data_8EYM
#
_model_server_result.job_id            gxU1EVXIVnSFTnA2k_maHw 
_model_server_result.datetime_utc      '2024-11-25 00:22:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8eym 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    8EYM 
#
_exptl.entry_id    8EYM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              261.167 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-DEOXY-2-AMINO GLUCITOL-6-PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8EYM 
_cell.length_a            73.181 
_cell.length_b            80.237 
_cell.length_c            91.508 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8EYM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'C6 H16 N O8 P' 
_chem_comp.formula_weight    261.167 
_chem_comp.id                AGP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-DEOXY-2-AMINO GLUCITOL-6-PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 AGP sing 36 n n 
C1 C2 AGP sing 37 n n 
C1 H11 AGP sing 38 n n 
C1 H12 AGP sing 39 n n 
O1 HO1 AGP sing 40 n n 
C2 N2 AGP sing 41 n n 
C2 C3 AGP sing 42 n n 
C2 H2 AGP sing 43 n n 
N2 HN21 AGP sing 44 n n 
N2 HN22 AGP sing 45 n n 
C3 O3 AGP sing 46 n n 
C3 C4 AGP sing 47 n n 
C3 H3 AGP sing 48 n n 
O3 HO3 AGP sing 49 n n 
C4 O4 AGP sing 50 n n 
C4 C5 AGP sing 51 n n 
C4 H4 AGP sing 52 n n 
O4 HO4 AGP sing 53 n n 
C5 O5 AGP sing 54 n n 
C5 C6 AGP sing 55 n n 
C5 H5 AGP sing 56 n n 
O5 HO5 AGP sing 57 n n 
C6 O6 AGP sing 58 n n 
C6 H61 AGP sing 59 n n 
C6 H62 AGP sing 60 n n 
O6 P AGP sing 61 n n 
P O1P AGP doub 62 n n 
P O2P AGP sing 63 n n 
P O3P AGP sing 64 n n 
O2P HOP2 AGP sing 65 n n 
O3P HOP3 AGP sing 66 n n 
#
_atom_sites.entry_id                     8EYM 
_atom_sites.fract_transf_matrix[1][1]    0.013665 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012463 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010928 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 16G A 1 401 401 16G 16G . 
D 3 AGP A 1 402 501 AGP AGP . 
E 2 16G B 1 401 401 16G 16G . 
F 3 AGP B 1 402 501 AGP AGP . 
G 4 HOH A 1 501 91 HOH HOH . 
G 4 HOH A 2 502 5 HOH HOH . 
G 4 HOH A 3 503 9 HOH HOH . 
G 4 HOH A 4 504 44 HOH HOH . 
G 4 HOH A 5 505 123 HOH HOH . 
G 4 HOH A 6 506 43 HOH HOH . 
G 4 HOH A 7 507 39 HOH HOH . 
G 4 HOH A 8 508 101 HOH HOH . 
G 4 HOH A 9 509 10 HOH HOH . 
G 4 HOH A 10 510 112 HOH HOH . 
G 4 HOH A 11 511 23 HOH HOH . 
G 4 HOH A 12 512 79 HOH HOH . 
G 4 HOH A 13 513 26 HOH HOH . 
G 4 HOH A 14 514 17 HOH HOH . 
G 4 HOH A 15 515 25 HOH HOH . 
G 4 HOH A 16 516 2 HOH HOH . 
G 4 HOH A 17 517 42 HOH HOH . 
G 4 HOH A 18 518 110 HOH HOH . 
G 4 HOH A 19 519 64 HOH HOH . 
G 4 HOH A 20 520 24 HOH HOH . 
G 4 HOH A 21 521 55 HOH HOH . 
G 4 HOH A 22 522 93 HOH HOH . 
G 4 HOH A 23 523 28 HOH HOH . 
G 4 HOH A 24 524 89 HOH HOH . 
G 4 HOH A 25 525 77 HOH HOH . 
G 4 HOH A 26 526 33 HOH HOH . 
G 4 HOH A 27 527 53 HOH HOH . 
G 4 HOH A 28 528 159 HOH HOH . 
G 4 HOH A 29 529 59 HOH HOH . 
G 4 HOH A 30 530 16 HOH HOH . 
G 4 HOH A 31 531 97 HOH HOH . 
G 4 HOH A 32 532 80 HOH HOH . 
G 4 HOH A 33 533 113 HOH HOH . 
G 4 HOH A 34 534 37 HOH HOH . 
G 4 HOH A 35 535 63 HOH HOH . 
G 4 HOH A 36 536 31 HOH HOH . 
G 4 HOH A 37 537 48 HOH HOH . 
G 4 HOH A 38 538 153 HOH HOH . 
G 4 HOH A 39 539 165 HOH HOH . 
G 4 HOH A 40 540 125 HOH HOH . 
G 4 HOH A 41 541 178 HOH HOH . 
G 4 HOH A 42 542 122 HOH HOH . 
G 4 HOH A 43 543 74 HOH HOH . 
G 4 HOH A 44 544 108 HOH HOH . 
G 4 HOH A 45 545 46 HOH HOH . 
G 4 HOH A 46 546 6 HOH HOH . 
G 4 HOH A 47 547 177 HOH HOH . 
G 4 HOH A 48 548 154 HOH HOH . 
G 4 HOH A 49 549 103 HOH HOH . 
G 4 HOH A 50 550 162 HOH HOH . 
G 4 HOH A 51 551 111 HOH HOH . 
G 4 HOH A 52 552 88 HOH HOH . 
G 4 HOH A 53 553 147 HOH HOH . 
G 4 HOH A 54 554 137 HOH HOH . 
G 4 HOH A 55 555 132 HOH HOH . 
G 4 HOH A 56 556 167 HOH HOH . 
G 4 HOH A 57 557 163 HOH HOH . 
G 4 HOH A 58 558 158 HOH HOH . 
G 4 HOH A 59 559 152 HOH HOH . 
G 4 HOH A 60 560 176 HOH HOH . 
G 4 HOH A 61 561 140 HOH HOH . 
G 4 HOH A 62 562 133 HOH HOH . 
G 4 HOH A 63 563 156 HOH HOH . 
G 4 HOH A 64 564 173 HOH HOH . 
G 4 HOH A 65 565 155 HOH HOH . 
G 4 HOH A 66 566 157 HOH HOH . 
G 4 HOH A 67 567 143 HOH HOH . 
G 4 HOH A 68 568 151 HOH HOH . 
G 4 HOH A 69 569 184 HOH HOH . 
G 4 HOH A 70 570 168 HOH HOH . 
G 4 HOH A 71 571 183 HOH HOH . 
G 4 HOH A 72 572 118 HOH HOH . 
G 4 HOH A 73 573 150 HOH HOH . 
G 4 HOH A 74 574 164 HOH HOH . 
H 4 HOH B 1 501 65 HOH HOH . 
H 4 HOH B 2 502 72 HOH HOH . 
H 4 HOH B 3 503 114 HOH HOH . 
H 4 HOH B 4 504 51 HOH HOH . 
H 4 HOH B 5 505 22 HOH HOH . 
H 4 HOH B 6 506 126 HOH HOH . 
H 4 HOH B 7 507 1 HOH HOH . 
H 4 HOH B 8 508 56 HOH HOH . 
H 4 HOH B 9 509 78 HOH HOH . 
H 4 HOH B 10 510 8 HOH HOH . 
H 4 HOH B 11 511 32 HOH HOH . 
H 4 HOH B 12 512 61 HOH HOH . 
H 4 HOH B 13 513 12 HOH HOH . 
H 4 HOH B 14 514 169 HOH HOH . 
H 4 HOH B 15 515 68 HOH HOH . 
H 4 HOH B 16 516 130 HOH HOH . 
H 4 HOH B 17 517 13 HOH HOH . 
H 4 HOH B 18 518 40 HOH HOH . 
H 4 HOH B 19 519 3 HOH HOH . 
H 4 HOH B 20 520 76 HOH HOH . 
H 4 HOH B 21 521 19 HOH HOH . 
H 4 HOH B 22 522 4 HOH HOH . 
H 4 HOH B 23 523 35 HOH HOH . 
H 4 HOH B 24 524 67 HOH HOH . 
H 4 HOH B 25 525 11 HOH HOH . 
H 4 HOH B 26 526 21 HOH HOH . 
H 4 HOH B 27 527 36 HOH HOH . 
H 4 HOH B 28 528 20 HOH HOH . 
H 4 HOH B 29 529 121 HOH HOH . 
H 4 HOH B 30 530 57 HOH HOH . 
H 4 HOH B 31 531 82 HOH HOH . 
H 4 HOH B 32 532 139 HOH HOH . 
H 4 HOH B 33 533 73 HOH HOH . 
H 4 HOH B 34 534 102 HOH HOH . 
H 4 HOH B 35 535 50 HOH HOH . 
H 4 HOH B 36 536 27 HOH HOH . 
H 4 HOH B 37 537 30 HOH HOH . 
H 4 HOH B 38 538 120 HOH HOH . 
H 4 HOH B 39 539 34 HOH HOH . 
H 4 HOH B 40 540 7 HOH HOH . 
H 4 HOH B 41 541 47 HOH HOH . 
H 4 HOH B 42 542 94 HOH HOH . 
H 4 HOH B 43 543 83 HOH HOH . 
H 4 HOH B 44 544 75 HOH HOH . 
H 4 HOH B 45 545 95 HOH HOH . 
H 4 HOH B 46 546 131 HOH HOH . 
H 4 HOH B 47 547 38 HOH HOH . 
H 4 HOH B 48 548 18 HOH HOH . 
H 4 HOH B 49 549 29 HOH HOH . 
H 4 HOH B 50 550 60 HOH HOH . 
H 4 HOH B 51 551 69 HOH HOH . 
H 4 HOH B 52 552 81 HOH HOH . 
H 4 HOH B 53 553 41 HOH HOH . 
H 4 HOH B 54 554 52 HOH HOH . 
H 4 HOH B 55 555 86 HOH HOH . 
H 4 HOH B 56 556 161 HOH HOH . 
H 4 HOH B 57 557 45 HOH HOH . 
H 4 HOH B 58 558 15 HOH HOH . 
H 4 HOH B 59 559 124 HOH HOH . 
H 4 HOH B 60 560 85 HOH HOH . 
H 4 HOH B 61 561 66 HOH HOH . 
H 4 HOH B 62 562 54 HOH HOH . 
H 4 HOH B 63 563 96 HOH HOH . 
H 4 HOH B 64 564 14 HOH HOH . 
H 4 HOH B 65 565 182 HOH HOH . 
H 4 HOH B 66 566 174 HOH HOH . 
H 4 HOH B 67 567 90 HOH HOH . 
H 4 HOH B 68 568 70 HOH HOH . 
H 4 HOH B 69 569 49 HOH HOH . 
H 4 HOH B 70 570 166 HOH HOH . 
H 4 HOH B 71 571 109 HOH HOH . 
H 4 HOH B 72 572 128 HOH HOH . 
H 4 HOH B 73 573 106 HOH HOH . 
H 4 HOH B 74 574 104 HOH HOH . 
H 4 HOH B 75 575 146 HOH HOH . 
H 4 HOH B 76 576 98 HOH HOH . 
H 4 HOH B 77 577 142 HOH HOH . 
H 4 HOH B 78 578 141 HOH HOH . 
H 4 HOH B 79 579 145 HOH HOH . 
H 4 HOH B 80 580 171 HOH HOH . 
H 4 HOH B 81 581 71 HOH HOH . 
H 4 HOH B 82 582 92 HOH HOH . 
H 4 HOH B 83 583 107 HOH HOH . 
H 4 HOH B 84 584 100 HOH HOH . 
H 4 HOH B 85 585 144 HOH HOH . 
H 4 HOH B 86 586 181 HOH HOH . 
H 4 HOH B 87 587 84 HOH HOH . 
H 4 HOH B 88 588 180 HOH HOH . 
H 4 HOH B 89 589 135 HOH HOH . 
H 4 HOH B 90 590 148 HOH HOH . 
H 4 HOH B 91 591 179 HOH HOH . 
H 4 HOH B 92 592 99 HOH HOH . 
H 4 HOH B 93 593 105 HOH HOH . 
H 4 HOH B 94 594 170 HOH HOH . 
H 4 HOH B 95 595 136 HOH HOH . 
H 4 HOH B 96 596 172 HOH HOH . 
H 4 HOH B 97 597 119 HOH HOH . 
H 4 HOH B 98 598 138 HOH HOH . 
H 4 HOH B 99 599 58 HOH HOH . 
H 4 HOH B 100 600 62 HOH HOH . 
H 4 HOH B 101 601 175 HOH HOH . 
H 4 HOH B 102 602 115 HOH HOH . 
H 4 HOH B 103 603 87 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 AGP . . . D 3 -9.912 -9.24 8.073 1 40.37 ? C1 AGP 402 A 1 
HETATM 2 O O1 AGP . . . D 3 -10.281 -9.018 9.436 1 38.6 ? O1 AGP 402 A 1 
HETATM 3 C C2 AGP . . . D 3 -11.142 -9.209 7.157 1 45.16 ? C2 AGP 402 A 1 
HETATM 4 N N2 AGP . . . D 3 -12.175 -10.136 7.597 1 44.57 ? N2 AGP 402 A 1 
HETATM 5 C C3 AGP . . . D 3 -10.799 -9.516 5.7 1 41.41 ? C3 AGP 402 A 1 
HETATM 6 O O3 AGP . . . D 3 -9.995 -8.455 5.188 1 39.83 ? O3 AGP 402 A 1 
HETATM 7 C C4 AGP . . . D 3 -10.111 -10.87 5.465 1 39.63 ? C4 AGP 402 A 1 
HETATM 8 O O4 AGP . . . D 3 -8.725 -10.835 5.825 1 39.29 ? O4 AGP 402 A 1 
HETATM 9 C C5 AGP . . . D 3 -10.199 -11.27 3.995 1 38.84 ? C5 AGP 402 A 1 
HETATM 10 O O5 AGP . . . D 3 -11.321 -10.676 3.353 1 41.29 ? O5 AGP 402 A 1 
HETATM 11 C C6 AGP . . . D 3 -10.423 -12.753 3.886 1 42.97 ? C6 AGP 402 A 1 
HETATM 12 O O6 AGP . . . D 3 -9.16 -13.318 3.623 1 43.72 ? O6 AGP 402 A 1 
HETATM 13 P P AGP . . . D 3 -8.992 -14.9 3.798 1 42.48 ? P AGP 402 A 1 
HETATM 14 O O1P AGP . . . D 3 -8.917 -15.427 2.383 1 44.21 ? O1P AGP 402 A 1 
HETATM 15 O O2P AGP . . . D 3 -10.231 -15.309 4.563 1 45.56 ? O2P AGP 402 A 1 
HETATM 16 O O3P AGP . . . D 3 -7.692 -14.963 4.567 1 40.83 ? O3P AGP 402 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           16 
#