data_8EVK # _model_server_result.job_id FDcF42R285mn51SFGu6XGg _model_server_result.datetime_utc '2024-11-08 12:35:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8evk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 8EVK # _exptl.entry_id 8EVK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8EVK _cell.length_a 68.081 _cell.length_b 68.081 _cell.length_c 57.404 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EVK _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall 'I 4' _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8EVK _atom_sites.fract_transf_matrix[1][1] 0.014688 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014688 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PE0 A 1 201 201 PE0 PE0 . C 3 EDO A 1 202 202 EDO EDO . D 4 HOH A 1 301 93 HOH HOH . D 4 HOH A 2 302 125 HOH HOH . D 4 HOH A 3 303 45 HOH HOH . D 4 HOH A 4 304 104 HOH HOH . D 4 HOH A 5 305 83 HOH HOH . D 4 HOH A 6 306 72 HOH HOH . D 4 HOH A 7 307 54 HOH HOH . D 4 HOH A 8 308 73 HOH HOH . D 4 HOH A 9 309 25 HOH HOH . D 4 HOH A 10 310 12 HOH HOH . D 4 HOH A 11 311 100 HOH HOH . D 4 HOH A 12 312 14 HOH HOH . D 4 HOH A 13 313 133 HOH HOH . D 4 HOH A 14 314 65 HOH HOH . D 4 HOH A 15 315 17 HOH HOH . D 4 HOH A 16 316 33 HOH HOH . D 4 HOH A 17 317 130 HOH HOH . D 4 HOH A 18 318 53 HOH HOH . D 4 HOH A 19 319 110 HOH HOH . D 4 HOH A 20 320 10 HOH HOH . D 4 HOH A 21 321 37 HOH HOH . D 4 HOH A 22 322 22 HOH HOH . D 4 HOH A 23 323 132 HOH HOH . D 4 HOH A 24 324 75 HOH HOH . D 4 HOH A 25 325 26 HOH HOH . D 4 HOH A 26 326 124 HOH HOH . D 4 HOH A 27 327 63 HOH HOH . D 4 HOH A 28 328 43 HOH HOH . D 4 HOH A 29 329 57 HOH HOH . D 4 HOH A 30 330 71 HOH HOH . D 4 HOH A 31 331 86 HOH HOH . D 4 HOH A 32 332 8 HOH HOH . D 4 HOH A 33 333 79 HOH HOH . D 4 HOH A 34 334 21 HOH HOH . D 4 HOH A 35 335 18 HOH HOH . D 4 HOH A 36 336 16 HOH HOH . D 4 HOH A 37 337 55 HOH HOH . D 4 HOH A 38 338 34 HOH HOH . D 4 HOH A 39 339 42 HOH HOH . D 4 HOH A 40 340 88 HOH HOH . D 4 HOH A 41 341 19 HOH HOH . D 4 HOH A 42 342 32 HOH HOH . D 4 HOH A 43 343 30 HOH HOH . D 4 HOH A 44 344 114 HOH HOH . D 4 HOH A 45 345 7 HOH HOH . D 4 HOH A 46 346 20 HOH HOH . D 4 HOH A 47 347 6 HOH HOH . D 4 HOH A 48 348 105 HOH HOH . D 4 HOH A 49 349 27 HOH HOH . D 4 HOH A 50 350 69 HOH HOH . D 4 HOH A 51 351 31 HOH HOH . D 4 HOH A 52 352 24 HOH HOH . D 4 HOH A 53 353 56 HOH HOH . D 4 HOH A 54 354 81 HOH HOH . D 4 HOH A 55 355 13 HOH HOH . D 4 HOH A 56 356 61 HOH HOH . D 4 HOH A 57 357 94 HOH HOH . D 4 HOH A 58 358 74 HOH HOH . D 4 HOH A 59 359 3 HOH HOH . D 4 HOH A 60 360 11 HOH HOH . D 4 HOH A 61 361 98 HOH HOH . D 4 HOH A 62 362 15 HOH HOH . D 4 HOH A 63 363 44 HOH HOH . D 4 HOH A 64 364 40 HOH HOH . D 4 HOH A 65 365 116 HOH HOH . D 4 HOH A 66 366 39 HOH HOH . D 4 HOH A 67 367 9 HOH HOH . D 4 HOH A 68 368 95 HOH HOH . D 4 HOH A 69 369 78 HOH HOH . D 4 HOH A 70 370 91 HOH HOH . D 4 HOH A 71 371 120 HOH HOH . D 4 HOH A 72 372 103 HOH HOH . D 4 HOH A 73 373 126 HOH HOH . D 4 HOH A 74 374 5 HOH HOH . D 4 HOH A 75 375 1 HOH HOH . D 4 HOH A 76 376 38 HOH HOH . D 4 HOH A 77 377 41 HOH HOH . D 4 HOH A 78 378 109 HOH HOH . D 4 HOH A 79 379 62 HOH HOH . D 4 HOH A 80 380 68 HOH HOH . D 4 HOH A 81 381 76 HOH HOH . D 4 HOH A 82 382 108 HOH HOH . D 4 HOH A 83 383 49 HOH HOH . D 4 HOH A 84 384 134 HOH HOH . D 4 HOH A 85 385 60 HOH HOH . D 4 HOH A 86 386 127 HOH HOH . D 4 HOH A 87 387 70 HOH HOH . D 4 HOH A 88 388 106 HOH HOH . D 4 HOH A 89 389 102 HOH HOH . D 4 HOH A 90 390 36 HOH HOH . D 4 HOH A 91 391 122 HOH HOH . D 4 HOH A 92 392 119 HOH HOH . D 4 HOH A 93 393 23 HOH HOH . D 4 HOH A 94 394 67 HOH HOH . D 4 HOH A 95 395 111 HOH HOH . D 4 HOH A 96 396 77 HOH HOH . D 4 HOH A 97 397 97 HOH HOH . D 4 HOH A 98 398 52 HOH HOH . D 4 HOH A 99 399 129 HOH HOH . D 4 HOH A 100 400 80 HOH HOH . D 4 HOH A 101 401 29 HOH HOH . D 4 HOH A 102 402 117 HOH HOH . D 4 HOH A 103 403 99 HOH HOH . D 4 HOH A 104 404 59 HOH HOH . D 4 HOH A 105 405 4 HOH HOH . D 4 HOH A 106 406 101 HOH HOH . D 4 HOH A 107 407 131 HOH HOH . D 4 HOH A 108 408 112 HOH HOH . D 4 HOH A 109 409 118 HOH HOH . D 4 HOH A 110 410 90 HOH HOH . D 4 HOH A 111 411 28 HOH HOH . D 4 HOH A 112 412 51 HOH HOH . D 4 HOH A 113 413 96 HOH HOH . D 4 HOH A 114 414 58 HOH HOH . D 4 HOH A 115 415 87 HOH HOH . D 4 HOH A 116 416 35 HOH HOH . D 4 HOH A 117 417 128 HOH HOH . D 4 HOH A 118 418 2 HOH HOH . D 4 HOH A 119 419 89 HOH HOH . D 4 HOH A 120 420 121 HOH HOH . D 4 HOH A 121 421 92 HOH HOH . D 4 HOH A 122 422 115 HOH HOH . D 4 HOH A 123 423 84 HOH HOH . D 4 HOH A 124 424 50 HOH HOH . D 4 HOH A 125 425 82 HOH HOH . D 4 HOH A 126 426 113 HOH HOH . D 4 HOH A 127 427 123 HOH HOH . D 4 HOH A 128 428 48 HOH HOH . D 4 HOH A 129 429 85 HOH HOH . D 4 HOH A 130 430 66 HOH HOH . D 4 HOH A 131 431 46 HOH HOH . D 4 HOH A 132 432 47 HOH HOH . D 4 HOH A 133 433 64 HOH HOH . D 4 HOH A 134 434 107 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 -18.673 20.501 -12.45 1 48.27 ? C1 EDO 202 A 1 HETATM 2 O O1 EDO . . . C 3 -17.498 20.165 -13.193 1 48.78 ? O1 EDO 202 A 1 HETATM 3 C C2 EDO . . . C 3 -18.93 19.408 -11.418 1 47.59 ? C2 EDO 202 A 1 HETATM 4 O O2 EDO . . . C 3 -20.256 18.915 -11.6 1 55.73 ? O2 EDO 202 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #