data_8EVU # _model_server_result.job_id 6r3Xv7UQkt9BGpdOtVCOtQ _model_server_result.datetime_utc '2024-10-11 21:52:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8evu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":600}' # _entry.id 8EVU # _exptl.entry_id 8EVU _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 456.344 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8EVU _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EVU _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B OG1 THR 236 B THR 236 1_555 G P FMN . B FMN 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale2 C OG1 THR 225 C THR 225 1_555 J P FMN . C FMN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? metalc ? metalc1 D SG CYS 29 D CYS 29 1_555 K FE2 FES . E FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc2 D SG CYS 112 D CYS 112 1_555 K FE1 FES . E FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc3 E SG CYS 26 E CYS 26 1_555 K FE1 FES . E FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc4 E SG CYS 120 E CYS 120 1_555 K FE2 FES . E FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # _atom_sites.entry_id 8EVU _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 FMN B 1 600 600 FMN FMN . H 8 RBF B 1 601 601 RBF RBF . I 9 UQ1 B 1 602 602 UQ1 UQ1 . J 7 FMN C 1 301 301 FMN FMN . K 10 FES E 1 301 301 FES FES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . G 7 177.493 194.329 216.206 1 45.78 ? N1 FMN 600 B 1 HETATM 2 C C2 FMN . . . G 7 178.178 193.211 215.885 1 43.2 ? C2 FMN 600 B 1 HETATM 3 O O2 FMN . . . G 7 178.612 192.462 216.761 1 46.7 ? O2 FMN 600 B 1 HETATM 4 N N3 FMN . . . G 7 178.417 192.859 214.596 1 32.95 ? N3 FMN 600 B 1 HETATM 5 C C4 FMN . . . G 7 177.979 193.621 213.543 1 37.55 ? C4 FMN 600 B 1 HETATM 6 O O4 FMN . . . G 7 178.216 193.266 212.398 1 48.96 ? O4 FMN 600 B 1 HETATM 7 C C4A FMN . . . G 7 177.262 194.794 213.835 1 37.62 ? C4A FMN 600 B 1 HETATM 8 N N5 FMN . . . G 7 176.831 195.529 212.844 1 40.41 ? N5 FMN 600 B 1 HETATM 9 C C5A FMN . . . G 7 176.134 196.665 213.157 1 40.45 ? C5A FMN 600 B 1 HETATM 10 C C6 FMN . . . G 7 175.665 197.467 212.103 1 39.54 ? C6 FMN 600 B 1 HETATM 11 C C7 FMN . . . G 7 174.955 198.62 212.34 1 39.22 ? C7 FMN 600 B 1 HETATM 12 C C7M FMN . . . G 7 174.465 199.455 211.186 1 34.2 ? C7M FMN 600 B 1 HETATM 13 C C8 FMN . . . G 7 174.694 199.012 213.673 1 42.7 ? C8 FMN 600 B 1 HETATM 14 C C8M FMN . . . G 7 173.918 200.272 213.959 1 32.04 ? C8M FMN 600 B 1 HETATM 15 C C9 FMN . . . G 7 175.146 198.232 214.717 1 36.33 ? C9 FMN 600 B 1 HETATM 16 C C9A FMN . . . G 7 175.867 197.05 214.485 1 34.45 ? C9A FMN 600 B 1 HETATM 17 N N10 FMN . . . G 7 176.352 196.243 215.512 1 33.79 ? N10 FMN 600 B 1 HETATM 18 C C10 FMN . . . G 7 177.055 195.09 215.227 1 38.78 ? C10 FMN 600 B 1 HETATM 19 C C1' FMN . . . G 7 176.089 196.592 216.918 1 39.36 ? C1' FMN 600 B 1 HETATM 20 C C2' FMN . . . G 7 174.793 195.989 217.423 1 38.95 ? C2' FMN 600 B 1 HETATM 21 O O2' FMN . . . G 7 173.698 196.41 216.619 1 45.78 ? O2' FMN 600 B 1 HETATM 22 C C3' FMN . . . G 7 174.542 196.406 218.871 1 37.87 ? C3' FMN 600 B 1 HETATM 23 O O3' FMN . . . G 7 175.11 197.689 219.079 1 54.6 ? O3' FMN 600 B 1 HETATM 24 C C4' FMN . . . G 7 175.219 195.45 219.853 1 34.95 ? C4' FMN 600 B 1 HETATM 25 O O4' FMN . . . G 7 174.926 194.1 219.487 1 45.67 ? O4' FMN 600 B 1 HETATM 26 C C5' FMN . . . G 7 174.788 195.693 221.28 1 38.9 ? C5' FMN 600 B 1 HETATM 27 O O5' FMN . . . G 7 173.4 195.304 221.453 1 49.93 ? O5' FMN 600 B 1 HETATM 28 P P FMN . . . G 7 173.071 193.811 221.962 1 55.43 ? P FMN 600 B 1 HETATM 29 O O1P FMN . . . G 7 174.106 192.881 221.367 1 46.58 ? O1P FMN 600 B 1 HETATM 30 O O2P FMN . . . G 7 171.658 193.507 221.522 1 48.15 ? O2P FMN 600 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 30 #