data_8EYO # _model_server_result.job_id y8m9hiU4hGS341VPTQIuEg _model_server_result.datetime_utc '2024-10-19 16:45:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8eyo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 8EYO # _exptl.entry_id 8EYO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8EYO _cell.length_a 152.16 _cell.length_b 75.67 _cell.length_c 118.63 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EYO _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 152.16 75.67 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 8EYO _atom_sites.fract_transf_matrix[1][1] 0.006572 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013215 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00843 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 701 701 NAP NAP . D 3 CIT A 1 702 2 CIT CIT . E 2 NAP B 1 701 701 NAP NAP . F 3 CIT B 1 702 1 CIT CIT . G 4 HOH A 1 801 111 HOH HOH . G 4 HOH A 2 802 159 HOH HOH . G 4 HOH A 3 803 213 HOH HOH . G 4 HOH A 4 804 36 HOH HOH . G 4 HOH A 5 805 158 HOH HOH . G 4 HOH A 6 806 179 HOH HOH . G 4 HOH A 7 807 177 HOH HOH . G 4 HOH A 8 808 97 HOH HOH . G 4 HOH A 9 809 112 HOH HOH . G 4 HOH A 10 810 46 HOH HOH . G 4 HOH A 11 811 110 HOH HOH . G 4 HOH A 12 812 76 HOH HOH . G 4 HOH A 13 813 200 HOH HOH . G 4 HOH A 14 814 98 HOH HOH . G 4 HOH A 15 815 13 HOH HOH . G 4 HOH A 16 816 124 HOH HOH . G 4 HOH A 17 817 44 HOH HOH . G 4 HOH A 18 818 23 HOH HOH . G 4 HOH A 19 819 77 HOH HOH . G 4 HOH A 20 820 8 HOH HOH . G 4 HOH A 21 821 68 HOH HOH . G 4 HOH A 22 822 5 HOH HOH . G 4 HOH A 23 823 73 HOH HOH . G 4 HOH A 24 824 137 HOH HOH . G 4 HOH A 25 825 118 HOH HOH . G 4 HOH A 26 826 61 HOH HOH . G 4 HOH A 27 827 133 HOH HOH . G 4 HOH A 28 828 3 HOH HOH . G 4 HOH A 29 829 57 HOH HOH . G 4 HOH A 30 830 107 HOH HOH . G 4 HOH A 31 831 89 HOH HOH . G 4 HOH A 32 832 39 HOH HOH . G 4 HOH A 33 833 184 HOH HOH . G 4 HOH A 34 834 37 HOH HOH . G 4 HOH A 35 835 48 HOH HOH . G 4 HOH A 36 836 65 HOH HOH . G 4 HOH A 37 837 198 HOH HOH . G 4 HOH A 38 838 14 HOH HOH . G 4 HOH A 39 839 41 HOH HOH . G 4 HOH A 40 840 19 HOH HOH . G 4 HOH A 41 841 121 HOH HOH . G 4 HOH A 42 842 17 HOH HOH . G 4 HOH A 43 843 7 HOH HOH . G 4 HOH A 44 844 180 HOH HOH . G 4 HOH A 45 845 102 HOH HOH . G 4 HOH A 46 846 206 HOH HOH . G 4 HOH A 47 847 116 HOH HOH . G 4 HOH A 48 848 79 HOH HOH . G 4 HOH A 49 849 123 HOH HOH . G 4 HOH A 50 850 1 HOH HOH . G 4 HOH A 51 851 134 HOH HOH . G 4 HOH A 52 852 130 HOH HOH . G 4 HOH A 53 853 12 HOH HOH . G 4 HOH A 54 854 153 HOH HOH . G 4 HOH A 55 855 139 HOH HOH . G 4 HOH A 56 856 55 HOH HOH . G 4 HOH A 57 857 173 HOH HOH . G 4 HOH A 58 858 47 HOH HOH . G 4 HOH A 59 859 93 HOH HOH . G 4 HOH A 60 860 149 HOH HOH . G 4 HOH A 61 861 163 HOH HOH . G 4 HOH A 62 862 136 HOH HOH . G 4 HOH A 63 863 154 HOH HOH . G 4 HOH A 64 864 24 HOH HOH . G 4 HOH A 65 865 174 HOH HOH . G 4 HOH A 66 866 172 HOH HOH . G 4 HOH A 67 867 152 HOH HOH . G 4 HOH A 68 868 129 HOH HOH . G 4 HOH A 69 869 117 HOH HOH . G 4 HOH A 70 870 95 HOH HOH . G 4 HOH A 71 871 63 HOH HOH . G 4 HOH A 72 872 81 HOH HOH . G 4 HOH A 73 873 66 HOH HOH . G 4 HOH A 74 874 49 HOH HOH . G 4 HOH A 75 875 122 HOH HOH . G 4 HOH A 76 876 106 HOH HOH . G 4 HOH A 77 877 59 HOH HOH . G 4 HOH A 78 878 189 HOH HOH . G 4 HOH A 79 879 91 HOH HOH . G 4 HOH A 80 880 34 HOH HOH . G 4 HOH A 81 881 69 HOH HOH . G 4 HOH A 82 882 94 HOH HOH . G 4 HOH A 83 883 100 HOH HOH . G 4 HOH A 84 884 38 HOH HOH . G 4 HOH A 85 885 157 HOH HOH . G 4 HOH A 86 886 131 HOH HOH . G 4 HOH A 87 887 62 HOH HOH . G 4 HOH A 88 888 43 HOH HOH . G 4 HOH A 89 889 176 HOH HOH . G 4 HOH A 90 890 70 HOH HOH . G 4 HOH A 91 891 87 HOH HOH . G 4 HOH A 92 892 78 HOH HOH . G 4 HOH A 93 893 114 HOH HOH . G 4 HOH A 94 894 165 HOH HOH . G 4 HOH A 95 895 204 HOH HOH . G 4 HOH A 96 896 108 HOH HOH . G 4 HOH A 97 897 155 HOH HOH . G 4 HOH A 98 898 150 HOH HOH . G 4 HOH A 99 899 197 HOH HOH . G 4 HOH A 100 900 53 HOH HOH . G 4 HOH A 101 901 85 HOH HOH . G 4 HOH A 102 902 147 HOH HOH . G 4 HOH A 103 903 22 HOH HOH . G 4 HOH A 104 904 140 HOH HOH . G 4 HOH A 105 905 220 HOH HOH . G 4 HOH A 106 906 92 HOH HOH . G 4 HOH A 107 907 214 HOH HOH . G 4 HOH A 108 908 83 HOH HOH . G 4 HOH A 109 909 208 HOH HOH . G 4 HOH A 110 910 128 HOH HOH . G 4 HOH A 111 911 135 HOH HOH . G 4 HOH A 112 912 218 HOH HOH . G 4 HOH A 113 913 138 HOH HOH . G 4 HOH A 114 914 56 HOH HOH . G 4 HOH A 115 915 193 HOH HOH . G 4 HOH A 116 916 142 HOH HOH . G 4 HOH A 117 917 60 HOH HOH . G 4 HOH A 118 918 217 HOH HOH . G 4 HOH A 119 919 160 HOH HOH . H 4 HOH B 1 801 168 HOH HOH . H 4 HOH B 2 802 212 HOH HOH . H 4 HOH B 3 803 167 HOH HOH . H 4 HOH B 4 804 101 HOH HOH . H 4 HOH B 5 805 175 HOH HOH . H 4 HOH B 6 806 119 HOH HOH . H 4 HOH B 7 807 148 HOH HOH . H 4 HOH B 8 808 201 HOH HOH . H 4 HOH B 9 809 203 HOH HOH . H 4 HOH B 10 810 32 HOH HOH . H 4 HOH B 11 811 215 HOH HOH . H 4 HOH B 12 812 20 HOH HOH . H 4 HOH B 13 813 45 HOH HOH . H 4 HOH B 14 814 35 HOH HOH . H 4 HOH B 15 815 26 HOH HOH . H 4 HOH B 16 816 80 HOH HOH . H 4 HOH B 17 817 28 HOH HOH . H 4 HOH B 18 818 4 HOH HOH . H 4 HOH B 19 819 125 HOH HOH . H 4 HOH B 20 820 29 HOH HOH . H 4 HOH B 21 821 185 HOH HOH . H 4 HOH B 22 822 181 HOH HOH . H 4 HOH B 23 823 120 HOH HOH . H 4 HOH B 24 824 171 HOH HOH . H 4 HOH B 25 825 143 HOH HOH . H 4 HOH B 26 826 202 HOH HOH . H 4 HOH B 27 827 207 HOH HOH . H 4 HOH B 28 828 84 HOH HOH . H 4 HOH B 29 829 30 HOH HOH . H 4 HOH B 30 830 2 HOH HOH . H 4 HOH B 31 831 6 HOH HOH . H 4 HOH B 32 832 33 HOH HOH . H 4 HOH B 33 833 42 HOH HOH . H 4 HOH B 34 834 27 HOH HOH . H 4 HOH B 35 835 18 HOH HOH . H 4 HOH B 36 836 15 HOH HOH . H 4 HOH B 37 837 21 HOH HOH . H 4 HOH B 38 838 192 HOH HOH . H 4 HOH B 39 839 75 HOH HOH . H 4 HOH B 40 840 50 HOH HOH . H 4 HOH B 41 841 51 HOH HOH . H 4 HOH B 42 842 132 HOH HOH . H 4 HOH B 43 843 82 HOH HOH . H 4 HOH B 44 844 88 HOH HOH . H 4 HOH B 45 845 109 HOH HOH . H 4 HOH B 46 846 90 HOH HOH . H 4 HOH B 47 847 58 HOH HOH . H 4 HOH B 48 848 219 HOH HOH . H 4 HOH B 49 849 126 HOH HOH . H 4 HOH B 50 850 64 HOH HOH . H 4 HOH B 51 851 11 HOH HOH . H 4 HOH B 52 852 52 HOH HOH . H 4 HOH B 53 853 144 HOH HOH . H 4 HOH B 54 854 105 HOH HOH . H 4 HOH B 55 855 113 HOH HOH . H 4 HOH B 56 856 71 HOH HOH . H 4 HOH B 57 857 190 HOH HOH . H 4 HOH B 58 858 182 HOH HOH . H 4 HOH B 59 859 145 HOH HOH . H 4 HOH B 60 860 16 HOH HOH . H 4 HOH B 61 861 74 HOH HOH . H 4 HOH B 62 862 9 HOH HOH . H 4 HOH B 63 863 195 HOH HOH . H 4 HOH B 64 864 209 HOH HOH . H 4 HOH B 65 865 96 HOH HOH . H 4 HOH B 66 866 72 HOH HOH . H 4 HOH B 67 867 164 HOH HOH . H 4 HOH B 68 868 103 HOH HOH . H 4 HOH B 69 869 104 HOH HOH . H 4 HOH B 70 870 10 HOH HOH . H 4 HOH B 71 871 161 HOH HOH . H 4 HOH B 72 872 40 HOH HOH . H 4 HOH B 73 873 221 HOH HOH . H 4 HOH B 74 874 67 HOH HOH . H 4 HOH B 75 875 169 HOH HOH . H 4 HOH B 76 876 141 HOH HOH . H 4 HOH B 77 877 187 HOH HOH . H 4 HOH B 78 878 199 HOH HOH . H 4 HOH B 79 879 99 HOH HOH . H 4 HOH B 80 880 86 HOH HOH . H 4 HOH B 81 881 170 HOH HOH . H 4 HOH B 82 882 196 HOH HOH . H 4 HOH B 83 883 31 HOH HOH . H 4 HOH B 84 884 188 HOH HOH . H 4 HOH B 85 885 162 HOH HOH . H 4 HOH B 86 886 194 HOH HOH . H 4 HOH B 87 887 216 HOH HOH . H 4 HOH B 88 888 151 HOH HOH . H 4 HOH B 89 889 191 HOH HOH . H 4 HOH B 90 890 146 HOH HOH . H 4 HOH B 91 891 127 HOH HOH . H 4 HOH B 92 892 156 HOH HOH . H 4 HOH B 93 893 211 HOH HOH . H 4 HOH B 94 894 54 HOH HOH . H 4 HOH B 95 895 25 HOH HOH . H 4 HOH B 96 896 166 HOH HOH . H 4 HOH B 97 897 222 HOH HOH . H 4 HOH B 98 898 178 HOH HOH . H 4 HOH B 99 899 183 HOH HOH . H 4 HOH B 100 900 186 HOH HOH . H 4 HOH B 101 901 115 HOH HOH . H 4 HOH B 102 902 210 HOH HOH . H 4 HOH B 103 903 205 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . D 3 67.524 30.786 37.669 1 92.28 ? C1 CIT 702 A 1 HETATM 2 O O1 CIT . . . D 3 67.791 31.277 36.55 1 91.32 ? O1 CIT 702 A 1 HETATM 3 O O2 CIT . . . D 3 67.932 31.367 38.698 1 92.61 ? O2 CIT 702 A 1 HETATM 4 C C2 CIT . . . D 3 66.716 29.515 37.782 1 92.68 ? C2 CIT 702 A 1 HETATM 5 C C3 CIT . . . D 3 67.645 28.309 37.906 1 91.67 ? C3 CIT 702 A 1 HETATM 6 O O7 CIT . . . D 3 66.84 27.102 37.941 1 94.47 ? O7 CIT 702 A 1 HETATM 7 C C4 CIT . . . D 3 68.641 28.216 36.754 1 79.58 ? C4 CIT 702 A 1 HETATM 8 C C5 CIT . . . D 3 67.973 27.703 35.499 1 67.82 ? C5 CIT 702 A 1 HETATM 9 O O3 CIT . . . D 3 68.612 27.66 34.426 1 64.79 ? O3 CIT 702 A 1 HETATM 10 O O4 CIT . . . D 3 66.784 27.316 35.509 1 62.33 ? O4 CIT 702 A 1 HETATM 11 C C6 CIT . . . D 3 68.422 28.412 39.209 1 97.64 ? C6 CIT 702 A 1 HETATM 12 O O5 CIT . . . D 3 69.643 28.683 39.187 1 99.26 ? O5 CIT 702 A 1 HETATM 13 O O6 CIT . . . D 3 67.852 28.242 40.31 1 99.39 ? O6 CIT 702 A 1 # _model_server_stats.io_time_ms 157 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #