data_8EZG
#
_model_server_result.job_id            6GBFl_vl5nynANNSLRuYRg 
_model_server_result.datetime_utc      '2024-11-25 15:59:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ezg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":201}' 
#
_entry.id    8EZG 
#
_exptl.entry_id    8EZG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8EZG 
_cell.length_a            156.477 
_cell.length_b            156.477 
_cell.length_c            64.624 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8EZG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        181 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 17 A SER 17 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? 
metalc ? metalc2 C O1B GDP . A GDP 201 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? 
metalc ? metalc3 D MG MG . A MG 202 1_555 F O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? 
metalc ? metalc4 D MG MG . A MG 202 1_555 F O HOH . A HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc5 D MG MG . A MG 202 1_555 F O HOH . A HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
metalc ? metalc6 D MG MG . A MG 202 1_555 F O HOH . A HOH 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc7 B OG SER 20 B SER 21 1_555 E NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? 
metalc ? metalc8 B O TRP 21 B TRP 22 1_555 E NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? 
metalc ? metalc9 B O SER 54 B SER 55 1_555 E NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? 
metalc ? metalc10 B OG SER 54 B SER 55 1_555 E NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? 
metalc ? metalc11 E NA NA . B NA 201 1_555 G O HOH . B HOH 320 12_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? 
metalc ? metalc12 E NA NA . B NA 201 1_555 G O HOH . B HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? 
metalc ? metalc13 E NA NA . B NA 201 1_555 G O HOH . B HOH 324 12_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8EZG 
_atom_sites.fract_transf_matrix[1][1]    0.006391 
_atom_sites.fract_transf_matrix[1][2]    0.00369 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007379 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015474 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GDP A 1 201 201 GDP GDP . 
D 4 MG A 1 202 202 MG MG . 
E 5 NA B 1 201 201 NA NA . 
F 6 HOH A 1 301 50 HOH HOH . 
F 6 HOH A 2 302 102 HOH HOH . 
F 6 HOH A 3 303 96 HOH HOH . 
F 6 HOH A 4 304 31 HOH HOH . 
F 6 HOH A 5 305 108 HOH HOH . 
F 6 HOH A 6 306 85 HOH HOH . 
F 6 HOH A 7 307 22 HOH HOH . 
F 6 HOH A 8 308 87 HOH HOH . 
F 6 HOH A 9 309 104 HOH HOH . 
F 6 HOH A 10 310 36 HOH HOH . 
F 6 HOH A 11 311 75 HOH HOH . 
F 6 HOH A 12 312 116 HOH HOH . 
F 6 HOH A 13 313 28 HOH HOH . 
F 6 HOH A 14 314 109 HOH HOH . 
F 6 HOH A 15 315 103 HOH HOH . 
F 6 HOH A 16 316 79 HOH HOH . 
F 6 HOH A 17 317 27 HOH HOH . 
F 6 HOH A 18 318 35 HOH HOH . 
F 6 HOH A 19 319 95 HOH HOH . 
F 6 HOH A 20 320 7 HOH HOH . 
F 6 HOH A 21 321 60 HOH HOH . 
F 6 HOH A 22 322 56 HOH HOH . 
F 6 HOH A 23 323 91 HOH HOH . 
F 6 HOH A 24 324 23 HOH HOH . 
F 6 HOH A 25 325 119 HOH HOH . 
F 6 HOH A 26 326 6 HOH HOH . 
F 6 HOH A 27 327 11 HOH HOH . 
F 6 HOH A 28 328 67 HOH HOH . 
F 6 HOH A 29 329 58 HOH HOH . 
F 6 HOH A 30 330 121 HOH HOH . 
F 6 HOH A 31 331 54 HOH HOH . 
F 6 HOH A 32 332 43 HOH HOH . 
F 6 HOH A 33 333 124 HOH HOH . 
F 6 HOH A 34 334 10 HOH HOH . 
F 6 HOH A 35 335 97 HOH HOH . 
F 6 HOH A 36 336 57 HOH HOH . 
F 6 HOH A 37 337 78 HOH HOH . 
F 6 HOH A 38 338 118 HOH HOH . 
F 6 HOH A 39 339 107 HOH HOH . 
F 6 HOH A 40 340 61 HOH HOH . 
F 6 HOH A 41 341 80 HOH HOH . 
F 6 HOH A 42 342 64 HOH HOH . 
F 6 HOH A 43 343 30 HOH HOH . 
F 6 HOH A 44 344 24 HOH HOH . 
F 6 HOH A 45 345 71 HOH HOH . 
F 6 HOH A 46 346 63 HOH HOH . 
F 6 HOH A 47 347 65 HOH HOH . 
F 6 HOH A 48 348 105 HOH HOH . 
F 6 HOH A 49 349 48 HOH HOH . 
