data_8EYI # _model_server_result.job_id -bsKSMRPoCquySR663cziA _model_server_result.datetime_utc '2024-11-22 20:15:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8eyi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":3001}' # _entry.id 8EYI # _exptl.entry_id 8EYI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8EYI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EYI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 235 n n PA O2A NDP sing 236 n n PA O5B NDP sing 237 n n PA O3 NDP sing 238 n n O2A HOA2 NDP sing 239 n n O5B C5B NDP sing 240 n n C5B C4B NDP sing 241 n n C5B H51A NDP sing 242 n n C5B H52A NDP sing 243 n n C4B O4B NDP sing 244 n n C4B C3B NDP sing 245 n n C4B H4B NDP sing 246 n n O4B C1B NDP sing 247 n n C3B O3B NDP sing 248 n n C3B C2B NDP sing 249 n n C3B H3B NDP sing 250 n n O3B HO3A NDP sing 251 n n C2B O2B NDP sing 252 n n C2B C1B NDP sing 253 n n C2B H2B NDP sing 254 n n O2B P2B NDP sing 255 n n C1B N9A NDP sing 256 n n C1B H1B NDP sing 257 n n N9A C8A NDP sing 258 n y N9A C4A NDP sing 259 n y C8A N7A NDP doub 260 n y C8A H8A NDP sing 261 n n N7A C5A NDP sing 262 n y C5A C6A NDP sing 263 n y C5A C4A NDP doub 264 n y C6A N6A NDP sing 265 n n C6A N1A NDP doub 266 n y N6A H61A NDP sing 267 n n N6A H62A NDP sing 268 n n N1A C2A NDP sing 269 n y C2A N3A NDP doub 270 n y C2A H2A NDP sing 271 n n N3A C4A NDP sing 272 n y O3 PN NDP sing 273 n n PN O1N NDP doub 274 n n PN O2N NDP sing 275 n n PN O5D NDP sing 276 n n O2N H21N NDP sing 277 n n O5D C5D NDP sing 278 n n C5D C4D NDP sing 279 n n C5D H51N NDP sing 280 n n C5D H52N NDP sing 281 n n C4D O4D NDP sing 282 n n C4D C3D NDP sing 283 n n C4D H4D NDP sing 284 n n O4D C1D NDP sing 285 n n C3D O3D NDP sing 286 n n C3D C2D NDP sing 287 n n C3D H3D NDP sing 288 n n O3D HO3N NDP sing 289 n n C2D O2D NDP sing 290 n n C2D C1D NDP sing 291 n n C2D H2D NDP sing 292 n n O2D HO2N NDP sing 293 n n C1D N1N NDP sing 294 n n C1D H1D NDP sing 295 n n N1N C2N NDP sing 296 n n N1N C6N NDP sing 297 n n C2N C3N NDP doub 298 n n C2N H2N NDP sing 299 n n C3N C7N NDP sing 300 n n C3N C4N NDP sing 301 n n C7N O7N NDP doub 302 n n C7N N7N NDP sing 303 n n N7N H71N NDP sing 304 n n N7N H72N NDP sing 305 n n C4N C5N NDP sing 306 n n C4N H41N NDP sing 307 n n C4N H42N NDP sing 308 n n C5N C6N NDP doub 309 n n C5N H5N NDP sing 310 n n C6N H6N NDP sing 311 n n P2B O1X NDP doub 312 n n P2B O2X NDP sing 313 n n P2B O3X NDP sing 314 n n O2X HOP2 NDP sing 315 n n O3X HOP3 NDP sing 316 n n # _atom_sites.entry_id 8EYI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP E 1 3001 3001 NDP NAP . D 2 NDP E 1 3002 3002 NDP NAP . E 2 NDP F 1 3001 3001 NDP NAP . F 2 NDP F 1 3002 3002 NDP NAP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . C 2 130.645 135.876 155.401 1 106.04 ? PA NDP 3001 E 1 HETATM 2 O O1A NDP . . . C 2 131.064 134.722 156.226 1 117.45 -1 O1A NDP 3001 E 1 HETATM 3 O O2A NDP . . . C 2 130.815 137.155 156.098 1 127.42 ? O2A NDP 3001 E 1 HETATM 4 O O5B NDP . . . C 2 129.124 135.618 155.026 1 134.47 ? O5B NDP 3001 E 1 HETATM 5 C C5B NDP . . . C 2 128.906 135.185 153.737 1 124.35 ? C5B NDP 3001 E 1 HETATM 6 C C4B NDP . . . C 2 127.604 134.381 153.798 1 140.33 ? C4B NDP 3001 E 1 HETATM 7 O O4B NDP . . . C 2 127.846 133.218 153.434 1 140.9 ? O4B NDP 3001 E 1 HETATM 8 C C3B NDP . . . C 2 127.293 134.049 155.256 1 154.57 ? C3B NDP 3001 E 1 HETATM 9 O O3B NDP . . . C 2 126.72 135.132 155.782 1 123.84 ? O3B NDP 3001 E 1 HETATM 10 C C2B NDP . . . C 2 126.235 133.026 155.06 1 179.02 ? C2B NDP 3001 E 1 HETATM 11 O O2B NDP . . . C 2 125.021 133.811 154.71 1 186.44 ? O2B NDP 3001 E 1 HETATM 12 C C1B NDP . . . C 2 126.577 132.424 153.998 1 169.86 ? C1B NDP 3001 E 1 HETATM 13 N N9A NDP . . . C 2 126.898 131.091 154.353 1 162.53 ? N9A NDP 3001 E 1 HETATM 14 C C8A NDP . . . C 2 126.168 130.032 154.073 1 132.85 ? C8A NDP 3001 E 1 HETATM 15 N N7A NDP . . . C 2 126.744 128.955 154.564 1 120.72 ? N7A NDP 3001 E 1 HETATM 16 C C5A NDP . . . C 2 127.868 129.348 155.169 1 181.91 ? C5A NDP 3001 E 1 HETATM 17 C C6A NDP . . . C 2 128.881 128.682 155.848 1 189.18 ? C6A NDP 3001 E 1 HETATM 18 N N6A NDP . . . C 2 128.805 127.25 156.001 1 134.17 ? N6A NDP 3001 E 1 HETATM 19 N N1A NDP . . . C 2 129.89 129.369 156.34 1 167.1 ? N1A NDP 3001 E 1 HETATM 20 C C2A NDP . . . C 2 129.941 130.681 156.189 1 113.31 ? C2A NDP 3001 E 1 HETATM 21 N N3A NDP . . . C 2 129 131.335 155.549 1 107.37 ? N3A NDP 3001 E 1 HETATM 22 C C4A NDP . . . C 2 127.959 130.707 155.031 1 163.26 ? C4A NDP 3001 E 1 HETATM 23 O O3 NDP . . . C 2 131.368 136.028 153.995 1 122.02 ? O3 NDP 3001 E 1 HETATM 24 P PN NDP . . . C 2 131.505 137.532 153.489 1 116.35 ? PN NDP 3001 E 1 HETATM 25 O O1N NDP . . . C 2 130.245 138.184 153.786 1 139.56 -1 O1N NDP 3001 E 1 HETATM 26 O O2N NDP . . . C 2 132.609 138.206 154.189 1 100.8 ? O2N NDP 3001 E 1 HETATM 27 O O5D NDP . . . C 2 131.723 137.642 151.911 1 103.03 ? O5D NDP 3001 E 1 HETATM 28 C C5D NDP . . . C 2 130.782 137.013 151.118 1 129.23 ? C5D NDP 3001 E 1 HETATM 29 C C4D NDP . . . C 2 131.453 136.432 150.089 1 100.8 ? C4D NDP 3001 E 1 HETATM 30 O O4D NDP . . . C 2 132.28 137.461 149.335 1 102.14 ? O4D NDP 3001 E 1 HETATM 31 C C3D NDP . . . C 2 132.498 135.456 150.697 1 100.8 ? C3D NDP 3001 E 1 HETATM 32 O O3D NDP . . . C 2 132.231 134.121 150.123 1 124.72 ? O3D NDP 3001 E 1 HETATM 33 C C2D NDP . . . C 2 133.613 135.934 150.409 1 101.21 ? C2D NDP 3001 E 1 HETATM 34 O O2D NDP . . . C 2 134.523 134.889 150.057 1 110.93 ? O2D NDP 3001 E 1 HETATM 35 C C1D NDP . . . C 2 133.387 136.917 149.109 1 100.8 ? C1D NDP 3001 E 1 HETATM 36 N N1N NDP . . . C 2 134.279 137.988 149.087 1 122.28 ? N1N NDP 3001 E 1 HETATM 37 C C2N NDP . . . C 2 134.731 138.354 147.93 1 142.21 ? C2N NDP 3001 E 1 HETATM 38 C C3N NDP . . . C 2 135.595 139.395 147.768 1 100.8 ? C3N NDP 3001 E 1 HETATM 39 C C7N NDP . . . C 2 136.08 139.74 146.385 1 100.8 ? C7N NDP 3001 E 1 HETATM 40 O O7N NDP . . . C 2 137.03 140.388 146.226 1 113.31 ? O7N NDP 3001 E 1 HETATM 41 N N7N NDP . . . C 2 135.375 139.225 145.252 1 100.8 ? N7N NDP 3001 E 1 HETATM 42 C C4N NDP . . . C 2 135.983 140.078 148.887 1 100.8 ? C4N NDP 3001 E 1 HETATM 43 C C5N NDP . . . C 2 135.472 139.678 150.101 1 100.8 ? C5N NDP 3001 E 1 HETATM 44 C C6N NDP . . . C 2 134.609 138.619 150.165 1 100.8 ? C6N NDP 3001 E 1 HETATM 45 P P2B NDP . . . C 2 123.596 133.056 154.614 1 138.25 ? P2B NDP 3001 E 1 HETATM 46 O O1X NDP . . . C 2 122.557 134.023 155.055 1 100.8 ? O1X NDP 3001 E 1 HETATM 47 O O2X NDP . . . C 2 123.419 132.748 153.173 1 100.8 -1 O2X NDP 3001 E 1 HETATM 48 O O3X NDP . . . C 2 123.565 131.84 155.476 1 136.64 ? O3X NDP 3001 E 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #