data_8EV2 # _model_server_result.job_id fk-W_WWIHdAKgLeMPpgdlw _model_server_result.datetime_utc '2024-11-16 16:21:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ev2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 8EV2 # _exptl.entry_id 8EV2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 378.873 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3~{a}~{R},4~{S},9~{b}~{S})-4-(2-chloranyl-4-oxidanyl-phenyl)-2,3,3~{a},4,5,9~{b}-hexahydro-1~{H}-cyclopenta[c]quinoline-8-sulfonamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.04 _cell.angle_gamma 90 _cell.entry_id 8EV2 _cell.length_a 53.964 _cell.length_b 81.769 _cell.length_c 58.555 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EV2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,M,O 1 1 B,D,I,J,K,L,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 I N N ? 3 J N N # _chem_comp.formula 'C18 H19 Cl N2 O3 S' _chem_comp.formula_weight 378.873 _chem_comp.id LYQ _chem_comp.mon_nstd_flag . _chem_comp.name (3~{a}~{R},4~{S},9~{b}~{S})-4-(2-chloranyl-4-oxidanyl-phenyl)-2,3,3~{a},4,5,9~{b}-hexahydro-1~{H}-cyclopenta[c]quinoline-8-sulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C4 LYQ doub 194 n y C3 C2 LYQ sing 195 n y O C2 LYQ sing 196 n n C4 C5 LYQ sing 197 n y C2 C1 LYQ doub 198 n y C5 C6 LYQ sing 199 n n C5 C LYQ doub 200 n y C6 C7 LYQ sing 201 n n C6 N LYQ sing 202 n n C1 C LYQ sing 203 n y C CL LYQ sing 204 n n C7 C8 LYQ sing 205 n n C7 C11 LYQ sing 206 n n N C13 LYQ sing 207 n n C8 C12 LYQ sing 208 n n C8 C9 LYQ sing 209 n n C13 C12 LYQ doub 210 n y C13 C14 LYQ sing 211 n y C12 C17 LYQ sing 212 n y C14 C15 LYQ doub 213 n y C9 C10 LYQ sing 214 n n C11 C10 LYQ sing 215 n n C17 C16 LYQ doub 216 n y C15 C16 LYQ sing 217 n y C16 S LYQ sing 218 n n N1 S LYQ sing 219 n n O2 S LYQ doub 220 n n S O1 LYQ doub 221 n n C4 H1 LYQ sing 222 n n C6 H2 LYQ sing 223 n n N1 H3 LYQ sing 224 n n N1 H4 LYQ sing 225 n n C7 H5 LYQ sing 226 n n C8 H6 LYQ sing 227 n n C9 H7 LYQ sing 228 n n C9 H8 LYQ sing 229 n n C10 H9 LYQ sing 230 n n C10 H10 LYQ sing 231 n n C11 H11 LYQ sing 232 n n C11 H12 LYQ sing 233 n n C14 H13 LYQ sing 234 n n C15 H14 LYQ sing 235 n n N H15 LYQ sing 236 n n C17 H16 LYQ sing 237 n n C3 H17 LYQ sing 238 n n O H18 LYQ sing 239 n n C1 H19 LYQ sing 240 n n # _atom_sites.entry_id 8EV2 _atom_sites.fract_transf_matrix[1][1] 0.018531 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007127 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01223 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018298 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 LYQ A 1 601 6 LYQ M6C . F 3 LYQ A 1 602 8 LYQ M6C . G 4 WVE A 1 603 1 WVE M6A . H 4 WVE A 1 604 3 WVE M6A . I 3 LYQ B 1 601 7 LYQ M6C . J 3 LYQ B 1 602 9 LYQ M6C . K 4 WVE B 1 603 2 WVE M6A . L 4 WVE B 1 604 4 WVE M6A . M 5 HOH A 1 701 30 HOH HOH . M 5 HOH A 2 702 29 HOH HOH . M 5 HOH A 3 703 16 HOH HOH . M 5 HOH A 4 704 7 HOH HOH . M 5 HOH A 5 705 23 HOH HOH . M 5 HOH A 6 706 17 HOH HOH . M 5 HOH A 7 707 51 HOH HOH . M 5 HOH A 8 708 44 HOH HOH . M 5 HOH A 9 709 2 HOH HOH . M 5 HOH A 10 710 67 HOH HOH . M 5 HOH A 11 711 12 HOH HOH . M 5 HOH A 12 712 48 HOH HOH . M 5 HOH A 13 713 40 HOH HOH . M 5 HOH A 14 714 42 HOH HOH . M 5 HOH A 15 715 9 HOH HOH . M 5 HOH A 16 716 47 HOH HOH . M 5 HOH A 17 717 41 HOH HOH . M 5 HOH A 18 718 1 HOH HOH . M 5 HOH A 19 719 45 HOH HOH . M 5 HOH A 20 720 62 HOH HOH . M 5 HOH A 21 721 43 HOH HOH . M 5 HOH A 22 722 21 HOH HOH . M 5 HOH A 23 723 11 HOH HOH . M 5 HOH A 24 724 3 HOH HOH . M 5 HOH A 25 725 60 HOH HOH . M 5 HOH A 26 726 28 HOH HOH . M 5 HOH A 27 727 26 HOH HOH . M 5 HOH A 28 728 78 HOH HOH . M 5 HOH A 29 729 19 HOH HOH . M 5 HOH A 30 730 13 HOH HOH . M 5 HOH A 31 731 14 HOH HOH . M 5 HOH A 32 732 69 HOH HOH . M 5 HOH A 33 733 24 HOH HOH . M 5 HOH A 34 734 61 HOH HOH . M 5 HOH A 35 735 53 HOH HOH . M 5 HOH A 36 736 54 HOH HOH . M 5 HOH A 37 737 27 HOH HOH . M 5 HOH A 38 738 35 HOH HOH . M 5 HOH A 39 739 36 HOH HOH . M 5 HOH A 40 740 70 HOH HOH . M 5 HOH A 41 741 52 HOH HOH . M 5 HOH A 42 742 49 HOH HOH . M 5 HOH A 43 743 15 HOH HOH . M 5 HOH A 44 744 38 HOH HOH . M 5 HOH A 45 745 37 HOH HOH . N 5 HOH B 1 701 68 HOH HOH . N 5 HOH B 2 702 4 HOH HOH . N 5 HOH B 3 703 65 HOH HOH . N 5 HOH B 4 704 6 HOH HOH . N 5 HOH B 5 705 31 HOH HOH . N 5 HOH B 6 706 71 HOH HOH . N 5 HOH B 7 707 8 HOH HOH . N 5 HOH B 8 708 5 HOH HOH . N 5 HOH B 9 709 18 HOH HOH . N 5 HOH B 10 710 32 HOH HOH . N 5 HOH B 11 711 57 HOH HOH . N 5 HOH B 12 712 10 HOH HOH . N 5 HOH B 13 713 46 HOH HOH . N 5 HOH B 14 714 39 HOH HOH . N 5 HOH B 15 715 33 HOH HOH . N 5 HOH B 16 716 34 HOH HOH . N 5 HOH B 17 717 25 HOH HOH . N 5 HOH B 18 718 77 HOH HOH . N 5 HOH B 19 719 58 HOH HOH . N 5 HOH B 20 720 74 HOH HOH . N 5 HOH B 21 721 56 HOH HOH . N 5 HOH B 22 722 50 HOH HOH . N 5 HOH B 23 723 64 HOH HOH . N 5 HOH B 24 724 20 HOH HOH . O 5 HOH C 1 601 55 HOH HOH . O 5 HOH C 2 602 66 HOH HOH . P 5 HOH D 1 601 63 HOH HOH . P 5 HOH D 2 602 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 LYQ . B . E 3 -2.133 2.265 25.204 0.34 28.79 ? C4 LYQ 601 A 1 HETATM 2 C C5 LYQ . B . E 3 -1.592 2.114 23.974 0.34 32.17 ? C5 LYQ 601 A 1 HETATM 3 C C6 LYQ . B . E 3 -2.557 1.58 22.908 0.34 34.1 ? C6 LYQ 601 A 1 HETATM 4 N N1 LYQ . B . E 3 -8.036 -1.446 19.52 0.34 40.09 ? N1 LYQ 601 A 1 HETATM 5 C C7 LYQ . B . E 3 -2.043 0.69 21.75 0.34 35.02 ? C7 LYQ 601 A 1 HETATM 6 C C8 LYQ . B . E 3 -3.252 0.198 20.914 0.34 35.65 ? C8 LYQ 601 A 1 HETATM 7 C C9 LYQ . B . E 3 -2.806 0.432 19.491 0.34 36.1 ? C9 LYQ 601 A 1 HETATM 8 C C10 LYQ . B . E 3 -1.524 0.812 19.433 0.34 37.16 ? C10 LYQ 601 A 1 HETATM 9 C C11 LYQ . B . E 3 -1.07 1.368 20.754 0.34 37.04 ? C11 LYQ 601 A 1 HETATM 10 C C12 LYQ . B . E 3 -4.582 0.835 21.262 0.34 38.01 ? C12 LYQ 601 A 1 HETATM 11 C C13 LYQ . B . E 3 -4.67 1.961 22.001 0.34 37.16 ? C13 LYQ 601 A 1 HETATM 12 C C14 LYQ . B . E 3 -5.88 2.481 22.289 0.34 36.91 ? C14 LYQ 601 A 1 HETATM 13 C C15 LYQ . B . E 3 -7.006 1.902 21.819 0.34 37.12 ? C15 LYQ 601 A 1 HETATM 14 O O2 LYQ . B . E 3 -9.049 0.498 19.226 0.34 38.47 ? O2 LYQ 601 A 1 HETATM 15 S S LYQ . B . E 3 -8.382 -0.041 20.419 0.34 41.06 ? S LYQ 601 A 1 HETATM 16 O O1 LYQ . B . E 3 -9.093 -0.896 21.369 0.34 37.99 ? O1 LYQ 601 A 1 HETATM 17 C C16 LYQ . B . E 3 -6.928 0.789 21.065 0.34 38.2 ? C16 LYQ 601 A 1 HETATM 18 N N LYQ . B . E 3 -3.617 2.502 22.465 0.34 37.11 ? N LYQ 601 A 1 HETATM 19 C C17 LYQ . B . E 3 -5.714 0.273 20.803 0.34 38.72 ? C17 LYQ 601 A 1 HETATM 20 C C LYQ . B . E 3 -0.27 2.411 23.865 0.34 32.72 ? C LYQ 601 A 1 HETATM 21 CL CL LYQ . B . E 3 0.694 2.301 22.429 0.34 36.38 ? CL LYQ 601 A 1 HETATM 22 C C3 LYQ . B . E 3 -1.44 2.705 26.264 0.34 26.95 ? C3 LYQ 601 A 1 HETATM 23 C C2 LYQ . B . E 3 -0.144 3.013 26.144 0.34 27.28 ? C2 LYQ 601 A 1 HETATM 24 O O LYQ . B . E 3 0.591 3.457 27.194 0.34 25.88 ? O LYQ 601 A 1 HETATM 25 C C1 LYQ . B . E 3 0.414 2.849 24.935 0.34 30.28 ? C1 LYQ 601 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 25 #