C8 H73 XYU sing 514 n n 
C8 H74 XYU sing 515 n n 
C8 H75 XYU sing 516 n n 
C9 H76 XYU sing 517 n n 
C9 H77 XYU sing 518 n n 
O19 H78 XYU sing 519 n n 
O33 H79 XYU sing 520 n n 
O61 H80 XYU sing 521 n n 
O80 H81 XYU sing 522 n n 
#
_atom_sites.entry_id                     8ERA 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 XZ9 A 1 2601 2601 XZ9 RMC . 
F 6 XYU B 1 201 201 XYU RML . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 XYU . . . F 6 210.673 228.717 238.654 1 252.69 ? C10 XYU 201 B 1 
HETATM 2 C C12 XYU . . . F 6 209.511 227.869 239.193 1 252.36 ? C12 XYU 201 B 1 
HETATM 3 C C13 XYU . . . F 6 208.356 227.877 238.19 1 252.85 ? C13 XYU 201 B 1 
HETATM 4 C C16 XYU . . . F 6 207.33 225.683 238.277 1 253.77 ? C16 XYU 201 B 1 
HETATM 5 C C17 XYU . . . F 6 207.844 229.31 238 1 252.44 ? C17 XYU 201 B 1 
HETATM 6 C C2 XYU . . . F 6 214.711 231.439 237.717 1 254.87 ? C2 XYU 201 B 1 
HETATM 7 C C20 XYU . . . F 6 208.984 230.233 237.529 1 253.03 ? C20 XYU 201 B 1 
HETATM 8 C C21 XYU . . . F 6 210.201 230.171 238.472 1 253.02 ? C21 XYU 201 B 1 
HETATM 9 C C22 XYU . . . F 6 214.412 227.829 237.839 1 253.1 ? C22 XYU 201 B 1 
HETATM 10 C C23 XYU . . . F 6 214.826 227.55 236.395 1 253.76 ? C23 XYU 201 B 1 
HETATM 11 C C25 XYU . . . F 6 214.541 226.094 235.941 1 253.45 ? C25 XYU 201 B 1 
HETATM 12 C C27 XYU . . . F 6 215.23 225.753 234.606 1 253.09 ? C27 XYU 201 B 1 
HETATM 13 C C28 XYU . . . F 6 213.045 225.847 235.807 1 253.32 ? C28 XYU 201 B 1 
HETATM 14 C C29 XYU . . . F 6 212.238 225.165 236.624 1 253.35 ? C29 XYU 201 B 1 
HETATM 15 C C30 XYU . . . F 6 212.684 224.449 237.887 1 253.39 ? C30 XYU 201 B 1 
HETATM 16 C C31 XYU . . . F 6 210.741 225.013 236.351 1 253.42 ? C31 XYU 201 B 1 
HETATM 17 C C34 XYU . . . F 6 210.357 223.611 235.883 1 252.74 ? C34 XYU 201 B 1 
HETATM 18 C C37 XYU . . . F 6 208.303 222.318 236.236 1 253.04 ? C37 XYU 201 B 1 
HETATM 19 C C38 XYU . . . F 6 210.826 223.201 234.502 1 252.37 ? C38 XYU 201 B 1 
HETATM 20 C C4 XYU . . . F 6 213.767 229.203 238.064 1 253.34 ? C4 XYU 201 B 1 
HETATM 21 C C40 XYU . . . F 6 212.224 222.609 234.31 1 251.72 ? C40 XYU 201 B 1 
HETATM 22 C C42 XYU . . . F 6 212.81 222.818 232.885 1 252.47 ? C42 XYU 201 B 1 
HETATM 23 C C43 XYU . . . F 6 212.177 221.114 234.674 1 251.43 ? C43 XYU 201 B 1 
HETATM 24 C C44 XYU . . . F 6 213.51 220.444 235.077 1 251.82 ? C44 XYU 201 B 1 
HETATM 25 C C46 XYU . . . F 6 213.233 218.956 235.384 1 251.97 ? C46 XYU 201 B 1 
HETATM 26 C C47 XYU . . . F 6 214.182 221.084 236.286 1 252.01 ? C47 XYU 201 B 1 
HETATM 27 C C48 XYU . . . F 6 215.129 222.002 236.155 1 252.02 ? C48 XYU 201 B 1 
HETATM 28 C C49 XYU . . . F 6 215.74 222.641 237.327 1 252.41 ? C49 XYU 201 B 1 
HETATM 29 C C50 XYU . . . F 6 216.798 223.453 237.151 1 252.63 ? C50 XYU 201 B 1 
HETATM 30 C C51 XYU . . . F 6 217.384 224.161 238.291 1 253.35 ? C51 XYU 201 B 1 
HETATM 31 C C52 XYU . . . F 6 218.364 225.087 238.178 1 253.25 ? C52 XYU 201 B 1 
HETATM 32 C C53 XYU . . . F 6 218.969 225.422 236.825 1 253.15 ? C53 XYU 201 B 1 
HETATM 33 C C54 XYU . . . F 6 218.895 225.779 239.416 1 252.98 ? C54 XYU 201 B 1 
HETATM 34 C C56 XYU . . . F 6 218.534 227.249 239.359 1 253.05 ? C56 XYU 201 B 1 
HETATM 35 C C57 XYU . . . F 6 218.815 228.022 240.643 1 253.67 ? C57 XYU 201 B 1 
HETATM 36 C C6 XYU . . . F 6 213.082 229.395 239.445 1 252.54 ? C6 XYU 201 B 1 
HETATM 37 C C60 XYU . . . F 6 218.877 230.453 241.113 1 255.35 ? C60 XYU 201 B 1 
HETATM 38 C C62 XYU . . . F 6 218.797 231.669 240.247 1 255.32 ? C62 XYU 201 B 1 
HETATM 39 C C64 XYU . . . F 6 217.568 232.165 239.603 1 254.29 ? C64 XYU 201 B 1 
HETATM 40 C C67 XYU . . . F 6 217.965 230.87 237.504 1 253.28 ? C67 XYU 201 B 1 
HETATM 41 C C68 XYU . . . F 6 218.18 231.425 236.097 1 252.84 ? C68 XYU 201 B 1 
HETATM 42 C C69 XYU . . . F 6 216.851 231.787 235.455 1 253.37 ? C69 XYU 201 B 1 
HETATM 43 C C70 XYU . . . F 6 216.151 232.832 236.303 1 253.55 ? C70 XYU 201 B 1 
HETATM 44 C C71 XYU . . . F 6 215.892 232.368 237.743 1 253.98 ? C71 XYU 201 B 1 
HETATM 45 C C73 XYU . . . F 6 217.719 230.299 242.12 1 254.49 ? C73 XYU 201 B 1 
HETATM 46 C C75 XYU . . . F 6 217.768 231.364 243.226 1 253.67 ? C75 XYU 201 B 1 
HETATM 47 C C76 XYU . . . F 6 217.761 228.898 242.76 1 253.68 ? C76 XYU 201 B 1 
HETATM 48 C C77 XYU . . . F 6 217.74 227.772 241.714 1 253.13 ? C77 XYU 201 B 1 
HETATM 49 C C79 XYU . . . F 6 220.833 224.342 239.621 1 252.38 ? C79 XYU 201 B 1 
HETATM 50 C C8 XYU . . . F 6 214.016 229.034 240.612 1 252.47 ? C8 XYU 201 B 1 
HETATM 51 C C9 XYU . . . F 6 211.819 228.549 239.656 1 252.12 ? C9 XYU 201 B 1 
HETATM 52 N N66 XYU . . . F 6 217.151 231.82 238.348 1 253.79 ? N66 XYU 201 B 1 
HETATM 53 O O1 XYU . . . F 6 213.628 231.919 237.48 1 255.61 ? O1 XYU 201 B 1 
HETATM 54 O O15 XYU . . . F 6 207.296 227.056 238.69 1 253.34 ? O15 XYU 201 B 1 
HETATM 55 O O19 XYU . . . F 6 206.81 229.286 237.015 1 252.28 ? O19 XYU 201 B 1 
HETATM 56 O O3 XYU . . . F 6 214.879 230.132 237.945 1 254.5 ? O3 XYU 201 B 1 
HETATM 57 O O33 XYU . . . F 6 210.22 225.98 235.454 1 253.24 ? O33 XYU 201 B 1 
HETATM 58 O O36 XYU . . . F 6 208.917 223.58 235.957 1 253.34 ? O36 XYU 201 B 1 
HETATM 59 O O39 XYU . . . F 6 210.068 223.298 233.57 1 253.36 ? O39 XYU 201 B 1 
HETATM 60 O O59 XYU . . . F 6 218.798 229.376 240.199 1 255.38 ? O59 XYU 201 B 1 
HETATM 61 O O61 XYU . . . F 6 220.129 230.381 241.805 1 254.95 ? O61 XYU 201 B 1 
HETATM 62 O O63 XYU . . . F 6 219.813 232.261 239.958 1 255.72 ? O63 XYU 201 B 1 
HETATM 63 O O65 XYU . . . F 6 216.931 232.926 240.301 1 253.99 ? O65 XYU 201 B 1 
HETATM 64 O O78 XYU . . . F 6 220.33 225.679 239.496 1 253.04 ? O78 XYU 201 B 1 
HETATM 65 O O80 XYU . . . F 6 216.227 227.866 236.305 1 253.77 ? O80 XYU 201 B 1 
#
_model_server_stats.io_time_ms              100 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           65 
#