data_8ET5 # _model_server_result.job_id ez0c-5GrfzNWppIFftWzXw _model_server_result.datetime_utc '2024-11-06 03:08:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8et5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":706}' # _entry.id 8ET5 # _exptl.entry_id 8ET5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'L(+)-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8ET5 _cell.length_a 179.593 _cell.length_b 179.593 _cell.length_c 184.772 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ET5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall 'P 64 2 (x,y,z+1/6)' _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 89.7965 -155.5321 0 3 'crystal symmetry operation' 9_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -61.590667 4 'crystal symmetry operation' 12_544 x,x-y-1,-z-1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 89.7965 -155.5321 -61.590667 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 254 A PRO 339 1_555 A N CSD 255 A CSD 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C CSD 255 A CSD 340 1_555 A N ASP 256 A ASP 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 A O ILE 316 A ILE 401 1_555 I MG MG . A MG 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc2 A O ILE 316 A ILE 401 1_555 I MG MG . A MG 708 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc3 A OD1 ASP 453 A ASP 538 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc4 A O MET 458 A MET 543 1_555 H MG MG . A MG 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc5 A O MET 458 A MET 543 1_555 H MG MG . A MG 707 12_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc6 A OE1 GLN 461 A GLN 546 1_555 H MG MG . A MG 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? metalc ? metalc7 A OE1 GLN 461 A GLN 546 1_555 H MG MG . A MG 707 12_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? metalc ? metalc8 A OD1 ASN 480 A ASN 565 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc9 A O HIS 482 A HIS 567 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc10 B MG MG . A MG 701 1_555 F OAK AUJ . A AUJ 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc11 B MG MG . A MG 701 1_555 F OAI AUJ . A AUJ 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc12 B MG MG . A MG 701 1_555 N O HOH . A HOH 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TLA _chem_comp.mon_nstd_flag . _chem_comp.name 'L(+)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TLA doub 501 n n O11 C1 TLA sing 502 n n O11 H11 TLA sing 503 n n C1 C2 TLA sing 504 n n C2 O2 TLA sing 505 n n C2 C3 TLA sing 506 n n C2 H2 TLA sing 507 n n O2 HA TLA sing 508 n n C3 O3 TLA sing 509 n n C3 C4 TLA sing 510 n n C3 H3 TLA sing 511 n n O3 HB TLA sing 512 n n C4 O4 TLA doub 513 n n C4 O41 TLA sing 514 n n O41 H41 TLA sing 515 n n # _atom_sites.entry_id 8ET5 _atom_sites.fract_transf_matrix[1][1] 0.005568 _atom_sites.fract_transf_matrix[1][2] 0.003215 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00643 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005412 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 701 701 MG MG . C 3 FAD A 1 702 702 FAD FAD . D 4 WRQ A 1 703 801 WRQ AS . E 5 NHE A 1 704 1101 NHE NHE . F 6 AUJ A 1 705 1201 AUJ DR2 . G 7 TLA A 1 706 1301 TLA TAR . H 2 MG A 1 707 1 MG MG . I 2 MG A 1 708 2 MG MG . J 8 SO4 A 1 709 1 SO4 SO4 . K 8 SO4 A 1 710 3 SO4 SO4 . L 8 SO4 A 1 711 4 SO4 SO4 . M 8 SO4 A 1 712 5 SO4 SO4 . N 9 HOH A 1 1401 1401 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TLA . . . G 7 39.783 -70.383 -6.721 0.9 96.38 ? O1 TLA 706 A 1 HETATM 2 O O11 TLA . . . G 7 41.079 -68.956 -5.701 0.9 91.04 -1 O11 TLA 706 A 1 HETATM 3 C C1 TLA . . . G 7 40.006 -69.615 -5.748 0.9 116.97 ? C1 TLA 706 A 1 HETATM 4 C C2 TLA . . . G 7 38.979 -69.481 -4.625 0.9 135.35 ? C2 TLA 706 A 1 HETATM 5 O O2 TLA . . . G 7 38.576 -70.753 -4.199 0.9 104.08 ? O2 TLA 706 A 1 HETATM 6 C C3 TLA . . . G 7 37.767 -68.7 -5.127 0.9 127.94 ? C3 TLA 706 A 1 HETATM 7 O O3 TLA . . . G 7 38.191 -67.669 -5.975 0.9 98.33 ? O3 TLA 706 A 1 HETATM 8 C C4 TLA . . . G 7 36.83 -69.635 -5.89 0.9 122.43 ? C4 TLA 706 A 1 HETATM 9 O O4 TLA . . . G 7 37.124 -70.009 -7.056 0.9 107.84 -1 O4 TLA 706 A 1 HETATM 10 O O41 TLA . . . G 7 35.762 -70.03 -5.352 0.9 97.85 ? O41 TLA 706 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #