data_8EVE
#
_model_server_result.job_id            FWoL-gakD9FHUDMT5pORtA 
_model_server_result.datetime_utc      '2025-01-12 15:06:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8eve 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":506}' 
#
_entry.id    8EVE 
#
_exptl.entry_id    8EVE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8EVE 
_cell.length_a            98.99 
_cell.length_b            98.99 
_cell.length_c            81.47 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8EVE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 I N N 
? 7 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B O3' DT 3 T DT 3 1_555 B P X6H 4 T X6H 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.608 ? 
covale ? covale2 B O3' X6H 4 T X6H 4 1_555 B P DA 5 T DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.594 ? 
metalc ? metalc1 A O ALA 217 A ALA 214 1_555 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.105 ? 
metalc ? metalc2 A O CYS 230 A CYS 227 1_555 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? 
metalc ? metalc3 A O ASN 233 A ASN 230 1_555 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? 
metalc ? metalc4 A OG1 THR 239 A THR 236 1_555 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? 
hydrog WATSON-CRICK hydrog1 B N1 DA 5 T DA 5 1_555 C N3 DT 8 P DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 B N6 DA 5 T DA 5 1_555 C O4 DT 8 P DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 B N3 DT 6 T DT 6 1_555 C N1 DA 7 P DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 B O4 DT 6 T DT 6 1_555 C N6 DA 7 P DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 B N1 DG 7 T DG 7 1_555 C N3 DC 6 P DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 B N2 DG 7 T DG 7 1_555 C O2 DC 6 P DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 B O6 DG 7 T DG 7 1_555 C N4 DC 6 P DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 B N1 DA 8 T DA 8 1_555 C N3 DT 5 P DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 B N6 DA 8 T DA 8 1_555 C O4 DT 5 P DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 B N3 DC 9 T DC 9 1_555 C N1 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 B N4 DC 9 T DC 9 1_555 C O6 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 B O2 DC 9 T DC 9 1_555 C N2 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 B N1 DG 10 T DG 10 1_555 C N3 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 B N2 DG 10 T DG 10 1_555 C O2 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 B O6 DG 10 T DG 10 1_555 C N4 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 B N3 DC 11 T DC 11 1_555 C N1 DG 2 P DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 B N4 DC 11 T DC 11 1_555 C O6 DG 2 P DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 B O2 DC 11 T DC 11 1_555 C N2 DG 2 P DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 B N3 DT 12 T DT 12 1_555 C N1 DA 1 P DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog20 B O4 DT 12 T DT 12 1_555 C N6 DA 1 P DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 232 n n 
C1 C2 EDO sing 233 n n 
C1 H11 EDO sing 234 n n 
C1 H12 EDO sing 235 n n 
O1 HO1 EDO sing 236 n n 
C2 O2 EDO sing 237 n n 
C2 H21 EDO sing 238 n n 
C2 H22 EDO sing 239 n n 
O2 HO2 EDO sing 240 n n 
#
_atom_sites.entry_id                     8EVE 
_atom_sites.fract_transf_matrix[1][1]    0.010102 
_atom_sites.fract_transf_matrix[1][2]    0.005832 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011665 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012274 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 CA A 1 501 1 CA CA . 
E 4 CA A 1 502 2 CA CA . 
F 4 CA A 1 503 3 CA CA . 
G 5 GOL A 1 504 4 GOL GOL . 
H 6 PEG A 1 505 5 PEG PEG . 
I 7 EDO A 1 506 6 EDO EDO . 
J 7 EDO A 1 507 7 EDO EDO . 
K 8 HOH A 1 601 45 HOH HOH . 
K 8 HOH A 2 602 64 HOH HOH . 
K 8 HOH A 3 603 29 HOH HOH . 
K 8 HOH A 4 604 32 HOH HOH . 
K 8 HOH A 5 605 75 HOH HOH . 
K 8 HOH A 6 606 93 HOH HOH . 
K 8 HOH A 7 607 56 HOH HOH . 
K 8 HOH A 8 608 52 HOH HOH . 
K 8 HOH A 9 609 73 HOH HOH . 
K 8 HOH A 10 610 97 HOH HOH . 
K 8 HOH A 11 611 76 HOH HOH . 
K 8 HOH A 12 612 21 HOH HOH . 
K 8 HOH A 13 613 37 HOH HOH . 
K 8 HOH A 14 614 80 HOH HOH . 
K 8 HOH A 15 615 99 HOH HOH . 
K 8 HOH A 16 616 17 HOH HOH . 
K 8 HOH A 17 617 38 HOH HOH . 
K 8 HOH A 18 618 95 HOH HOH . 
K 8 HOH A 19 619 74 HOH HOH . 
K 8 HOH A 20 620 10 HOH HOH . 
K 8 HOH A 21 621 89 HOH HOH . 
K 8 HOH A 22 622 28 HOH HOH . 
K 8 HOH A 23 623 85 HOH HOH . 
K 8 HOH A 24 624 18 HOH HOH . 
K 8 HOH A 25 625 100 HOH HOH . 
K 8 HOH A 26 626 24 HOH HOH . 
K 8 HOH A 27 627 9 HOH HOH . 
K 8 HOH A 28 628 44 HOH HOH . 
K 8 HOH A 29 629 66 HOH HOH . 
K 8 HOH A 30 630 86 HOH HOH . 
K 8 HOH A 31 631 54 HOH HOH . 
K 8 HOH A 32 632 43 HOH HOH . 
K 8 HOH A 33 633 51 HOH HOH . 
K 8 HOH A 34 634 82 HOH HOH . 
K 8 HOH A 35 635 62 HOH HOH . 
K 8 HOH A 36 636 55 HOH HOH . 
K 8 HOH A 37 637 12 HOH HOH . 
K 8 HOH A 38 638 87 HOH HOH . 
K 8 HOH A 39 639 88 HOH HOH . 
K 8 HOH A 40 640 11 HOH HOH . 
K 8 HOH A 41 641 94 HOH HOH . 
K 8 HOH A 42 642 46 HOH HOH . 
K 8 HOH A 43 643 83 HOH HOH . 
K 8 HOH A 44 644 25 HOH HOH . 
K 8 HOH A 45 645 98 HOH HOH . 
K 8 HOH A 46 646 90 HOH HOH . 
K 8 HOH A 47 647 58 HOH HOH . 
K 8 HOH A 48 648 33 HOH HOH . 
K 8 HOH A 49 649 27 HOH HOH . 
K 8 HOH A 50 650 84 HOH HOH . 
K 8 HOH A 51 651 41 HOH HOH . 
K 8 HOH A 52 652 49 HOH HOH . 
K 8 HOH A 53 653 31 HOH HOH . 
K 8 HOH A 54 654 40 HOH HOH . 
K 8 HOH A 55 655 42 HOH HOH . 
K 8 HOH A 56 656 67 HOH HOH . 
K 8 HOH A 57 657 96 HOH HOH . 
K 8 HOH A 58 658 53 HOH HOH . 
K 8 HOH A 59 659 35 HOH HOH . 
K 8 HOH A 60 660 30 HOH HOH . 
K 8 HOH A 61 661 48 HOH HOH . 
K 8 HOH A 62 662 8 HOH HOH . 
K 8 HOH A 63 663 26 HOH HOH . 
K 8 HOH A 64 664 39 HOH HOH . 
K 8 HOH A 65 665 77 HOH HOH . 
K 8 HOH A 66 666 79 HOH HOH . 
K 8 HOH A 67 667 14 HOH HOH . 
K 8 HOH A 68 668 13 HOH HOH . 
K 8 HOH A 69 669 19 HOH HOH . 
K 8 HOH A 70 670 47 HOH HOH . 
K 8 HOH A 71 671 60 HOH HOH . 
K 8 HOH A 72 672 70 HOH HOH . 
K 8 HOH A 73 673 36 HOH HOH . 
K 8 HOH A 74 674 20 HOH HOH . 
K 8 HOH A 75 675 34 HOH HOH . 
K 8 HOH A 76 676 71 HOH HOH . 
K 8 HOH A 77 677 22 HOH HOH . 
K 8 HOH A 78 678 61 HOH HOH . 
K 8 HOH A 79 679 23 HOH HOH . 
K 8 HOH A 80 680 72 HOH HOH . 
K 8 HOH A 81 681 78 HOH HOH . 
K 8 HOH A 82 682 65 HOH HOH . 
L 8 HOH T 1 101 81 HOH HOH . 
L 8 HOH T 2 102 92 HOH HOH . 
L 8 HOH T 3 103 50 HOH HOH . 
L 8 HOH T 4 104 69 HOH HOH . 
L 8 HOH T 5 105 63 HOH HOH . 
L 8 HOH T 6 106 57 HOH HOH . 
M 8 HOH P 1 101 59 HOH HOH . 
M 8 HOH P 2 102 91 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . I 7 34.67 -2.495 -13.205 1 48.94 ? C1 EDO 506 A 1 
HETATM 2 O O1 EDO . . . I 7 35.964 -2.059 -12.763 1 46.07 ? O1 EDO 506 A 1 
HETATM 3 C C2 EDO . . . I 7 33.613 -1.46 -12.807 1 53.42 ? C2 EDO 506 A 1 
HETATM 4 O O2 EDO . . . I 7 32.279 -1.993 -12.917 1 47.99 ? O2 EDO 506 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           348 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#