data_8EUR
#
_model_server_result.job_id            DlD1_CRYhKTEfVSgggGa7w 
_model_server_result.datetime_utc      '2024-11-27 14:23:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8eur 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":901}' 
#
_entry.id    8EUR 
#
_exptl.entry_id    8EUR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              489.48 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-{[2-nitro-4-(triazan-1-yl)phenyl]amino}ethyl (2-{[(1S,2S,3R,4S,5S)-2,3,4,5-tetrahydroxy-5-(hydroxymethyl)cyclohexyl]amino}ethyl)carbamate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8EUR 
_cell.length_a            136.332 
_cell.length_b            178.952 
_cell.length_c            180.571 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8EUR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,Q 1 1 
B,I,J,K,L,M,N,O,P,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 656 A CYS 654 1_555 A SG CYS 670 A CYS 668 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf2 B SG CYS 656 B CYS 654 1_555 B SG CYS 670 B CYS 668 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
#
_chem_comp.formula           'C18 H31 N7 O9' 
_chem_comp.formula_weight    489.48 
_chem_comp.id                WAS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-{[2-nitro-4-(triazan-1-yl)phenyl]amino}ethyl (2-{[(1S,2S,3R,4S,5S)-2,3,4,5-tetrahydroxy-5-(hydroxymethyl)cyclohexyl]amino}ethyl)carbamate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O5 C5 WAS sing 425 n n 
O8 N4 WAS doub 426 n n 
C9 N2 WAS sing 427 n n 
C9 C8 WAS sing 428 n n 
N2 C10 WAS sing 429 n n 
O9 N4 WAS sing 430 n n 
N1 C8 WAS sing 431 n n 
N1 C6 WAS sing 432 n n 
O6 C10 WAS sing 433 n n 
O6 C11 WAS sing 434 n n 
N4 C18 WAS sing 435 n n 
C5 C6 WAS sing 436 n n 
C5 C4 WAS sing 437 n n 
C10 O7 WAS doub 438 n n 
C6 C1 WAS sing 439 n n 
C12 C11 WAS sing 440 n n 
C12 N3 WAS sing 441 n n 
O4 C4 WAS sing 442 n n 
C4 C3 WAS sing 443 n n 
N3 C13 WAS sing 444 n n 
C18 C13 WAS doub 445 n y 
C18 C17 WAS sing 446 n y 
C1 C2 WAS sing 447 n n 
C13 C14 WAS sing 448 n y 
C17 C16 WAS doub 449 n y 
C3 C2 WAS sing 450 n n 
C3 O3 WAS sing 451 n n 
O2 C2 WAS sing 452 n n 
C2 C7 WAS sing 453 n n 
C14 C15 WAS doub 454 n y 
C16 C15 WAS sing 455 n y 
C16 N5 WAS sing 456 n n 
C7 O1 WAS sing 457 n n 
N5 N6 WAS sing 458 n n 
N6 N7 WAS sing 459 n n 
N1 H1 WAS sing 460 n n 
N3 H3 WAS sing 461 n n 
C4 H4 WAS sing 462 n n 
C5 H5 WAS sing 463 n n 
C6 H6 WAS sing 464 n n 
C7 H7 WAS sing 465 n n 
C7 H8 WAS sing 466 n n 
C8 H9 WAS sing 467 n n 
C8 H10 WAS sing 468 n n 
C15 H11 WAS sing 469 n n 
C17 H12 WAS sing 470 n n 
C1 H13 WAS sing 471 n n 
C1 H14 WAS sing 472 n n 
C11 H15 WAS sing 473 n n 
C11 H16 WAS sing 474 n n 
C12 H17 WAS sing 475 n n 
C12 H18 WAS sing 476 n n 
C14 H19 WAS sing 477 n n 
C3 H20 WAS sing 478 n n 
C9 H21 WAS sing 479 n n 
C9 H22 WAS sing 480 n n 
N2 H23 WAS sing 481 n n 
N5 H24 WAS sing 482 n n 
N6 H25 WAS sing 483 n n 
N7 H26 WAS sing 484 n n 
N7 H27 WAS sing 485 n n 
O1 H28 WAS sing 486 n n 
O2 H29 WAS sing 487 n n 
O3 H30 WAS sing 488 n n 
O4 H31 WAS sing 489 n n 
O5 H32 WAS sing 490 n n 
#
_atom_sites.entry_id                     8EUR 
_atom_sites.fract_transf_matrix[1][1]    0.007335 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005588 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005538 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 WAS A 1 901 901 WAS LIG . 