F 6 HOH A 50 350 47 HOH HOH . 
F 6 HOH A 51 351 117 HOH HOH . 
F 6 HOH A 52 352 120 HOH HOH . 
F 6 HOH A 53 353 94 HOH HOH . 
F 6 HOH A 54 354 100 HOH HOH . 
F 6 HOH A 55 355 106 HOH HOH . 
F 6 HOH A 56 356 33 HOH HOH . 
F 6 HOH A 57 357 39 HOH HOH . 
F 6 HOH A 58 358 125 HOH HOH . 
F 6 HOH A 59 359 101 HOH HOH . 
F 6 HOH A 60 360 98 HOH HOH . 
F 6 HOH A 61 361 88 HOH HOH . 
F 6 HOH A 62 362 110 HOH HOH . 
F 6 HOH A 63 363 122 HOH HOH . 
G 6 HOH B 1 301 1 HOH HOH . 
G 6 HOH B 2 302 19 HOH HOH . 
G 6 HOH B 3 303 86 HOH HOH . 
G 6 HOH B 4 304 73 HOH HOH . 
G 6 HOH B 5 305 76 HOH HOH . 
G 6 HOH B 6 306 13 HOH HOH . 
G 6 HOH B 7 307 53 HOH HOH . 
G 6 HOH B 8 308 112 HOH HOH . 
G 6 HOH B 9 309 55 HOH HOH . 
G 6 HOH B 10 310 68 HOH HOH . 
G 6 HOH B 11 311 21 HOH HOH . 
G 6 HOH B 12 312 16 HOH HOH . 
G 6 HOH B 13 313 52 HOH HOH . 
G 6 HOH B 14 314 74 HOH HOH . 
G 6 HOH B 15 315 81 HOH HOH . 
G 6 HOH B 16 316 59 HOH HOH . 
G 6 HOH B 17 317 62 HOH HOH . 
G 6 HOH B 18 318 2 HOH HOH . 
G 6 HOH B 19 319 25 HOH HOH . 
G 6 HOH B 20 320 4 HOH HOH . 
G 6 HOH B 21 321 8 HOH HOH . 
G 6 HOH B 22 322 14 HOH HOH . 
G 6 HOH B 23 323 18 HOH HOH . 
G 6 HOH B 24 324 51 HOH HOH . 
G 6 HOH B 25 325 34 HOH HOH . 
G 6 HOH B 26 326 66 HOH HOH . 
G 6 HOH B 27 327 17 HOH HOH . 
G 6 HOH B 28 328 32 HOH HOH . 
G 6 HOH B 29 329 38 HOH HOH . 
G 6 HOH B 30 330 115 HOH HOH . 
G 6 HOH B 31 331 15 HOH HOH . 
G 6 HOH B 32 332 29 HOH HOH . 
G 6 HOH B 33 333 113 HOH HOH . 
G 6 HOH B 34 334 12 HOH HOH . 
G 6 HOH B 35 335 3 HOH HOH . 
G 6 HOH B 36 336 20 HOH HOH . 
G 6 HOH B 37 337 42 HOH HOH . 
G 6 HOH B 38 338 89 HOH HOH . 
G 6 HOH B 39 339 5 HOH HOH . 
G 6 HOH B 40 340 70 HOH HOH . 
G 6 HOH B 41 341 9 HOH HOH . 
G 6 HOH B 42 342 82 HOH HOH . 
G 6 HOH B 43 343 37 HOH HOH . 
G 6 HOH B 44 344 84 HOH HOH . 
G 6 HOH B 45 345 26 HOH HOH . 
G 6 HOH B 46 346 45 HOH HOH . 
G 6 HOH B 47 347 92 HOH HOH . 
G 6 HOH B 48 348 49 HOH HOH . 
G 6 HOH B 49 349 69 HOH HOH . 
G 6 HOH B 50 350 72 HOH HOH . 
G 6 HOH B 51 351 40 HOH HOH . 
G 6 HOH B 52 352 77 HOH HOH . 
G 6 HOH B 53 353 41 HOH HOH . 
G 6 HOH B 54 354 111 HOH HOH . 
G 6 HOH B 55 355 83 HOH HOH . 
G 6 HOH B 56 356 126 HOH HOH . 
G 6 HOH B 57 357 44 HOH HOH . 
G 6 HOH B 58 358 114 HOH HOH . 
G 6 HOH B 59 359 99 HOH HOH . 
G 6 HOH B 60 360 93 HOH HOH . 
G 6 HOH B 61 361 46 HOH HOH . 
G 6 HOH B 62 362 123 HOH HOH . 
G 6 HOH B 63 363 90 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               -51.101 
_atom_site.Cartn_y               60.072 
_atom_site.Cartn_z               19.403 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        23.59 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              74 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#