data_8EWH # _model_server_result.job_id sOETsmuSbQgbP3Vxd4KlZg _model_server_result.datetime_utc '2025-03-05 18:08:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ewh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 8EWH # _exptl.entry_id 8EWH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.77 _cell.angle_gamma 90 _cell.entry_id 8EWH _cell.length_a 89.414 _cell.length_b 83.702 _cell.length_c 95.408 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EWH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ILE 284 A ILE 284 1_555 C NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.945 ? metalc ? metalc2 A OG SER 285 A SER 285 1_555 C NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? metalc ? metalc3 A OD1 ASP 286 A ASP 286 1_555 C NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc4 A OG1 THR 306 A THR 306 1_555 D NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.891 ? metalc ? metalc5 A OE2 GLU 401 A GLU 401 1_555 D NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.129 ? metalc ? metalc6 B O ILE 284 B ILE 284 1_555 E NA NA . B NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? metalc ? metalc7 B OG SER 285 B SER 285 1_555 E NA NA . B NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.89 ? metalc ? metalc8 B OD1 ASP 286 B ASP 286 1_555 E NA NA . B NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? metalc ? metalc9 B OG1 THR 306 B THR 306 1_555 F NA NA . B NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc10 B OE2 GLU 401 B GLU 401 1_555 F NA NA . B NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.16 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8EWH _atom_sites.fract_transf_matrix[1][1] 0.011184 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003158 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011947 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010891 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 701 1 NA NA . D 2 NA A 1 702 3 NA NA . E 2 NA B 1 701 2 NA NA . F 2 NA B 1 702 4 NA NA . G 3 HOH A 1 801 2 HOH HOH . G 3 HOH A 2 802 87 HOH HOH . G 3 HOH A 3 803 98 HOH HOH . G 3 HOH A 4 804 14 HOH HOH . G 3 HOH A 5 805 11 HOH HOH . G 3 HOH A 6 806 86 HOH HOH . G 3 HOH A 7 807 106 HOH HOH . G 3 HOH A 8 808 105 HOH HOH . G 3 HOH A 9 809 46 HOH HOH . G 3 HOH A 10 810 58 HOH HOH . G 3 HOH A 11 811 51 HOH HOH . G 3 HOH A 12 812 104 HOH HOH . G 3 HOH A 13 813 8 HOH HOH . G 3 HOH A 14 814 56 HOH HOH . G 3 HOH A 15 815 43 HOH HOH . G 3 HOH A 16 816 19 HOH HOH . G 3 HOH A 17 817 29 HOH HOH . G 3 HOH A 18 818 59 HOH HOH . G 3 HOH A 19 819 83 HOH HOH . G 3 HOH A 20 820 44 HOH HOH . G 3 HOH A 21 821 34 HOH HOH . G 3 HOH A 22 822 102 HOH HOH . G 3 HOH A 23 823 67 HOH HOH . G 3 HOH A 24 824 107 HOH HOH . G 3 HOH A 25 825 1 HOH HOH . G 3 HOH A 26 826 32 HOH HOH . G 3 HOH A 27 827 64 HOH HOH . G 3 HOH A 28 828 92 HOH HOH . G 3 HOH A 29 829 68 HOH HOH . G 3 HOH A 30 830 79 HOH HOH . G 3 HOH A 31 831 85 HOH HOH . G 3 HOH A 32 832 52 HOH HOH . G 3 HOH A 33 833 41 HOH HOH . G 3 HOH A 34 834 101 HOH HOH . G 3 HOH A 35 835 5 HOH HOH . G 3 HOH A 36 836 100 HOH HOH . G 3 HOH A 37 837 26 HOH HOH . G 3 HOH A 38 838 84 HOH HOH . G 3 HOH A 39 839 77 HOH HOH . G 3 HOH A 40 840 54 HOH HOH . G 3 HOH A 41 841 45 HOH HOH . G 3 HOH A 42 842 30 HOH HOH . G 3 HOH A 43 843 33 HOH HOH . G 3 HOH A 44 844 35 HOH HOH . G 3 HOH A 45 845 73 HOH HOH . G 3 HOH A 46 846 76 HOH HOH . G 3 HOH A 47 847 88 HOH HOH . G 3 HOH A 48 848 24 HOH HOH . G 3 HOH A 49 849 17 HOH HOH . G 3 HOH A 50 850 36 HOH HOH . G 3 HOH A 51 851 39 HOH HOH . G 3 HOH A 52 852 48 HOH HOH . G 3 HOH A 53 853 63 HOH HOH . G 3 HOH A 54 854 94 HOH HOH . G 3 HOH A 55 855 31 HOH HOH . G 3 HOH A 56 856 71 HOH HOH . G 3 HOH A 57 857 66 HOH HOH . G 3 HOH A 58 858 10 HOH HOH . G 3 HOH A 59 859 28 HOH HOH . G 3 HOH A 60 860 55 HOH HOH . G 3 HOH A 61 861 22 HOH HOH . G 3 HOH A 62 862 53 HOH HOH . G 3 HOH A 63 863 90 HOH HOH . G 3 HOH A 64 864 12 HOH HOH . G 3 HOH A 65 865 65 HOH HOH . G 3 HOH A 66 866 16 HOH HOH . G 3 HOH A 67 867 110 HOH HOH . G 3 HOH A 68 868 108 HOH HOH . G 3 HOH A 69 869 21 HOH HOH . G 3 HOH A 70 870 109 HOH HOH . H 3 HOH B 1 801 6 HOH HOH . H 3 HOH B 2 802 82 HOH HOH . H 3 HOH B 3 803 13 HOH HOH . H 3 HOH B 4 804 91 HOH HOH . H 3 HOH B 5 805 9 HOH HOH . H 3 HOH B 6 806 97 HOH HOH . H 3 HOH B 7 807 3 HOH HOH . H 3 HOH B 8 808 78 HOH HOH . H 3 HOH B 9 809 99 HOH HOH . H 3 HOH B 10 810 75 HOH HOH . H 3 HOH B 11 811 93 HOH HOH . H 3 HOH B 12 812 40 HOH HOH . H 3 HOH B 13 813 47 HOH HOH . H 3 HOH B 14 814 74 HOH HOH . H 3 HOH B 15 815 7 HOH HOH . H 3 HOH B 16 816 103 HOH HOH . H 3 HOH B 17 817 49 HOH HOH . H 3 HOH B 18 818 27 HOH HOH . H 3 HOH B 19 819 50 HOH HOH . H 3 HOH B 20 820 60 HOH HOH . H 3 HOH B 21 821 62 HOH HOH . H 3 HOH B 22 822 95 HOH HOH . H 3 HOH B 23 823 37 HOH HOH . H 3 HOH B 24 824 81 HOH HOH . H 3 HOH B 25 825 42 HOH HOH . H 3 HOH B 26 826 18 HOH HOH . H 3 HOH B 27 827 4 HOH HOH . H 3 HOH B 28 828 57 HOH HOH . H 3 HOH B 29 829 96 HOH HOH . H 3 HOH B 30 830 72 HOH HOH . H 3 HOH B 31 831 15 HOH HOH . H 3 HOH B 32 832 69 HOH HOH . H 3 HOH B 33 833 61 HOH HOH . H 3 HOH B 34 834 80 HOH HOH . H 3 HOH B 35 835 89 HOH HOH . H 3 HOH B 36 836 20 HOH HOH . H 3 HOH B 37 837 70 HOH HOH . H 3 HOH B 38 838 38 HOH HOH . H 3 HOH B 39 839 23 HOH HOH . H 3 HOH B 40 840 25 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 33.242 _atom_site.Cartn_y 63.532 _atom_site.Cartn_z 87.624 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.12 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 701 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #