data_8EYB
#
_model_server_result.job_id            3LyL2Z5jgWTtHXplKrbzuw 
_model_server_result.datetime_utc      '2024-11-16 11:02:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8eyb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    8EYB 
#
_exptl.entry_id    8EYB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8EYB 
_cell.length_a            88.381 
_cell.length_b            88.381 
_cell.length_c            190.335 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8EYB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,G 1 1 
B,D,F,H,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C GLU 7 D GLU 1162 1_555 C N PTR 8 D PTR 1163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale2 C C PTR 8 D PTR 1163 1_555 C N TYR 9 D TYR 1164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale3 D C GLU 7 E GLU 1162 1_555 D N PTR 8 E PTR 1163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale4 D C PTR 8 E PTR 1163 1_555 D N TYR 9 E TYR 1164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 363 n n 
C C2 TRS sing 364 n n 
C C3 TRS sing 365 n n 
C N TRS sing 366 n n 
C1 O1 TRS sing 367 n n 
C1 H11 TRS sing 368 n n 
C1 H12 TRS sing 369 n n 
C2 O2 TRS sing 370 n n 
C2 H21 TRS sing 371 n n 
C2 H22 TRS sing 372 n n 
C3 O3 TRS sing 373 n n 
C3 H31 TRS sing 374 n n 
C3 H32 TRS sing 375 n n 
N HN1 TRS sing 376 n n 
N HN2 TRS sing 377 n n 
N HN3 TRS sing 378 n n 
O1 HO1 TRS sing 379 n n 
O2 HO2 TRS sing 380 n n 
O3 HO3 TRS sing 381 n n 
#
_atom_sites.entry_id                     8EYB 
_atom_sites.fract_transf_matrix[1][1]    0.011315 
_atom_sites.fract_transf_matrix[1][2]    0.006533 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013065 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005254 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 TRS A 1 301 2 TRS TRS . 
F 3 TRS B 1 301 1 TRS TRS . 
G 4 HOH A 1 401 13 HOH HOH . 
G 4 HOH A 2 402 1 HOH HOH . 
G 4 HOH A 3 403 26 HOH HOH . 
G 4 HOH A 4 404 19 HOH HOH . 
G 4 HOH A 5 405 25 HOH HOH . 
G 4 HOH A 6 406 139 HOH HOH . 
G 4 HOH A 7 407 21 HOH HOH . 
G 4 HOH A 8 408 159 HOH HOH . 
G 4 HOH A 9 409 18 HOH HOH . 
G 4 HOH A 10 410 28 HOH HOH . 
G 4 HOH A 11 411 62 HOH HOH . 
G 4 HOH A 12 412 113 HOH HOH . 
G 4 HOH A 13 413 9 HOH HOH . 
G 4 HOH A 14 414 160 HOH HOH . 
G 4 HOH A 15 415 14 HOH HOH . 
G 4 HOH A 16 416 17 HOH HOH . 
G 4 HOH A 17 417 22 HOH HOH . 
G 4 HOH A 18 418 29 HOH HOH . 
G 4 HOH A 19 419 117 HOH HOH . 
G 4 HOH A 20 420 5 HOH HOH . 
G 4 HOH A 21 421 57 HOH HOH . 
G 4 HOH A 22 422 94 HOH HOH . 
G 4 HOH A 23 423 7 HOH HOH . 
G 4 HOH A 24 424 150 HOH HOH . 
G 4 HOH A 25 425 103 HOH HOH . 
G 4 HOH A 26 426 24 HOH HOH . 
G 4 HOH A 27 427 53 HOH HOH . 
G 4 HOH A 28 428 2 HOH HOH . 
G 4 HOH A 29 429 23 HOH HOH . 
G 4 HOH A 30 430 12 HOH HOH . 
G 4 HOH A 31 431 95 HOH HOH . 
G 4 HOH A 32 432 74 HOH HOH . 
G 4 HOH A 33 433 107 HOH HOH . 
G 4 HOH A 34 434 11 HOH HOH . 
G 4 HOH A 35 435 109 HOH HOH . 
G 4 HOH A 36 436 63 HOH HOH . 
G 4 HOH A 37 437 6 HOH HOH . 
G 4 HOH A 38 438 166 HOH HOH . 
G 4 HOH A 39 439 27 HOH HOH . 
G 4 HOH A 40 440 16 HOH HOH . 
G 4 HOH A 41 441 10 HOH HOH . 
G 4 HOH A 42 442 20 HOH HOH . 
G 4 HOH A 43 443 149 HOH HOH . 
G 4 HOH A 44 444 30 HOH HOH . 
G 4 HOH A 45 445 114 HOH HOH . 
G 4 HOH A 46 446 108 HOH HOH . 
G 4 HOH A 47 447 54 HOH HOH . 
G 4 HOH A 48 448 15 HOH HOH . 
G 4 HOH A 49 449 165 HOH HOH . 
G 4 HOH A 50 450 132 HOH HOH . 
G 4 HOH A 51 451 3 HOH HOH . 
G 4 HOH A 52 452 56 HOH HOH . 
G 4 HOH A 53 453 96 HOH HOH . 
G 4 HOH A 54 454 154 HOH HOH . 
G 4 HOH A 55 455 105 HOH HOH . 
G 4 HOH A 56 456 106 HOH HOH . 
G 4 HOH A 57 457 73 HOH HOH . 
G 4 HOH A 58 458 116 HOH HOH . 
G 4 HOH A 59 459 138 HOH HOH . 
G 4 HOH A 60 460 167 HOH HOH . 
H 4 HOH B 1 401 58 HOH HOH . 
H 4 HOH B 2 402 76 HOH HOH . 
H 4 HOH B 3 403 42 HOH HOH . 
H 4 HOH B 4 404 91 HOH HOH . 
H 4 HOH B 5 405 124 HOH HOH . 
H 4 HOH B 6 406 79 HOH HOH . 
H 4 HOH B 7 407 142 HOH HOH . 
H 4 HOH B 8 408 37 HOH HOH . 
H 4 HOH B 9 409 50 HOH HOH . 
H 4 HOH B 10 410 67 HOH HOH . 
H 4 HOH B 11 411 47 HOH HOH . 
H 4 HOH B 12 412 77 HOH HOH . 
H 4 HOH B 13 413 68 HOH HOH . 
H 4 HOH B 14 414 123 HOH HOH . 
H 4 HOH B 15 415 43 HOH HOH . 
H 4 HOH B 16 416 84 HOH HOH . 
H 4 HOH B 17 417 80 HOH HOH . 
H 4 HOH B 18 418 143 HOH HOH . 
H 4 HOH B 19 419 81 HOH HOH . 
H 4 HOH B 20 420 33 HOH HOH . 
H 4 HOH B 21 421 40 HOH HOH . 
H 4 HOH B 22 422 82 HOH HOH . 
H 4 HOH B 23 423 140 HOH HOH . 
H 4 HOH B 24 424 34 HOH HOH . 
H 4 HOH B 25 425 90 HOH HOH . 
H 4 HOH B 26 426 101 HOH HOH . 
H 4 HOH B 27 427 46 HOH HOH . 
H 4 HOH B 28 428 121 HOH HOH . 
H 4 HOH B 29 429 69 HOH HOH . 
H 4 HOH B 30 430 45 HOH HOH . 
H 4 HOH B 31 431 125 HOH HOH . 
H 4 HOH B 32 432 41 HOH HOH . 
H 4 HOH B 33 433 92 HOH HOH . 
H 4 HOH B 34 434 59 HOH HOH . 
H 4 HOH B 35 435 100 HOH HOH . 
H 4 HOH B 36 436 39 HOH HOH . 
H 4 HOH B 37 437 164 HOH HOH . 
H 4 HOH B 38 438 44 HOH HOH . 
H 4 HOH B 39 439 32 HOH HOH . 
