data_8ET4
#
_model_server_result.job_id            Pv4MEkAKgNtAML_VjWQNHA 
_model_server_result.datetime_utc      '2024-11-26 21:01:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8et4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":702}' 
#
_entry.id    8ET4 
#
_exptl.entry_id    8ET4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8ET4 
_cell.length_a            179.026 
_cell.length_b            179.026 
_cell.length_c            185.032 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ET4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        181 
_symmetry.space_group_name_Hall    'P 64 2 (x,y,z+1/6)' 
_symmetry.space_group_name_H-M     'P 64 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 89.513 -155.041064 0 
3 'crystal symmetry operation' 9_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -61.677333 
4 'crystal symmetry operation' 12_544 x,x-y-1,-z-1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 89.513 -155.041064 -61.677333 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PRO 254 A PRO 339 1_555 A N CSD 255 A CSD 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale2 A C CSD 255 A CSD 340 1_555 A N ASP 256 A ASP 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
metalc ? metalc1 A OD1 ASP 453 A ASP 538 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? 
metalc ? metalc2 A O MET 458 A MET 543 1_555 H MG MG . A MG 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? 
metalc ? metalc3 A O MET 458 A MET 543 1_555 H MG MG . A MG 707 12_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? 
metalc ? metalc4 A OE1 GLN 461 A GLN 546 1_555 H MG MG . A MG 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? 
metalc ? metalc5 A OE1 GLN 461 A GLN 546 1_555 H MG MG . A MG 707 12_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? 
metalc ? metalc6 A OD1 ASN 480 A ASN 565 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? 
metalc ? metalc7 A O HIS 482 A HIS 567 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc8 B MG MG . A MG 701 1_555 G OAK AUJ . A AUJ 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc9 B MG MG . A MG 701 1_555 G OAI AUJ . A AUJ 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? 
metalc ? metalc10 B MG MG . A MG 701 1_555 L O HOH . A HOH 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 153 n n 
PA O2A FAD sing 154 n n 
PA O5B FAD sing 155 n n 
PA O3P FAD sing 156 n n 
O2A HOA2 FAD sing 157 n n 
O5B C5B FAD sing 158 n n 
C5B C4B FAD sing 159 n n 
C5B H51A FAD sing 160 n n 
C5B H52A FAD sing 161 n n 
C4B O4B FAD sing 162 n n 
C4B C3B FAD sing 163 n n 
C4B H4B FAD sing 164 n n 
O4B C1B FAD sing 165 n n 
C3B O3B FAD sing 166 n n 
C3B C2B FAD sing 167 n n 
C3B H3B FAD sing 168 n n 
O3B HO3A FAD sing 169 n n 
C2B O2B FAD sing 170 n n 
C2B C1B FAD sing 171 n n 
C2B H2B FAD sing 172 n n 
O2B HO2A FAD sing 173 n n 
C1B N9A FAD sing 174 n n 
C1B H1B FAD sing 175 n n 
N9A C8A FAD sing 176 n y 
N9A C4A FAD sing 177 n y 
C8A N7A FAD doub 178 n y 
C8A H8A FAD sing 179 n n 
N7A C5A FAD sing 180 n y 
C5A C6A FAD sing 181 n y 
C5A C4A FAD doub 182 n y 
C6A N6A FAD sing 183 n n 
C6A N1A FAD doub 184 n y 
N6A H61A FAD sing 185 n n 
