data_8F0J # _model_server_result.job_id Qn3UiFAM20TY_uNfTydayA _model_server_result.datetime_utc '2024-11-21 22:28:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8f0j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":505}' # _entry.id 8F0J # _exptl.entry_id 8F0J _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8F0J _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8F0J _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 10 L N N ? 10 Q N N ? 10 R N N ? 10 S N N ? 10 T N N ? 10 U N N ? 10 V N N ? 10 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 P CYS 2 1_555 A SG CYS 7 P CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 B SG CYS 63 R CYS 55 1_555 B SG CYS 89 R CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 B SG CYS 80 R CYS 72 1_555 B SG CYS 120 R CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 103 R CYS 95 1_555 B SG CYS 142 R CYS 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 B SG CYS 227 R CYS 219 1_555 B SG CYS 297 R CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 F SG CYS 22 N CYS 22 1_555 F SG CYS 96 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 F SG CYS 99 N CYS 99 1_555 F SG CYS 107 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A NZ LYS 21 P LYS 21 1_555 G C07 D6M . P D6M 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale2 A C TYR 37 P TYR 37 1_555 A N NH2 38 P NH2 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 B ND2 ASN 81 R ASN 73 1_555 H C1 NAG . R NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale4 B ND2 ASN 138 R ASN 130 1_555 I C1 NAG . R NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 496 n n C1 O2 PLM doub 497 n n C1 C2 PLM sing 498 n n O1 H PLM sing 499 n n C2 C3 PLM sing 500 n n C2 H21 PLM sing 501 n n C2 H22 PLM sing 502 n n C3 C4 PLM sing 503 n n C3 H31 PLM sing 504 n n C3 H32 PLM sing 505 n n C4 C5 PLM sing 506 n n C4 H41 PLM sing 507 n n C4 H42 PLM sing 508 n n C5 C6 PLM sing 509 n n C5 H51 PLM sing 510 n n C5 H52 PLM sing 511 n n C6 C7 PLM sing 512 n n C6 H61 PLM sing 513 n n C6 H62 PLM sing 514 n n C7 C8 PLM sing 515 n n C7 H71 PLM sing 516 n n C7 H72 PLM sing 517 n n C8 C9 PLM sing 518 n n C8 H81 PLM sing 519 n n C8 H82 PLM sing 520 n n C9 CA PLM sing 521 n n C9 H91 PLM sing 522 n n C9 H92 PLM sing 523 n n CA CB PLM sing 524 n n CA HA1 PLM sing 525 n n CA HA2 PLM sing 526 n n CB CC PLM sing 527 n n CB HB1 PLM sing 528 n n CB HB2 PLM sing 529 n n CC CD PLM sing 530 n n CC HC1 PLM sing 531 n n CC HC2 PLM sing 532 n n CD CE PLM sing 533 n n CD HD1 PLM sing 534 n n CD HD2 PLM sing 535 n n CE CF PLM sing 536 n n CE HE1 PLM sing 537 n n CE HE2 PLM sing 538 n n CF CG PLM sing 539 n n CF HF1 PLM sing 540 n n CF HF2 PLM sing 541 n n CG HG1 PLM sing 542 n n CG HG2 PLM sing 543 n n CG HG3 PLM sing 544 n n # _atom_sites.entry_id 8F0J _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 D6M P 1 101 21 D6M L6M . H 8 NAG R 1 501 410 NAG NAG . I 8 NAG R 1 502 411 NAG NAG . J 9 PTY R 1 503 1 PTY PTY . K 9 PTY R 1 504 2 PTY PTY . L 10 PLM R 1 505 4 PLM PLM . M 11 Y01 R 1 506 5 Y01 Y01 . N 11 Y01 R 1 507 6 Y01 Y01 . O 9 PTY R 1 508 7 PTY PTY . P 12 P42 R 1 509 8 P42 P42 . Q 10 PLM R 1 510 9 PLM PLM . R 10 PLM R 1 511 10 PLM PLM . S 10 PLM R 1 512 11 PLM PLM . T 10 PLM R 1 513 12 PLM PLM . U 10 PLM R 1 514 13 PLM PLM . V 10 PLM R 1 515 14 PLM PLM . W 10 PLM R 1 516 15 PLM PLM . X 13 HOH P 1 201 10 HOH HOH . X 13 HOH P 2 202 17 HOH HOH . X 13 HOH P 3 203 15 HOH HOH . X 13 HOH P 4 204 14 HOH HOH . X 13 HOH P 5 205 16 HOH HOH . X 13 HOH P 6 206 19 HOH HOH . X 13 HOH P 7 207 9 HOH HOH . X 13 HOH P 8 208 1 HOH HOH . X 13 HOH P 9 209 18 HOH HOH . X 13 HOH P 10 210 20 HOH HOH . Y 13 HOH R 1 601 22 HOH HOH . Y 13 HOH R 2 602 2 HOH HOH . Y 13 HOH R 3 603 28 HOH HOH . Y 13 HOH R 4 604 21 HOH HOH . Y 13 HOH R 5 605 6 HOH HOH . Y 13 HOH R 6 606 24 HOH HOH . Y 13 HOH R 7 607 3 HOH HOH . Y 13 HOH R 8 608 29 HOH HOH . Y 13 HOH R 9 609 7 HOH HOH . Y 13 HOH R 10 610 26 HOH HOH . Y 13 HOH R 11 611 27 HOH HOH . Y 13 HOH R 12 612 8 HOH HOH . Y 13 HOH R 13 613 23 HOH HOH . Y 13 HOH R 14 614 4 HOH HOH . Z 13 HOH A 1 401 25 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . L 10 94.841 110.276 90.121 1 19.16 ? C1 PLM 505 R 1 HETATM 2 O O1 PLM . . . L 10 95.076 109.053 90.047 1 19.79 ? O1 PLM 505 R 1 HETATM 3 O O2 PLM . . . L 10 94.328 110.817 91.121 1 24.13 ? O2 PLM 505 R 1 HETATM 4 C C2 PLM . . . L 10 95.185 111.155 88.931 1 20.84 ? C2 PLM 505 R 1 HETATM 5 C C3 PLM . . . L 10 96.622 111.144 88.501 1 18.69 ? C3 PLM 505 R 1 HETATM 6 C C4 PLM . . . L 10 97.009 109.87 87.768 1 21.69 ? C4 PLM 505 R 1 HETATM 7 C C5 PLM . . . L 10 98.41 109.879 87.209 1 18.9 ? C5 PLM 505 R 1 HETATM 8 C C6 PLM . . . L 10 98.739 108.691 86.34 1 19.05 ? C6 PLM 505 R 1 HETATM 9 C C7 PLM . . . L 10 100.1 108.758 85.695 1 16.66 ? C7 PLM 505 R 1 HETATM 10 C C8 PLM . . . L 10 100.359 107.673 84.679 1 15.38 ? C8 PLM 505 R 1 HETATM 11 C C9 PLM . . . L 10 101.714 107.757 84.021 1 20.08 ? C9 PLM 505 R 1 HETATM 12 C CA PLM . . . L 10 101.963 106.701 82.972 1 15.87 ? CA PLM 505 R 1 HETATM 13 C CB PLM . . . L 10 103.35 106.738 82.38 1 19.06 ? CB PLM 505 R 1 HETATM 14 C CC PLM . . . L 10 103.615 105.677 81.34 1 18.18 ? CC PLM 505 R 1 HETATM 15 C CD PLM . . . L 10 102.758 105.791 80.105 1 21.31 ? CD PLM 505 R 1 HETATM 16 C CE PLM . . . L 10 103.054 104.756 79.048 1 19.8 ? CE PLM 505 R 1 HETATM 17 C CF PLM . . . L 10 102.214 104.891 77.804 1 21.4 ? CF PLM 505 R 1 HETATM 18 C CG PLM . . . L 10 102.533 103.873 76.737 1 19.25 ? CG PLM 505 R 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 18 #