H 4 HOH B 40 440 36 HOH HOH . 
H 4 HOH B 41 441 85 HOH HOH . 
H 4 HOH B 42 442 134 HOH HOH . 
H 4 HOH B 43 443 89 HOH HOH . 
H 4 HOH B 44 444 122 HOH HOH . 
H 4 HOH B 45 445 51 HOH HOH . 
H 4 HOH B 46 446 52 HOH HOH . 
H 4 HOH B 47 447 147 HOH HOH . 
H 4 HOH B 48 448 38 HOH HOH . 
H 4 HOH B 49 449 66 HOH HOH . 
H 4 HOH B 50 450 31 HOH HOH . 
H 4 HOH B 51 451 141 HOH HOH . 
H 4 HOH B 52 452 135 HOH HOH . 
H 4 HOH B 53 453 78 HOH HOH . 
I 4 HOH E 1 1201 99 HOH HOH . 
I 4 HOH E 2 1202 71 HOH HOH . 
I 4 HOH E 3 1203 168 HOH HOH . 
I 4 HOH E 4 1204 129 HOH HOH . 
I 4 HOH E 5 1205 128 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . E 3 -25.561 39.778 -27.14 1 63.22 ? C TRS 301 A 1 
HETATM 2 C C1 TRS . . . E 3 -25.728 41.224 -27.633 1 67.37 ? C1 TRS 301 A 1 
HETATM 3 C C2 TRS . . . E 3 -26.084 39.592 -25.719 1 69.07 ? C2 TRS 301 A 1 
HETATM 4 C C3 TRS . . . E 3 -24.09 39.43 -27.195 1 62.82 ? C3 TRS 301 A 1 
HETATM 5 N N TRS . . . E 3 -26.315 38.877 -28.126 1 71.17 ? N TRS 301 A 1 
HETATM 6 O O1 TRS . . . E 3 -24.815 42.068 -26.965 1 65.18 ? O1 TRS 301 A 1 
HETATM 7 O O2 TRS . . . E 3 -27.437 39.985 -25.643 1 68.57 ? O2 TRS 301 A 1 
HETATM 8 O O3 TRS . . . E 3 -23.601 39.944 -28.415 1 61.41 ? O3 TRS 301 A 1 
HETATM 9 H H11 TRS . . . E 3 -26.747 41.562 -27.444 1 80.82 ? H11 TRS 301 A 1 
HETATM 10 H H12 TRS . . . E 3 -25.554 41.269 -28.708 1 80.82 ? H12 TRS 301 A 1 
HETATM 11 H H21 TRS . . . E 3 -25.489 40.19 -25.028 1 82.85 ? H21 TRS 301 A 1 
HETATM 12 H H22 TRS . . . E 3 -25.988 38.547 -25.427 1 82.85 ? H22 TRS 301 A 1 
HETATM 13 H H31 TRS . . . E 3 -23.559 39.872 -26.352 1 75.35 ? H31 TRS 301 A 1 
HETATM 14 H H32 TRS . . . E 3 -23.949 38.35 -27.15 1 75.35 ? H32 TRS 301 A 1 
HETATM 15 H HN1 TRS . . . E 3 -26.07 38.886 -29.111 1 85.38 ? HN1 TRS 301 A 1 
HETATM 16 H HN2 TRS . . . E 3 -27.318 38.98 -28.244 1 85.38 ? HN2 TRS 301 A 1 
HETATM 17 H HN3 TRS . . . E 3 -26.306 37.869 -28.003 1 85.38 ? HN3 TRS 301 A 1 
HETATM 18 H HO1 TRS . . . E 3 -24.892 42.978 -27.32 1 78.19 ? HO1 TRS 301 A 1 
HETATM 19 H HO2 TRS . . . E 3 -27.726 39.981 -24.707 1 82.25 ? HO2 TRS 301 A 1 
HETATM 20 H HO3 TRS . . . E 3 -22.651 39.724 -28.505 1 73.67 ? HO3 TRS 301 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           20 
#