N6A H62A FAD sing 186 n n 
N1A C2A FAD sing 187 n y 
C2A N3A FAD doub 188 n y 
C2A H2A FAD sing 189 n n 
N3A C4A FAD sing 190 n y 
N1 C2 FAD sing 191 n n 
N1 C10 FAD doub 192 n n 
C2 O2 FAD doub 193 n n 
C2 N3 FAD sing 194 n n 
N3 C4 FAD sing 195 n n 
N3 HN3 FAD sing 196 n n 
C4 O4 FAD doub 197 n n 
C4 C4X FAD sing 198 n n 
C4X N5 FAD doub 199 n n 
C4X C10 FAD sing 200 n n 
N5 C5X FAD sing 201 n n 
C5X C6 FAD doub 202 n y 
C5X C9A FAD sing 203 n y 
C6 C7 FAD sing 204 n y 
C6 H6 FAD sing 205 n n 
C7 C7M FAD sing 206 n n 
C7 C8 FAD doub 207 n y 
C7M HM71 FAD sing 208 n n 
C7M HM72 FAD sing 209 n n 
C7M HM73 FAD sing 210 n n 
C8 C8M FAD sing 211 n n 
C8 C9 FAD sing 212 n y 
C8M HM81 FAD sing 213 n n 
C8M HM82 FAD sing 214 n n 
C8M HM83 FAD sing 215 n n 
C9 C9A FAD doub 216 n y 
C9 H9 FAD sing 217 n n 
C9A N10 FAD sing 218 n n 
N10 C10 FAD sing 219 n n 
N10 C1' FAD sing 220 n n 
C1' C2' FAD sing 221 n n 
C1' "H1'1" FAD sing 222 n n 
C1' "H1'2" FAD sing 223 n n 
C2' O2' FAD sing 224 n n 
C2' C3' FAD sing 225 n n 
C2' H2' FAD sing 226 n n 
O2' HO2' FAD sing 227 n n 
C3' O3' FAD sing 228 n n 
C3' C4' FAD sing 229 n n 
C3' H3' FAD sing 230 n n 
O3' HO3' FAD sing 231 n n 
C4' O4' FAD sing 232 n n 
C4' C5' FAD sing 233 n n 
C4' H4' FAD sing 234 n n 
O4' HO4' FAD sing 235 n n 
C5' O5' FAD sing 236 n n 
C5' "H5'1" FAD sing 237 n n 
C5' "H5'2" FAD sing 238 n n 
O5' P FAD sing 239 n n 
P O1P FAD doub 240 n n 
P O2P FAD sing 241 n n 
P O3P FAD sing 242 n n 
O2P HOP2 FAD sing 243 n n 
#
_atom_sites.entry_id                     8ET4 
_atom_sites.fract_transf_matrix[1][1]    0.005586 
_atom_sites.fract_transf_matrix[1][2]    0.003225 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00645 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005404 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 701 701 MG MG . 
C 3 FAD A 1 702 702 FAD FAD . 
D 4 WRQ A 1 703 801 WRQ AS . 
E 5 TLA A 1 704 1001 TLA TAR . 
F 6 NHE A 1 705 1101 NHE NHE . 
G 7 AUJ A 1 706 1201 AUJ DR2 . 
H 2 MG A 1 707 1 MG MG . 
I 2 MG A 1 708 2 MG MG . 
J 8 SO4 A 1 709 1 SO4 SO4 . 
K 8 SO4 A 1 710 2 SO4 SO4 . 
L 9 HOH A 1 1301 1301 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 3 57.972 -67.851 -8.751 1 45.57 ? PA FAD 702 A 1 
HETATM 2 O O1A FAD . . . C 3 58.679 -66.608 -8.267 1 38.99 ? O1A FAD 702 A 1 
HETATM 3 O O2A FAD . . . C 3 58.467 -68.252 -10.127 1 53.61 ? O2A FAD 702 A 1 
HETATM 4 O O5B FAD . . . C 3 56.318 -67.545 -8.808 1 51.69 ? O5B FAD 702 A 1 
HETATM 5 C C5B FAD . . . C 3 55.692 -66.907 -7.682 1 52.46 ? C5B FAD 702 A 1 
HETATM 6 C C4B FAD . . . C 3 54.807 -67.807 -7.072 1 39.46 ? C4B FAD 702 A 1 
HETATM 7 O O4B FAD . . . C 3 53.972 -67.095 -6.025 1 54.83 ? O4B FAD 702 A 1 
HETATM 8 C C3B FAD . . . C 3 53.766 -68.386 -8.135 1 43.08 ? C3B FAD 702 A 1 
HETATM 9 O O3B FAD . . . C 3 53.297 -69.74 -7.686 1 47.12 ? O3B FAD 702 A 1 
HETATM 10 C C2B FAD . . . C 3 52.64 -67.371 -8.03 1 42.37 ? C2B FAD 702 A 1 
HETATM 11 O O2B FAD . . . C 3 51.33 -68.008 -8.261 1 49.6 ? O2B FAD 702 A 1 
HETATM 12 C C1B FAD . . . C 3 52.741 -66.896 -6.448 1 49.2 ? C1B FAD 702 A 1 
HETATM 13 N N9A FAD . . . C 3 52.393 -65.515 -6.315 1 49.79 ? N9A FAD 702 A 1 
