data_8EY5
#
_model_server_result.job_id            LuAb6tpKhAobS3lo0o9DrA 
_model_server_result.datetime_utc      '2024-12-26 20:30:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ey5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":604}' 
#
_entry.id    8EY5 
#
_exptl.entry_id    8EY5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.933 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COBALT (II) ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.75 
_cell.angle_gamma         90 
_cell.entry_id            8EY5 
_cell.length_a            185.966 
_cell.length_b            38.548 
_cell.length_c            93.409 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8EY5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf2 A SG CYS 75 A CYS 75 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf3 A SG CYS 90 A CYS 90 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf4 A SG CYS 124 A CYS 124 1_555 A SG CYS 169 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf5 A SG CYS 168 A CYS 168 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf6 A SG CYS 200 A CYS 200 1_555 A SG CYS 246 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf7 A SG CYS 245 A CYS 245 1_555 A SG CYS 253 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
disulf ? disulf8 A SG CYS 265 A CYS 265 1_555 A SG CYS 279 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf9 A SG CYS 278 A CYS 278 1_555 A SG CYS 289 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf10 A SG CYS 316 A CYS 316 1_555 A SG CYS 361 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf11 A SG CYS 360 A CYS 360 1_555 A SG CYS 369 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf12 A SG CYS 392 A CYS 392 1_555 A SG CYS 438 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf13 A SG CYS 437 A CYS 437 1_555 A SG CYS 448 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf14 A SG CYS 461 A CYS 461 1_555 A SG CYS 477 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf15 A SG CYS 476 A CYS 476 1_555 A SG CYS 487 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
disulf ? disulf16 A SG CYS 514 A CYS 514 1_555 A SG CYS 559 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf17 A SG CYS 558 A CYS 558 1_555 A SG CYS 567 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc1 A NE2 HIS 9 A HIS 9 1_555 B CO CO . A CO 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? 
metalc ? metalc2 A OD2 ASP 13 A ASP 13 1_555 B CO CO . A CO 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc3 A NE2 HIS 128 A HIS 128 1_555 E CO CO . A CO 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc4 A OD1 ASP 256 A ASP 256 1_555 D CO CO . A CO 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? 
metalc ? metalc5 A NE2 HIS 288 A HIS 288 1_555 C CO CO . A CO 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc6 A OE2 GLU 292 A GLU 292 1_555 C CO CO . A CO 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc7 B CO CO . A CO 604 1_555 P O HOH . A HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc8 B CO CO . A CO 604 1_555 P O HOH . A HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
metalc ? metalc9 B CO CO . A CO 604 1_555 P O HOH . A HOH 2031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? 
metalc ? metalc10 B CO CO . A CO 604 1_555 P O HOH . A HOH 2032 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? 
metalc ? metalc11 C CO CO . A CO 606 1_555 P O HOH . A HOH 2025 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? 
metalc ? metalc12 C CO CO . A CO 606 1_555 P O HOH . A HOH 2034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.901 ? 
metalc ? metalc13 D CO CO . A CO 607 1_555 P O HOH . A HOH 2012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? 
metalc ? metalc14 D CO CO . A CO 607 1_555 P O HOH . A HOH 2013 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc15 D CO CO . A CO 607 1_555 P O HOH . A HOH 2014 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
metalc ? metalc16 E CO CO . A CO 609 1_555 P O HOH . A HOH 2027 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? 
metalc ? metalc17 E CO CO . A CO 609 1_555 P O HOH . A HOH 2028 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
metalc ? metalc18 E CO CO . A CO 609 1_555 P O HOH . A HOH 2029 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc19 E CO CO . A CO 609 1_555 P O HOH . A HOH 2030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
#
_chem_comp.formula           'Co 2' 
_chem_comp.formula_weight    58.933 
_chem_comp.id                CO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COBALT (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8EY5 
_atom_sites.fract_transf_matrix[1][1]    0.005377 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001316 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.025942 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011022 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CO A 1 604 604 CO CO . 
