data_8ERP
#
_model_server_result.job_id            CbQmK03L3DLgK-lxvijSNw 
_model_server_result.datetime_utc      '2025-04-08 19:11:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8erp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":511}' 
#
_entry.id    8ERP 
#
_exptl.entry_id    8ERP 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine 
_entity.pdbx_number_of_molecules    20 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8ERP 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ERP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 T N N 
? 3 U N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
? 3 AA N N 
? 3 BA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 111 B ASP 111 1_555 C MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc2 A OD1 ASP 111 B ASP 111 1_555 D MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? 
metalc ? metalc3 A OD1 ASP 132 B ASP 132 1_555 C MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc4 A OD2 ASP 132 B ASP 132 1_555 D MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc5 A OD1 ASP 136 B ASP 136 1_555 C MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
metalc ? metalc6 A OD2 ASP 136 B ASP 136 1_555 C MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? 
metalc ? metalc7 D MG MG . B MG 502 1_555 G O2A CDC . B CDC 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc8 D MG MG . B MG 502 1_555 G O3B CDC . B CDC 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
metalc ? metalc9 B OD1 ASP 111 A ASP 111 1_555 R MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc10 B OD1 ASP 111 A ASP 111 1_555 S MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? 
metalc ? metalc11 B OD1 ASP 132 A ASP 132 1_555 R MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc12 B OD2 ASP 132 A ASP 132 1_555 S MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc13 B OD1 ASP 136 A ASP 136 1_555 R MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
metalc ? metalc14 B OD2 ASP 136 A ASP 136 1_555 R MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? 
metalc ? metalc15 S MG MG . A MG 504 1_555 V O2A CDC . A CDC 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc16 S MG MG . A MG 504 1_555 V O3B CDC . A CDC 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                LBN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '(2R)-2-[(9Z)-9-Octadecenoyloxy]-3-(palmitoyloxy)propyl 2-(trimethylammonio)ethyl phosphate' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 N1 LBN sing 229 n n 
O3 P1 LBN sing 230 n n 
O2 C9 LBN sing 231 n n 
O2 P1 LBN sing 232 n n 
C9 C6 LBN sing 233 n n 
O4 P1 LBN doub 234 n n 
P1 O1 LBN sing 235 n n 
C6 N1 LBN sing 236 n n 
N1 C15 LBN sing 237 n n 
N1 C18 LBN sing 238 n n 
O1 C1 LBN sing 239 n n 
C2 C1 LBN sing 240 n n 
C2 C3 LBN sing 241 n n 
C2 O7 LBN sing 242 n n 
C3 O5 LBN sing 243 n n 
O6 C25 LBN doub 244 n n 
O5 C25 LBN sing 245 n n 
O7 C34 LBN sing 246 n n 
C25 C26 LBN sing 247 n n 
C34 C35 LBN sing 248 n n 
C34 O8 LBN doub 249 n n 
C26 C27 LBN sing 250 n n 
C35 C36 LBN sing 251 n n 
C27 C28 LBN sing 252 n n 
C36 C37 LBN sing 253 n n 
C28 C29 LBN sing 254 n n 
C37 C38 LBN sing 255 n n 
C29 C30 LBN sing 256 n n 
C39 C38 LBN sing 257 n n 
C39 C40 LBN sing 258 n n 
C41 C40 LBN sing 259 n n 
C41 C42 LBN sing 260 n n 
C30 C31 LBN sing 261 n n 
C42 C5 LBN doub 262 z n 
C31 C32 LBN sing 263 n n 
C5 C8 LBN sing 264 n n 
C8 C11 LBN sing 265 n n 
C32 C33 LBN sing 266 n n 
C11 C14 LBN sing 267 n n 
C33 C4 LBN sing 268 n n 
C14 C17 LBN sing 269 n n 
C4 C7 LBN sing 270 n n 
C17 C20 LBN sing 271 n n 
C7 C10 LBN sing 272 n n 
C20 C22 LBN sing 273 n n 
C10 C13 LBN sing 274 n n 
C22 C23 LBN sing 275 n n 
C13 C16 LBN sing 276 n n 
C23 C24 LBN sing 277 n n 
C16 C19 LBN sing 278 n n 
C19 C21 LBN sing 279 n n 
C1 H1 LBN sing 280 n n 
C1 H2 LBN sing 281 n n 
C2 H3 LBN sing 282 n n 
C3 H4 LBN sing 283 n n 
C3 H5 LBN sing 284 n n 
C4 H6 LBN sing 285 n n 
C4 H7 LBN sing 286 n n 
C5 H8 LBN sing 287 n n 
C6 H9 LBN sing 288 n n 
C6 H10 LBN sing 289 n n 
C7 H11 LBN sing 290 n n 
C7 H12 LBN sing 291 n n 
C8 H13 LBN sing 292 n n 
C8 H14 LBN sing 293 n n 
C9 H15 LBN sing 294 n n 
C9 H16 LBN sing 295 n n 
C10 H17 LBN sing 296 n n 
C10 H18 LBN sing 297 n n 
C11 H19 LBN sing 298 n n 
C12 H20 LBN sing 299 n n 
C12 H21 LBN sing 300 n n 
C12 H22 LBN sing 301 n n 
C13 H23 LBN sing 302 n n 
C13 H24 LBN sing 303 n n 
C14 H25 LBN sing 304 n n 
C15 H26 LBN sing 305 n n 
C15 H27 LBN sing 306 n n 
C15 H28 LBN sing 307 n n 
C16 H30 LBN sing 308 n n 
C16 H31 LBN sing 309 n n 
C17 H32 LBN sing 310 n n 
C17 H33 LBN sing 311 n n 
C18 H34 LBN sing 312 n n 
C18 H35 LBN sing 313 n n 
C18 H36 LBN sing 314 n n 
C19 H37 LBN sing 315 n n 
C19 H38 LBN sing 316 n n 
C20 H39 LBN sing 317 n n 
C20 H40 LBN sing 318 n n 
C21 H41 LBN sing 319 n n 
C21 H42 LBN sing 320 n n 
C21 H43 LBN sing 321 n n 
C22 H44 LBN sing 322 n n 
C22 H45 LBN sing 323 n n 
C23 H46 LBN sing 324 n n 
C23 H47 LBN sing 325 n n 
C24 H48 LBN sing 326 n n 
C24 H49 LBN sing 327 n n 
C24 H50 LBN sing 328 n n 
C26 H51 LBN sing 329 n n 
C26 H52 LBN sing 330 n n 
C27 H53 LBN sing 331 n n 
C27 H54 LBN sing 332 n n 
C28 H55 LBN sing 333 n n 
C28 H56 LBN sing 334 n n 
C29 H57 LBN sing 335 n n 
C29 H58 LBN sing 336 n n 
C30 H59 LBN sing 337 n n 
C30 H60 LBN sing 338 n n 
C31 H61 LBN sing 339 n n 
C31 H62 LBN sing 340 n n 
C32 H63 LBN sing 341 n n 
C32 H64 LBN sing 342 n n 
C33 H65 LBN sing 343 n n 
C33 H66 LBN sing 344 n n 
C35 H67 LBN sing 345 n n 
C35 H68 LBN sing 346 n n 
C36 H69 LBN sing 347 n n 
C36 H70 LBN sing 348 n n 
C37 H71 LBN sing 349 n n 
C37 H72 LBN sing 350 n n 
C38 H73 LBN sing 351 n n 
C38 H74 LBN sing 352 n n 
C39 H75 LBN sing 353 n n 
C40 H76 LBN sing 354 n n 
C41 H77 LBN sing 355 n n 
C41 H78 LBN sing 356 n n 
C42 H79 LBN sing 357 n n 
C11 H80 LBN sing 358 n n 
C14 H81 LBN sing 359 n n 
C39 H82 LBN sing 360 n n 
C40 H83 LBN sing 361 n n 
#
_atom_sites.entry_id                     8ERP 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG B 1 501 401 MG MG . 
D 2 MG B 1 502 402 MG MG . 
E 3 LBN B 1 503 702 LBN XXX . 
F 3 LBN B 1 504 704 LBN XXX . 
G 4 CDC B 1 505 709 CDC CDC . 
H 3 LBN B 1 506 710 LBN LBN . 
I 3 LBN B 1 507 711 LBN XXX . 
J 3 LBN B 1 508 721 LBN XXX . 
K 3 LBN B 1 509 723 LBN XXX . 
L 3 LBN B 1 510 724 LBN XXX . 
M 3 LBN B 1 511 725 LBN XXX . 
N 3 LBN B 1 512 712 LBN XXX . 
O 3 LBN B 1 513 722 LBN XXX . 
P 3 LBN A 1 501 712 LBN XXX . 
Q 3 LBN A 1 502 722 LBN XXX . 
R 2 MG A 1 503 401 MG MG . 
S 2 MG A 1 504 402 MG MG . 
T 3 LBN A 1 505 702 LBN XXX . 
U 3 LBN A 1 506 704 LBN XXX . 
V 4 CDC A 1 507 709 CDC CDC . 
W 3 LBN A 1 508 710 LBN LBN . 
X 3 LBN A 1 509 711 LBN XXX . 
Y 3 LBN A 1 510 721 LBN XXX . 
Z 3 LBN A 1 511 723 LBN XXX . 
AA 3 LBN A 1 512 724 LBN XXX . 
BA 3 LBN A 1 513 725 LBN XXX . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 LBN . . . M 3 84.467 83.917 114.177 1 19.3 ? C4 LBN 511 B 1 
HETATM 2 C C7 LBN . . . M 3 84.435 85.429 114.341 1 19.3 ? C7 LBN 511 B 1 
HETATM 3 C C10 LBN . . . M 3 84.696 86.196 113.054 1 19.3 ? C10 LBN 511 B 1 
HETATM 4 C C13 LBN . . . M 3 84.691 87.704 113.227 1 19.3 ? C13 LBN 511 B 1 
HETATM 5 C C16 LBN . . . M 3 84.971 88.449 111.944 1 19.3 ? C16 LBN 511 B 1 
HETATM 6 C C25 LBN . . . M 3 85.448 82.949 125.584 1 19.3 ? C25 LBN 511 B 1 
HETATM 7 C C26 LBN . . . M 3 85.617 83.735 124.293 1 19.3 ? C26 LBN 511 B 1 
HETATM 8 C C27 LBN . . . M 3 85.048 83.036 123.067 1 19.3 ? C27 LBN 511 B 1 
HETATM 9 C C28 LBN . . . M 3 85.25 83.806 121.771 1 19.3 ? C28 LBN 511 B 1 
HETATM 10 C C29 LBN . . . M 3 84.685 83.107 120.545 1 19.3 ? C29 LBN 511 B 1 
HETATM 11 C C30 LBN . . . M 3 84.883 83.877 119.249 1 19.3 ? C30 LBN 511 B 1 
HETATM 12 C C31 LBN . . . M 3 84.514 83.088 118.002 1 19.3 ? C31 LBN 511 B 1 
HETATM 13 C C32 LBN . . . M 3 84.802 83.824 116.703 1 19.3 ? C32 LBN 511 B 1 
HETATM 14 C C33 LBN . . . M 3 84.22 83.153 115.469 1 19.3 ? C33 LBN 511 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           244 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           14 
#