D 3 GOL A 1 902 1001 GOL GOL . 
E 4 SO4 A 1 903 1 SO4 SO4 . 
F 4 SO4 A 1 904 6 SO4 SO4 . 
G 4 SO4 A 1 905 7 SO4 SO4 . 
H 4 SO4 A 1 906 9 SO4 SO4 . 
I 2 WAS B 1 901 901 WAS LIG . 
J 3 GOL B 1 902 1001 GOL GOL . 
K 5 BTB B 1 903 1101 BTB BTB . 
L 4 SO4 B 1 904 2 SO4 SO4 . 
M 4 SO4 B 1 905 3 SO4 SO4 . 
N 4 SO4 B 1 906 4 SO4 SO4 . 
O 4 SO4 B 1 907 5 SO4 SO4 . 
P 4 SO4 B 1 908 8 SO4 SO4 . 
Q 6 HOH A 1 1001 106 HOH HOH . 
Q 6 HOH A 2 1002 30 HOH HOH . 
Q 6 HOH A 3 1003 109 HOH HOH . 
Q 6 HOH A 4 1004 92 HOH HOH . 
Q 6 HOH A 5 1005 99 HOH HOH . 
Q 6 HOH A 6 1006 45 HOH HOH . 
Q 6 HOH A 7 1007 101 HOH HOH . 
Q 6 HOH A 8 1008 64 HOH HOH . 
Q 6 HOH A 9 1009 83 HOH HOH . 
Q 6 HOH A 10 1010 39 HOH HOH . 
Q 6 HOH A 11 1011 15 HOH HOH . 
Q 6 HOH A 12 1012 16 HOH HOH . 
Q 6 HOH A 13 1013 7 HOH HOH . 
Q 6 HOH A 14 1014 100 HOH HOH . 
Q 6 HOH A 15 1015 5 HOH HOH . 
Q 6 HOH A 16 1016 2 HOH HOH . 
Q 6 HOH A 17 1017 96 HOH HOH . 
Q 6 HOH A 18 1018 53 HOH HOH . 
Q 6 HOH A 19 1019 44 HOH HOH . 
Q 6 HOH A 20 1020 27 HOH HOH . 
Q 6 HOH A 21 1021 34 HOH HOH . 
Q 6 HOH A 22 1022 82 HOH HOH . 
Q 6 HOH A 23 1023 47 HOH HOH . 
Q 6 HOH A 24 1024 55 HOH HOH . 
Q 6 HOH A 25 1025 107 HOH HOH . 
Q 6 HOH A 26 1026 58 HOH HOH . 
Q 6 HOH A 27 1027 56 HOH HOH . 
Q 6 HOH A 28 1028 38 HOH HOH . 
Q 6 HOH A 29 1029 36 HOH HOH . 
Q 6 HOH A 30 1030 17 HOH HOH . 
Q 6 HOH A 31 1031 104 HOH HOH . 
Q 6 HOH A 32 1032 70 HOH HOH . 
Q 6 HOH A 33 1033 20 HOH HOH . 
Q 6 HOH A 34 1034 111 HOH HOH . 
Q 6 HOH A 35 1035 22 HOH HOH . 
Q 6 HOH A 36 1036 49 HOH HOH . 
Q 6 HOH A 37 1037 37 HOH HOH . 
Q 6 HOH A 38 1038 57 HOH HOH . 
Q 6 HOH A 39 1039 72 HOH HOH . 
Q 6 HOH A 40 1040 98 HOH HOH . 
Q 6 HOH A 41 1041 76 HOH HOH . 
Q 6 HOH A 42 1042 11 HOH HOH . 
Q 6 HOH A 43 1043 19 HOH HOH . 
Q 6 HOH A 44 1044 10 HOH HOH . 
Q 6 HOH A 45 1045 23 HOH HOH . 
Q 6 HOH A 46 1046 40 HOH HOH . 
Q 6 HOH A 47 1047 112 HOH HOH . 
Q 6 HOH A 48 1048 108 HOH HOH . 
Q 6 HOH A 49 1049 89 HOH HOH . 
Q 6 HOH A 50 1050 103 HOH HOH . 
Q 6 HOH A 51 1051 113 HOH HOH . 
Q 6 HOH A 52 1052 9 HOH HOH . 
Q 6 HOH A 53 1053 84 HOH HOH . 
Q 6 HOH A 54 1054 65 HOH HOH . 
Q 6 HOH A 55 1055 60 HOH HOH . 
Q 6 HOH A 56 1056 67 HOH HOH . 
Q 6 HOH A 57 1057 18 HOH HOH . 
Q 6 HOH A 58 1058 69 HOH HOH . 
Q 6 HOH A 59 1059 25 HOH HOH . 
Q 6 HOH A 60 1060 50 HOH HOH . 
Q 6 HOH A 61 1061 63 HOH HOH . 
Q 6 HOH A 62 1062 28 HOH HOH . 
Q 6 HOH A 63 1063 4 HOH HOH . 
Q 6 HOH A 64 1064 81 HOH HOH . 
Q 6 HOH A 65 1065 79 HOH HOH . 
Q 6 HOH A 66 1066 93 HOH HOH . 
Q 6 HOH A 67 1067 88 HOH HOH . 
R 6 HOH B 1 1001 95 HOH HOH . 
R 6 HOH B 2 1002 14 HOH HOH . 
R 6 HOH B 3 1003 61 HOH HOH . 
R 6 HOH B 4 1004 6 HOH HOH . 
R 6 HOH B 5 1005 41 HOH HOH . 
R 6 HOH B 6 1006 3 HOH HOH . 
R 6 HOH B 7 1007 78 HOH HOH . 
R 6 HOH B 8 1008 94 HOH HOH . 
R 6 HOH B 9 1009 105 HOH HOH . 
R 6 HOH B 10 1010 8 HOH HOH . 
R 6 HOH B 11 1011 1 HOH HOH . 
R 6 HOH B 12 1012 46 HOH HOH . 
R 6 HOH B 13 1013 87 HOH HOH . 
R 6 HOH B 14 1014 54 HOH HOH . 
R 6 HOH B 15 1015 24 HOH HOH . 
R 6 HOH B 16 1016 59 HOH HOH . 
R 6 HOH B 17 1017 68 HOH HOH . 
R 6 HOH B 18 1018 43 HOH HOH . 
R 6 HOH B 19 1019 31 HOH HOH . 
R 6 HOH B 20 1020 26 HOH HOH . 
R 6 HOH B 21 1021 51 HOH HOH . 
R 6 HOH B 22 1022 97 HOH HOH . 
R 6 HOH B 23 1023 62 HOH HOH . 
R 6 HOH B 24 1024 48 HOH HOH . 
R 6 HOH B 25 1025 32 HOH HOH . 
R 6 HOH B 26 1026 29 HOH HOH . 
R 6 HOH B 27 1027 21 HOH HOH . 
R 6 HOH B 28 1028 85 HOH HOH . 
R 6 HOH B 29 1029 71 HOH HOH . 
R 6 HOH B 30 1030 52 HOH HOH . 
R 6 HOH B 31 1031 33 HOH HOH . 
R 6 HOH B 32 1032 77 HOH HOH . 
R 6 HOH B 33 1033 42 HOH HOH . 
R 6 HOH B 34 1034 86 HOH HOH . 
R 6 HOH B 35 1035 35 HOH HOH . 
R 6 HOH B 36 1036 74 HOH HOH . 
R 6 HOH B 37 1037 66 HOH HOH . 
R 6 HOH B 38 1038 110 HOH HOH . 
R 6 HOH B 39 1039 114 HOH HOH . 
R 6 HOH B 40 1040 75 HOH HOH . 
R 6 HOH B 41 1041 80 HOH HOH . 
R 6 HOH B 42 1042 102 HOH HOH . 
R 6 HOH B 43 1043 13 HOH HOH . 
R 6 HOH B 44 1044 12 HOH HOH . 
R 6 HOH B 45 1045 73 HOH HOH . 
R 6 HOH B 46 1046 91 HOH HOH . 
