data_8ESG
#
_model_server_result.job_id            v0ItjHVZA1zL1NRPt7cLog 
_model_server_result.datetime_utc      '2025-07-15 12:33:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8esg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    8ESG 
#
_exptl.entry_id    8ESG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              472.653 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(1R,3aS,3bR,5aR,7R,9aS,9bS,11aR)-1-[(2R)-6-fluoro-5-oxohexan-2-yl]-9a,11a-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-7-yl hydrogen sulfate (non-preferred name)' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8ESG 
_cell.length_a            157.362 
_cell.length_b            157.362 
_cell.length_c            140.718 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ESG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    'P 61 2 (x,y,z+5/12)' 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 -23.453 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 2 A CYS 2 1_555 C C1 WSR . A WSR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.784 ? 
covale ? covale2 B SG CYS 2 H CYS 2 1_555 D C1 WSR . H WSR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? 
#
_chem_comp.formula           'C25 H41 F O5 S' 
_chem_comp.formula_weight    472.653 
_chem_comp.id                WSR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(1R,3aS,3bR,5aR,7R,9aS,9bS,11aR)-1-[(2R)-6-fluoro-5-oxohexan-2-yl]-9a,11a-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-7-yl hydrogen sulfate (non-preferred name)' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O5 S1 WSR doub 374 n n 
C18 C17 WSR sing 375 n n 
C18 C19 WSR sing 376 n n 
C17 C16 WSR sing 377 n n 
C6 C5 WSR sing 378 n n 
C22 C23 WSR sing 379 n n 
C22 C21 WSR sing 380 n n 
C23 C24 WSR sing 381 n n 
S1 O3 WSR doub 382 n n 
S1 O4 WSR sing 383 n n 
S1 O2 WSR sing 384 n n 
C20 C19 WSR sing 385 n n 
C19 C21 WSR sing 386 n n 
C19 C14 WSR sing 387 n n 
C16 O2 WSR sing 388 n n 
C16 C15 WSR sing 389 n n 
C21 C11 WSR sing 390 n n 
C25 C24 WSR sing 391 n n 
C5 C7 WSR sing 392 n n 
C5 C4 WSR sing 393 n n 
C24 C7 WSR sing 394 n n 
C24 C10 WSR sing 395 n n 
C3 C4 WSR sing 396 n n 
C3 C2 WSR sing 397 n n 
C7 C8 WSR sing 398 n n 
C14 C15 WSR sing 399 n n 
C14 C13 WSR sing 400 n n 
C11 C10 WSR sing 401 n n 
C11 C12 WSR sing 402 n n 
C2 C1 WSR sing 403 n n 
C2 O1 WSR doub 404 n n 
C10 C9 WSR sing 405 n n 
C8 C9 WSR sing 406 n n 
C13 C12 WSR sing 407 n n 
C4 H1 WSR sing 408 n n 
C4 H2 WSR sing 409 n n 
C5 H3 WSR sing 410 n n 
C6 H4 WSR sing 411 n n 
C6 H5 WSR sing 412 n n 
C6 H6 WSR sing 413 n n 
C7 H7 WSR sing 414 n n 
C8 H8 WSR sing 415 n n 
C8 H9 WSR sing 416 n n 
C10 H10 WSR sing 417 n n 
C13 H11 WSR sing 418 n n 
C13 H12 WSR sing 419 n n 
C15 H13 WSR sing 420 n n 
C15 H14 WSR sing 421 n n 
C17 H15 WSR sing 422 n n 
C17 H16 WSR sing 423 n n 
C20 H17 WSR sing 424 n n 
C20 H18 WSR sing 425 n n 
C20 H19 WSR sing 426 n n 
C21 H20 WSR sing 427 n n 
C22 H21 WSR sing 428 n n 
C22 H22 WSR sing 429 n n 
C1 H23 WSR sing 430 n n 
C1 H24 WSR sing 431 n n 
C11 H26 WSR sing 432 n n 
C12 H27 WSR sing 433 n n 
C12 H28 WSR sing 434 n n 
C14 H29 WSR sing 435 n n 
C16 H30 WSR sing 436 n n 
C18 H31 WSR sing 437 n n 
C18 H32 WSR sing 438 n n 
C23 H33 WSR sing 439 n n 
C23 H34 WSR sing 440 n n 
C25 H35 WSR sing 441 n n 
C25 H36 WSR sing 442 n n 
C25 H37 WSR sing 443 n n 
C3 H38 WSR sing 444 n n 
C3 H39 WSR sing 445 n n 
C9 H40 WSR sing 446 n n 
C9 H41 WSR sing 447 n n 
C1 F1 WSR sing 448 n n 
O4 H25 WSR sing 449 n n 
#
_atom_sites.entry_id                     8ESG 
_atom_sites.fract_transf_matrix[1][1]    0.006355 
_atom_sites.fract_transf_matrix[1][2]    0.003669 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007338 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007106 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 WSR A 1 401 401 WSR LIG . 
D 2 WSR H 1 401 401 WSR LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 WSR . . . D 2 66.407 -54.609 1.68 1 69.64 ? C4 WSR 401 H 1 
HETATM 2 C C5 WSR . . . D 2 67.575 -55.33 2.379 1 71.8 ? C5 WSR 401 H 1 
HETATM 3 C C6 WSR . . . D 2 67.857 -54.648 3.714 1 64.06 ? C6 WSR 401 H 1 
HETATM 4 C C7 WSR . . . D 2 67.294 -56.843 2.517 1 73.27 ? C7 WSR 401 H 1 
HETATM 5 C C8 WSR . . . D 2 67.194 -57.563 1.142 1 66.12 ? C8 WSR 401 H 1 
HETATM 6 C C10 WSR . . . D 2 67.723 -59.146 2.862 1 68.03 ? C10 WSR 401 H 1 
HETATM 7 C C13 WSR . . . D 2 68.463 -62.877 3.63 1 70.4 ? C13 WSR 401 H 1 
HETATM 8 C C15 WSR . . . D 2 66.795 -62.921 5.515 1 68.67 ? C15 WSR 401 H 1 
HETATM 9 C C17 WSR . . . D 2 67.168 -61.611 7.595 1 63.68 ? C17 WSR 401 H 1 
HETATM 10 C C20 WSR . . . D 2 70.454 -61.549 5.525 1 71.35 ? C20 WSR 401 H 1 
HETATM 11 C C21 WSR . . . D 2 68.295 -60.287 5.015 1 69.28 ? C21 WSR 401 H 1 
HETATM 12 C C22 WSR . . . D 2 68.777 -58.934 5.549 1 71.28 ? C22 WSR 401 H 1 
HETATM 13 C C24 WSR . . . D 2 68.234 -57.773 3.347 1 69.47 ? C24 WSR 401 H 1 
HETATM 14 C C1 WSR . . . D 2 66.328 -52.122 -0.666 1 70.19 ? C1 WSR 401 H 1 
HETATM 15 C C11 WSR . . . D 2 68.418 -60.358 3.475 1 72.58 ? C11 WSR 401 H 1 
HETATM 16 C C12 WSR . . . D 2 67.838 -61.666 2.946 1 67.88 ? C12 WSR 401 H 1 
HETATM 17 C C14 WSR . . . D 2 68.274 -62.798 5.139 1 71.49 ? C14 WSR 401 H 1 
HETATM 18 C C16 WSR . . . D 2 66.566 -62.869 7.012 1 71.86 ? C16 WSR 401 H 1 
HETATM 19 C C18 WSR . . . D 2 68.648 -61.502 7.242 1 66.87 ? C18 WSR 401 H 1 
HETATM 20 C C19 WSR . . . D 2 68.926 -61.518 5.726 1 69.43 ? C19 WSR 401 H 1 
HETATM 21 C C2 WSR . . . D 2 65.677 -53.432 -0.47 1 71.25 ? C2 WSR 401 H 1 
HETATM 22 C C23 WSR . . . D 2 68.07 -57.753 4.872 1 65.37 ? C23 WSR 401 H 1 
HETATM 23 C C25 WSR . . . D 2 69.701 -57.54 2.946 1 68.26 ? C25 WSR 401 H 1 
HETATM 24 C C3 WSR . . . D 2 66.516 -54.503 0.159 1 72.45 ? C3 WSR 401 H 1 
HETATM 25 C C9 WSR . . . D 2 67.701 -59.002 1.346 1 67.05 ? C9 WSR 401 H 1 
HETATM 26 O O1 WSR . . . D 2 64.541 -53.641 -0.823 1 62.17 ? O1 WSR 401 H 1 
HETATM 27 O O2 WSR . . . D 2 65.109 -62.84 7.269 1 79.69 ? O2 WSR 401 H 1 
HETATM 28 O O3 WSR . . . D 2 65.684 -63.657 9.495 1 75.87 ? O3 WSR 401 H 1 
HETATM 29 O O4 WSR . . . D 2 63.771 -64.544 8.324 1 70.79 ? O4 WSR 401 H 1 
HETATM 30 O O5 WSR . . . D 2 63.725 -62.289 9.181 1 73.4 ? O5 WSR 401 H 1 
HETATM 31 S S1 WSR . . . D 2 64.539 -63.364 8.661 1 69.42 ? S1 WSR 401 H 1 
#
_model_server_stats.io_time_ms              72 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           31 
#