HETATM 14 C C8A FAD . . . C 3 52.719 -64.55 -7.154 1 51.27 ? C8A FAD 702 A 1 
HETATM 15 N N7A FAD . . . C 3 52.23 -63.399 -6.701 1 50.45 ? N7A FAD 702 A 1 
HETATM 16 C C5A FAD . . . C 3 51.579 -63.627 -5.549 1 56.21 ? C5A FAD 702 A 1 
HETATM 17 C C6A FAD . . . C 3 50.872 -62.835 -4.62 1 52.08 ? C6A FAD 702 A 1 
HETATM 18 N N6A FAD . . . C 3 50.728 -61.402 -4.829 1 64.85 ? N6A FAD 702 A 1 
HETATM 19 N N1A FAD . . . C 3 50.341 -63.421 -3.556 1 53.82 ? N1A FAD 702 A 1 
HETATM 20 C C2A FAD . . . C 3 50.458 -64.726 -3.346 1 57.15 ? C2A FAD 702 A 1 
HETATM 21 N N3A FAD . . . C 3 51.116 -65.501 -4.199 1 47.26 ? N3A FAD 702 A 1 
HETATM 22 C C4A FAD . . . C 3 51.683 -64.983 -5.3 1 57 ? C4A FAD 702 A 1 
HETATM 23 N N1 FAD . . . C 3 66.071 -71.207 -7.401 1 59.42 ? N1 FAD 702 A 1 
HETATM 24 C C2 FAD . . . C 3 66.263 -71.437 -6.107 1 59.46 ? C2 FAD 702 A 1 
HETATM 25 O O2 FAD . . . C 3 65.311 -70.995 -5.185 1 49.32 ? O2 FAD 702 A 1 
HETATM 26 N N3 FAD . . . C 3 67.34 -72.076 -5.657 1 55.06 ? N3 FAD 702 A 1 
HETATM 27 C C4 FAD . . . C 3 68.265 -72.508 -6.5 1 61.12 ? C4 FAD 702 A 1 
HETATM 28 O O4 FAD . . . C 3 69.396 -73.18 -6.003 1 54.19 ? O4 FAD 702 A 1 
HETATM 29 C C4X FAD . . . C 3 68.106 -72.29 -7.888 1 60.26 ? C4X FAD 702 A 1 
HETATM 30 N N5 FAD . . . C 3 69.023 -72.708 -8.789 1 55.2 ? N5 FAD 702 A 1 
HETATM 31 C C5X FAD . . . C 3 68.945 -72.203 -10.041 1 59.19 ? C5X FAD 702 A 1 
HETATM 32 C C6 FAD . . . C 3 70.046 -72.372 -10.907 1 52.95 ? C6 FAD 702 A 1 
HETATM 33 C C7 FAD . . . C 3 69.993 -71.858 -12.201 1 55.02 ? C7 FAD 702 A 1 
HETATM 34 C C7M FAD . . . C 3 71.187 -72.033 -13.151 1 43.32 ? C7M FAD 702 A 1 
HETATM 35 C C8 FAD . . . C 3 68.855 -71.183 -12.64 1 54.72 ? C8 FAD 702 A 1 
HETATM 36 C C8M FAD . . . C 3 68.811 -70.624 -14.064 1 42.86 ? C8M FAD 702 A 1 
HETATM 37 C C9 FAD . . . C 3 67.762 -71.017 -11.782 1 53.24 ? C9 FAD 702 A 1 
HETATM 38 C C9A FAD . . . C 3 67.817 -71.535 -10.471 1 63.24 ? C9A FAD 702 A 1 
HETATM 39 N N10 FAD . . . C 3 66.766 -71.381 -9.623 1 59.32 ? N10 FAD 702 A 1 
HETATM 40 C C10 FAD . . . C 3 66.972 -71.622 -8.309 1 55.66 ? C10 FAD 702 A 1 
HETATM 41 C C1' FAD . . . C 3 65.576 -70.591 -10.056 1 55.87 ? C1' FAD 702 A 1 
HETATM 42 C C2' FAD . . . C 3 64.36 -71.514 -10.378 1 34.91 ? C2' FAD 702 A 1 
HETATM 43 O O2' FAD . . . C 3 64.51 -72.605 -11.289 1 53.04 ? O2' FAD 702 A 1 
HETATM 44 C C3' FAD . . . C 3 62.931 -71.04 -10.015 1 52.87 ? C3' FAD 702 A 1 
HETATM 45 O O3' FAD . . . C 3 62.67 -69.859 -10.692 1 51.75 ? O3' FAD 702 A 1 
HETATM 46 C C4' FAD . . . C 3 62.807 -70.853 -8.493 1 49.12 ? C4' FAD 702 A 1 
HETATM 47 O O4' FAD . . . C 3 63.341 -71.944 -7.837 1 65.44 ? O4' FAD 702 A 1 
HETATM 48 C C5' FAD . . . C 3 61.312 -70.781 -8.099 1 52.94 ? C5' FAD 702 A 1 
HETATM 49 O O5' FAD . . . C 3 60.987 -69.446 -7.707 1 44.17 ? O5' FAD 702 A 1 
HETATM 50 P P FAD . . . C 3 59.626 -69.282 -6.728 1 51.62 ? P FAD 702 A 1 
HETATM 51 O O1P FAD . . . C 3 59.496 -70.53 -5.879 1 46.66 ? O1P FAD 702 A 1 
HETATM 52 O O2P FAD . . . C 3 59.774 -68.049 -5.869 1 43.16 ? O2P FAD 702 A 1 
HETATM 53 O O3P FAD . . . C 3 58.249 -69.119 -7.677 1 47.46 ? O3P FAD 702 A 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#