R 6 HOH B 47 1047 90 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 WAS . . . I 2 -6.781 -40.942 -35.192 1 43.93 ? N1 WAS 901 B 1 
HETATM 2 N N3 WAS . . . I 2 -12.06 -39.439 -39.259 1 111.12 ? N3 WAS 901 B 1 
HETATM 3 C C4 WAS . . . I 2 -6.04 -42.738 -33.071 1 43.33 ? C4 WAS 901 B 1 
HETATM 4 C C5 WAS . . . I 2 -5.316 -41.396 -33.312 1 46.4 ? C5 WAS 901 B 1 
HETATM 5 C C6 WAS . . . I 2 -6.303 -40.393 -33.918 1 42.47 ? C6 WAS 901 B 1 
HETATM 6 C C7 WAS . . . I 2 -9.323 -41.219 -31.627 1 42.61 ? C7 WAS 901 B 1 
HETATM 7 C C8 WAS . . . I 2 -6.814 -39.919 -36.246 1 53.69 ? C8 WAS 901 B 1 
HETATM 8 C C10 WAS . . . I 2 -10.123 -40.843 -37.796 1 85.39 ? C10 WAS 901 B 1 
HETATM 9 C C13 WAS . . . I 2 -12.425 -38.049 -39.557 1 108.58 ? C13 WAS 901 B 1 
HETATM 10 C C15 WAS . . . I 2 -13.872 -36.145 -39.237 1 125.01 ? C15 WAS 901 B 1 
HETATM 11 C C17 WAS . . . I 2 -12.005 -35.958 -40.737 1 100.08 ? C17 WAS 901 B 1 
HETATM 12 C C1 WAS . . . I 2 -7.49 -40.166 -32.975 1 39.79 ? C1 WAS 901 B 1 
HETATM 13 C C11 WAS . . . I 2 -12.52 -41.185 -37.555 1 88.17 ? C11 WAS 901 B 1 
HETATM 14 C C12 WAS . . . I 2 -13.014 -40.459 -38.811 1 93.31 ? C12 WAS 901 B 1 
HETATM 15 C C14 WAS . . . I 2 -13.532 -37.466 -38.941 1 108.45 ? C14 WAS 901 B 1 
HETATM 16 C C16 WAS . . . I 2 -13.118 -35.376 -40.139 1 115.28 ? C16 WAS 901 B 1 
HETATM 17 C C18 WAS . . . I 2 -11.665 -37.285 -40.46 1 111.37 ? C18 WAS 901 B 1 
HETATM 18 C C2 WAS . . . I 2 -8.2 -41.477 -32.619 1 41.64 ? C2 WAS 901 B 1 
HETATM 19 C C3 WAS . . . I 2 -7.228 -42.552 -32.099 1 43.36 ? C3 WAS 901 B 1 
HETATM 20 C C9 WAS . . . I 2 -7.583 -40.484 -37.445 1 68.21 ? C9 WAS 901 B 1 
HETATM 21 N N2 WAS . . . I 2 -8.956 -39.965 -37.554 1 78.86 ? N2 WAS 901 B 1 
HETATM 22 N N4 WAS . . . I 2 -10.484 -37.837 -41.115 1 122.77 1 N4 WAS 901 B 1 
HETATM 23 N N5 WAS . . . I 2 -13.493 -33.986 -40.458 1 103.66 ? N5 WAS 901 B 1 
HETATM 24 N N6 WAS . . . I 2 -14.854 -33.579 -40.695 1 89.76 1 N6 WAS 901 B 1 
HETATM 25 N N7 WAS . . . I 2 -14.995 -32.234 -41.185 1 70.38 -1 N7 WAS 901 B 1 
HETATM 26 O O1 WAS . . . I 2 -8.78 -40.555 -30.508 1 47.09 ? O1 WAS 901 B 1 
HETATM 27 O O2 WAS . . . I 2 -8.79 -42.019 -33.756 1 44.91 ? O2 WAS 901 B 1 
HETATM 28 O O3 WAS . . . I 2 -7.89 -43.784 -32.028 1 35.65 ? O3 WAS 901 B 1 
HETATM 29 O O4 WAS . . . I 2 -5.155 -43.62 -32.446 1 38.83 ? O4 WAS 901 B 1 
HETATM 30 O O5 WAS . . . I 2 -4.126 -41.573 -34.077 1 47.22 ? O5 WAS 901 B 1 
HETATM 31 O O6 WAS . . . I 2 -11.321 -40.607 -37.078 1 91.34 ? O6 WAS 901 B 1 
HETATM 32 O O7 WAS . . . I 2 -10.087 -41.742 -38.589 1 85.67 ? O7 WAS 901 B 1 
HETATM 33 O O8 WAS . . . I 2 -10.014 -39.139 -40.831 1 120.51 -1 O8 WAS 901 B 1 
HETATM 34 O O9 WAS . . . I 2 -9.785 -37.033 -42.035 1 122.26 ? O9 WAS 901 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           34 
#