C 2 CO A 1 606 606 CO CO . 
D 2 CO A 1 607 607 CO CO . 
E 2 CO A 1 609 609 CO CO . 
F 2 CO A 1 611 611 CO CO . 
G 3 MYR A 1 1001 1001 MYR MYR . 
H 3 MYR A 1 1003 1003 MYR MYR . 
I 3 MYR A 1 1004 1004 MYR MYR . 
J 3 MYR A 1 1005 1005 MYR MYR . 
K 3 MYR A 1 1006 1006 MYR MYR . 
L 3 MYR A 1 1007 1007 MYR MYR . 
M 3 MYR A 1 1008 1008 MYR MYR . 
N 3 MYR A 1 1009 1009 MYR MYR . 
O 3 MYR A 1 1010 1010 MYR MYR . 
P 4 HOH A 1 2001 2001 HOH HOH . 
P 4 HOH A 2 2003 2003 HOH HOH . 
P 4 HOH A 3 2005 2005 HOH HOH . 
P 4 HOH A 4 2006 2006 HOH HOH . 
P 4 HOH A 5 2009 2009 HOH HOH . 
P 4 HOH A 6 2010 2010 HOH HOH . 
P 4 HOH A 7 2011 2011 HOH HOH . 
P 4 HOH A 8 2012 2012 HOH HOH . 
P 4 HOH A 9 2013 2013 HOH HOH . 
P 4 HOH A 10 2014 2014 HOH HOH . 
P 4 HOH A 11 2015 2015 HOH HOH . 
P 4 HOH A 12 2016 2016 HOH HOH . 
P 4 HOH A 13 2019 2019 HOH HOH . 
P 4 HOH A 14 2020 2020 HOH HOH . 
P 4 HOH A 15 2021 2021 HOH HOH . 
P 4 HOH A 16 2022 2022 HOH HOH . 
P 4 HOH A 17 2023 2023 HOH HOH . 
P 4 HOH A 18 2024 2024 HOH HOH . 
P 4 HOH A 19 2025 2025 HOH HOH . 
P 4 HOH A 20 2027 2027 HOH HOH . 
P 4 HOH A 21 2028 2028 HOH HOH . 
P 4 HOH A 22 2029 2029 HOH HOH . 
P 4 HOH A 23 2030 2030 HOH HOH . 
P 4 HOH A 24 2031 2031 HOH HOH . 
P 4 HOH A 25 2032 2032 HOH HOH . 
P 4 HOH A 26 2033 2033 HOH HOH . 
P 4 HOH A 27 2034 2034 HOH HOH . 
P 4 HOH A 28 2035 2035 HOH HOH . 
P 4 HOH A 29 2036 2036 HOH HOH . 
P 4 HOH A 30 2037 2037 HOH HOH . 
P 4 HOH A 31 2038 2038 HOH HOH . 
P 4 HOH A 32 2039 2039 HOH HOH . 
P 4 HOH A 33 2040 2040 HOH HOH . 
P 4 HOH A 34 2041 2041 HOH HOH . 
P 4 HOH A 35 2042 2042 HOH HOH . 
P 4 HOH A 36 2043 2043 HOH HOH . 
P 4 HOH A 37 2044 2044 HOH HOH . 
P 4 HOH A 38 2045 2045 HOH HOH . 
P 4 HOH A 39 2046 2046 HOH HOH . 
P 4 HOH A 40 2047 2047 HOH HOH . 
P 4 HOH A 41 2048 2048 HOH HOH . 
P 4 HOH A 42 2049 2049 HOH HOH . 
P 4 HOH A 43 2050 2050 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CO 
_atom_site.label_atom_id         CO 
_atom_site.label_comp_id         CO 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               53.739 
_atom_site.Cartn_y               27.695 
_atom_site.Cartn_z               10.583 
_atom_site.occupancy             0.8 
_atom_site.B_iso_or_equiv        152.67 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CO 
_atom_site.auth_comp_id          CO 
_atom_site.auth_seq_id           604 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           256 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#