data_8EZG # _model_server_result.job_id TcmyVqKNs2CucaURIVOhIg _model_server_result.datetime_utc '2024-11-22 11:19:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ezg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 8EZG # _exptl.entry_id 8EZG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8EZG _cell.length_a 156.477 _cell.length_b 156.477 _cell.length_c 64.624 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8EZG _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 17 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc2 C O1B GDP . A GDP 201 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc3 D MG MG . A MG 202 1_555 F O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc4 D MG MG . A MG 202 1_555 F O HOH . A HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc5 D MG MG . A MG 202 1_555 F O HOH . A HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc6 D MG MG . A MG 202 1_555 F O HOH . A HOH 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc7 B OG SER 20 B SER 21 1_555 E NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc8 B O TRP 21 B TRP 22 1_555 E NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc9 B O SER 54 B SER 55 1_555 E NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? metalc ? metalc10 B OG SER 54 B SER 55 1_555 E NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? metalc ? metalc11 E NA NA . B NA 201 1_555 G O HOH . B HOH 320 12_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc12 E NA NA . B NA 201 1_555 G O HOH . B HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc13 E NA NA . B NA 201 1_555 G O HOH . B HOH 324 12_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8EZG _atom_sites.fract_transf_matrix[1][1] 0.006391 _atom_sites.fract_transf_matrix[1][2] 0.00369 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007379 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015474 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GDP A 1 201 201 GDP GDP . D 4 MG A 1 202 202 MG MG . E 5 NA B 1 201 201 NA NA . F 6 HOH A 1 301 50 HOH HOH . F 6 HOH A 2 302 102 HOH HOH . F 6 HOH A 3 303 96 HOH HOH . F 6 HOH A 4 304 31 HOH HOH . F 6 HOH A 5 305 108 HOH HOH . F 6 HOH A 6 306 85 HOH HOH . F 6 HOH A 7 307 22 HOH HOH . F 6 HOH A 8 308 87 HOH HOH . F 6 HOH A 9 309 104 HOH HOH . F 6 HOH A 10 310 36 HOH HOH . F 6 HOH A 11 311 75 HOH HOH . F 6 HOH A 12 312 116 HOH HOH . F 6 HOH A 13 313 28 HOH HOH . F 6 HOH A 14 314 109 HOH HOH . F 6 HOH A 15 315 103 HOH HOH . F 6 HOH A 16 316 79 HOH HOH . F 6 HOH A 17 317 27 HOH HOH . F 6 HOH A 18 318 35 HOH HOH . F 6 HOH A 19 319 95 HOH HOH . F 6 HOH A 20 320 7 HOH HOH . F 6 HOH A 21 321 60 HOH HOH . F 6 HOH A 22 322 56 HOH HOH . F 6 HOH A 23 323 91 HOH HOH . F 6 HOH A 24 324 23 HOH HOH . F 6 HOH A 25 325 119 HOH HOH . F 6 HOH A 26 326 6 HOH HOH . F 6 HOH A 27 327 11 HOH HOH . F 6 HOH A 28 328 67 HOH HOH . F 6 HOH A 29 329 58 HOH HOH . F 6 HOH A 30 330 121 HOH HOH . F 6 HOH A 31 331 54 HOH HOH . F 6 HOH A 32 332 43 HOH HOH . F 6 HOH A 33 333 124 HOH HOH . F 6 HOH A 34 334 10 HOH HOH . F 6 HOH A 35 335 97 HOH HOH . F 6 HOH A 36 336 57 HOH HOH . F 6 HOH A 37 337 78 HOH HOH . F 6 HOH A 38 338 118 HOH HOH . F 6 HOH A 39 339 107 HOH HOH . F 6 HOH A 40 340 61 HOH HOH . F 6 HOH A 41 341 80 HOH HOH . F 6 HOH A 42 342 64 HOH HOH . F 6 HOH A 43 343 30 HOH HOH . F 6 HOH A 44 344 24 HOH HOH . F 6 HOH A 45 345 71 HOH HOH . F 6 HOH A 46 346 63 HOH HOH . F 6 HOH A 47 347 65 HOH HOH . F 6 HOH A 48 348 105 HOH HOH . F 6 HOH A 49 349 48 HOH HOH . F 6 HOH A 50 350 47 HOH HOH . F 6 HOH A 51 351 117 HOH HOH . F 6 HOH A 52 352 120 HOH HOH . F 6 HOH A 53 353 94 HOH HOH . F 6 HOH A 54 354 100 HOH HOH . F 6 HOH A 55 355 106 HOH HOH . F 6 HOH A 56 356 33 HOH HOH . F 6 HOH A 57 357 39 HOH HOH . F 6 HOH A 58 358 125 HOH HOH . F 6 HOH A 59 359 101 HOH HOH . F 6 HOH A 60 360 98 HOH HOH . F 6 HOH A 61 361 88 HOH HOH . F 6 HOH A 62 362 110 HOH HOH . F 6 HOH A 63 363 122 HOH HOH . G 6 HOH B 1 301 1 HOH HOH . G 6 HOH B 2 302 19 HOH HOH . G 6 HOH B 3 303 86 HOH HOH . G 6 HOH B 4 304 73 HOH HOH . G 6 HOH B 5 305 76 HOH HOH . G 6 HOH B 6 306 13 HOH HOH . G 6 HOH B 7 307 53 HOH HOH . G 6 HOH B 8 308 112 HOH HOH . G 6 HOH B 9 309 55 HOH HOH . G 6 HOH B 10 310 68 HOH HOH . G 6 HOH B 11 311 21 HOH HOH . G 6 HOH B 12 312 16 HOH HOH . G 6 HOH B 13 313 52 HOH HOH . G 6 HOH B 14 314 74 HOH HOH . G 6 HOH B 15 315 81 HOH HOH . G 6 HOH B 16 316 59 HOH HOH . G 6 HOH B 17 317 62 HOH HOH . G 6 HOH B 18 318 2 HOH HOH . G 6 HOH B 19 319 25 HOH HOH . G 6 HOH B 20 320 4 HOH HOH . G 6 HOH B 21 321 8 HOH HOH . G 6 HOH B 22 322 14 HOH HOH . G 6 HOH B 23 323 18 HOH HOH . G 6 HOH B 24 324 51 HOH HOH . G 6 HOH B 25 325 34 HOH HOH . G 6 HOH B 26 326 66 HOH HOH . G 6 HOH B 27 327 17 HOH HOH . G 6 HOH B 28 328 32 HOH HOH . G 6 HOH B 29 329 38 HOH HOH . G 6 HOH B 30 330 115 HOH HOH . G 6 HOH B 31 331 15 HOH HOH . G 6 HOH B 32 332 29 HOH HOH . G 6 HOH B 33 333 113 HOH HOH . G 6 HOH B 34 334 12 HOH HOH . G 6 HOH B 35 335 3 HOH HOH . G 6 HOH B 36 336 20 HOH HOH . G 6 HOH B 37 337 42 HOH HOH . G 6 HOH B 38 338 89 HOH HOH . G 6 HOH B 39 339 5 HOH HOH . G 6 HOH B 40 340 70 HOH HOH . G 6 HOH B 41 341 9 HOH HOH . G 6 HOH B 42 342 82 HOH HOH . G 6 HOH B 43 343 37 HOH HOH . G 6 HOH B 44 344 84 HOH HOH . G 6 HOH B 45 345 26 HOH HOH . G 6 HOH B 46 346 45 HOH HOH . G 6 HOH B 47 347 92 HOH HOH . G 6 HOH B 48 348 49 HOH HOH . G 6 HOH B 49 349 69 HOH HOH . G 6 HOH B 50 350 72 HOH HOH . G 6 HOH B 51 351 40 HOH HOH . G 6 HOH B 52 352 77 HOH HOH . G 6 HOH B 53 353 41 HOH HOH . G 6 HOH B 54 354 111 HOH HOH . G 6 HOH B 55 355 83 HOH HOH . G 6 HOH B 56 356 126 HOH HOH . G 6 HOH B 57 357 44 HOH HOH . G 6 HOH B 58 358 114 HOH HOH . G 6 HOH B 59 359 99 HOH HOH . G 6 HOH B 60 360 93 HOH HOH . G 6 HOH B 61 361 46 HOH HOH . G 6 HOH B 62 362 123 HOH HOH . G 6 HOH B 63 363 90 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -63.111 _atom_site.Cartn_y 48.198 _atom_site.Cartn_z -5.179 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.42 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 1 #